RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 TIMM17BO60830 172 aa7.98□□□□□ -1.13
PTCH1-204ENST00000375290 NDPQ00604 133 aa7.98□□□□□ -1.13
PTCH1-204ENST00000375290 TMEM219Q86XT9 240 aa7.98□□□□□ -1.13
PTCH1-204ENST00000375290 A0A1B0GX51 115 aa7.98□□□□□ -1.13
PTCH1-204ENST00000375290 APOC4P55056 127 aa7.98□□□□□ -1.13
PTCH1-204ENST00000375290 ATG2AQ2TAZ0 1938 aa7.98□□□□□ -1.13
PTCH1-204ENST00000375290 MCRIP2Q9BUT9 160 aaKnown RBP7.98□□□□□ -1.13
PTCH1-204ENST00000375290 TRBV10-1A0A0K0K1A3 114 aa7.98□□□□□ -1.13
PTCH1-204ENST00000375290 BUB3O43684 328 aa7.98□□□□□ -1.13
PTCH1-204ENST00000375290 BAALCQ8WXS3 180 aa7.98□□□□□ -1.13
PTCH1-204ENST00000375290 AGPAT4-IT1Q9H0P7 198 aa7.98□□□□□ -1.13
PTCH1-204ENST00000375290 SS18L2Q9UHA2 77 aa7.98□□□□□ -1.13
PTCH1-204ENST00000375290 DYNAPQ8N1N2 210 aa7.97□□□□□ -1.13
PTCH1-204ENST00000375290 MLANAQ16655 118 aa7.97□□□□□ -1.13
PTCH1-204ENST00000375290 Q9H8V8 135 aa7.97□□□□□ -1.13
PTCH1-204ENST00000375290 U3KQK5 164 aa7.97□□□□□ -1.13
PTCH1-204ENST00000375290 A0A0U1RRA0 63 aa7.97□□□□□ -1.13
PTCH1-204ENST00000375290 MLST8Q9BVC4 326 aa7.97□□□□□ -1.13
PTCH1-204ENST00000375290 PLA2G2EQ9NZK7 142 aa7.97□□□□□ -1.13
PTCH1-204ENST00000375290 PSMB8P28062 276 aa7.97□□□□□ -1.13
PTCH1-204ENST00000375290 TRAV26-1A0A087WT03 109 aa7.96□□□□□ -1.13
PTCH1-204ENST00000375290 SAP30O75446 220 aa7.96□□□□□ -1.13
PTCH1-204ENST00000375290 GTF3C1Q12789 2109 aa7.96□□□□□ -1.13
PTCH1-204ENST00000375290 C2orf16Q68DN1 1984 aa7.96□□□□□ -1.13
PTCH1-204ENST00000375290 C11orf53Q8IXP5 236 aa7.96□□□□□ -1.13
PTCH1-204ENST00000375290 HCFC1P51610 2035 aa7.96□□□□□ -1.14
PTCH1-204ENST00000375290 IGKV1-17P01599 117 aa7.96□□□□□ -1.14
PTCH1-204ENST00000375290 HIST2H2BCQ6DN03 193 aa7.96□□□□□ -1.14
PTCH1-204ENST00000375290 HIST2H2BDQ6DRA6 164 aa7.96□□□□□ -1.14
PTCH1-204ENST00000375290 MALRD1Q5VYJ5 2156 aa7.96□□□□□ -1.14
PTCH1-204ENST00000375290 TRBV30A0A0K0K1B3 111 aa7.96□□□□□ -1.14
PTCH1-204ENST00000375290 MSMBP08118 114 aa7.96□□□□□ -1.14
PTCH1-204ENST00000375290 IGLV2-14P01704 120 aa7.96□□□□□ -1.14
PTCH1-204ENST00000375290 MIAQ16674 131 aa7.95□□□□□ -1.14
PTCH1-204ENST00000375290 NUPR1O60356 82 aa7.95□□□□□ -1.14
PTCH1-204ENST00000375290 TINCRA0A1B0GVN0 87 aa7.95□□□□□ -1.14
PTCH1-204ENST00000375290 K7EIM0 57 aa7.95□□□□□ -1.14
PTCH1-204ENST00000375290 DPH3Q96FX2 82 aa7.95□□□□□ -1.14
PTCH1-204ENST00000375290 TRAV25A0A0B4J276 109 aa7.95□□□□□ -1.14
PTCH1-204ENST00000375290 MBD6Q96DN6 1003 aa7.95□□□□□ -1.14
PTCH1-204ENST00000375290 CD24P25063 80 aa7.95□□□□□ -1.14
PTCH1-204ENST00000375290 UNQ6494/PRO21346Q6UXR6 183 aa7.95□□□□□ -1.14
PTCH1-204ENST00000375290 M0QXV9 152 aa7.95□□□□□ -1.14
PTCH1-204ENST00000375290 NSUN5P1Q3KNT7 163 aa7.95□□□□□ -1.14
PTCH1-204ENST00000375290 LYPD2Q6UXB3 125 aa7.95□□□□□ -1.14
PTCH1-204ENST00000375290 TRAV26-2A0A0B4J265 109 aa7.94□□□□□ -1.14
PTCH1-204ENST00000375290 IGFL2Q6UWQ7 119 aa7.94□□□□□ -1.14
PTCH1-204ENST00000375290 SND1-IT1Q9HBX3 110 aa7.94□□□□□ -1.14
PTCH1-204ENST00000375290 EML5Q05BV3 1969 aa7.94□□□□□ -1.14
PTCH1-204ENST00000375290 COX7A2LO14548 114 aa7.94□□□□□ -1.14
PTCH1-204ENST00000375290 E7EQL1 145 aa7.94□□□□□ -1.14
PTCH1-204ENST00000375290 WFDC2Q14508 124 aa7.94□□□□□ -1.14
PTCH1-204ENST00000375290 MUSTN1Q8IVN3 82 aa7.94□□□□□ -1.14
PTCH1-204ENST00000375290 MED13Q9UHV7 2174 aa7.94□□□□□ -1.14
PTCH1-204ENST00000375290 MED12LQ86YW9 2145 aa7.94□□□□□ -1.14
PTCH1-204ENST00000375290 PLCE1Q9P212 2302 aa7.94□□□□□ -1.14
PTCH1-204ENST00000375290 LYRM9A8MSI8 78 aa7.94□□□□□ -1.14
PTCH1-204ENST00000375290 NDUFB1O75438 58 aa7.94□□□□□ -1.14
PTCH1-204ENST00000375290 FAM222AQ5U5X8 452 aa7.94□□□□□ -1.14
PTCH1-204ENST00000375290 C16orf74Q96GX8 76 aa7.94□□□□□ -1.14
PTCH1-204ENST00000375290 LTBP2Q14767 1821 aa7.94□□□□□ -1.14
PTCH1-204ENST00000375290 TFF1P04155 84 aa7.93□□□□□ -1.14
PTCH1-204ENST00000375290 ZNRF2Q8NHG8 242 aa7.93□□□□□ -1.14
PTCH1-204ENST00000375290 C3orf22Q8N5N4 141 aa7.93□□□□□ -1.14
PTCH1-204ENST00000375290 C1orf43Q9BWL3 253 aa7.93□□□□□ -1.14
PTCH1-204ENST00000375290 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.93□□□□□ -1.141e-6■■■■□ 23.7
PTCH1-204ENST00000375290 LINC00205P59089 165 aa7.93□□□□□ -1.14
PTCH1-204ENST00000375290 ZGRF1Q86YA3 2104 aa7.93□□□□□ -1.14
PTCH1-204ENST00000375290 TRBV7-3A0A075B6L6 115 aa7.93□□□□□ -1.14
PTCH1-204ENST00000375290 PIK3CD-AS1Q5SR53 167 aa7.93□□□□□ -1.14
PTCH1-204ENST00000375290 LINC00527Q9UJ94 153 aa7.93□□□□□ -1.14
PTCH1-204ENST00000375290 NOTCH4Q99466 2003 aa7.92□□□□□ -1.14
PTCH1-204ENST00000375290 CTSGP08311 255 aa7.92□□□□□ -1.14
PTCH1-204ENST00000375290 DEFB131AP59861 70 aa7.92□□□□□ -1.14
PTCH1-204ENST00000375290 SPINK13Q1W4C9 94 aa7.92□□□□□ -1.14
PTCH1-204ENST00000375290 COX7B2Q8TF08 81 aa7.92□□□□□ -1.14
PTCH1-204ENST00000375290 CNFNQ9BYD5 112 aa7.92□□□□□ -1.14
PTCH1-204ENST00000375290 PRR30Q53SZ7 412 aaPredicted RBP7.92□□□□□ -1.14
PTCH1-204ENST00000375290 IGHV3-73A0A0B4J1V6 119 aa7.92□□□□□ -1.14
PTCH1-204ENST00000375290 K7EQD1 137 aa7.92□□□□□ -1.14
PTCH1-204ENST00000375290 SUMO4Q6EEV6 95 aa7.92□□□□□ -1.14
PTCH1-204ENST00000375290 C20orf203Q8NBC4 194 aa7.92□□□□□ -1.14
PTCH1-204ENST00000375290 MSRB2Q9Y3D2 182 aa7.92□□□□□ -1.14
PTCH1-204ENST00000375290 A0A0J9YX75 114 aa7.92□□□□□ -1.14
PTCH1-204ENST00000375290 KLHL30-AS1Q8NEE0 82 aa7.92□□□□□ -1.14
PTCH1-204ENST00000375290 MRAPQ8TCY5 172 aa7.92□□□□□ -1.14
PTCH1-204ENST00000375290 NBL1P41271 181 aa7.92□□□□□ -1.14
PTCH1-204ENST00000375290 NEXN-AS1Q8NBZ9 246 aa7.92□□□□□ -1.14
PTCH1-204ENST00000375290 LRRC75A-AS1Q8N1F1 130 aa7.92□□□□□ -1.14
PTCH1-204ENST00000375290 DAND5Q8N907 189 aa7.91□□□□□ -1.14
PTCH1-204ENST00000375290 TEX22C9J3V5 150 aa7.91□□□□□ -1.14
PTCH1-204ENST00000375290 PATE2Q6UY27 113 aa7.91□□□□□ -1.14
PTCH1-204ENST00000375290 C10orf105Q8TEF2 133 aa7.91□□□□□ -1.14
PTCH1-204ENST00000375290 ARFGEF3Q5TH69 2177 aa7.91□□□□□ -1.14
PTCH1-204ENST00000375290 IGLC6P0CF74 106 aa7.91□□□□□ -1.14
PTCH1-204ENST00000375290 GPHB5Q86YW7 130 aa7.91□□□□□ -1.14
PTCH1-204ENST00000375290 SPRY4Q9C004 299 aa7.91□□□□□ -1.14
PTCH1-204ENST00000375290 MRPL36Q9P0J6 103 aaKnown RBP7.91□□□□□ -1.14
PTCH1-204ENST00000375290 UBE2BP63146 152 aa7.91□□□□□ -1.14
PTCH1-204ENST00000375290 NDUFA7O95182 113 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms