RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 GAGE4Q13068 117 aa9□□□□□ -0.97
PTCH1-203ENST00000375274 GAGE5Q13069 117 aa9□□□□□ -0.97
PTCH1-203ENST00000375274 NPBQ8NG41 125 aa9□□□□□ -0.97
PTCH1-203ENST00000375274 IGHV3-38A0A0C4DH36 116 aa9□□□□□ -0.97
PTCH1-203ENST00000375274 C19orf71A6NCJ1 209 aa9□□□□□ -0.97
PTCH1-203ENST00000375274 WISP2O76076 250 aa9□□□□□ -0.97
PTCH1-203ENST00000375274 CGB3P0DN86 165 aa9□□□□□ -0.97
PTCH1-203ENST00000375274 CGB7P0DN87 165 aa9□□□□□ -0.97
PTCH1-203ENST00000375274 SH2D6Q7Z4S9 175 aa9□□□□□ -0.97
PTCH1-203ENST00000375274 TLN1Q9Y490 2541 aaKnown RBP9□□□□□ -0.97
PTCH1-203ENST00000375274 DSCAML1Q8TD84 2053 aa9□□□□□ -0.97
PTCH1-203ENST00000375274 IGLL5B9A064 214 aa9□□□□□ -0.97
PTCH1-203ENST00000375274 IGLV2-8P01709 118 aa9□□□□□ -0.97
PTCH1-203ENST00000375274 FXYD2P54710 66 aa9□□□□□ -0.97
PTCH1-203ENST00000375274 ATP6V0BQ99437 205 aa9□□□□□ -0.97
PTCH1-203ENST00000375274 CENPVL3A0A0U1RRI6 287 aa8.99□□□□□ -0.97
PTCH1-203ENST00000375274 INAFM2P0DMQ5 153 aa8.99□□□□□ -0.97
PTCH1-203ENST00000375274 ZNRF2Q8NHG8 242 aa8.99□□□□□ -0.97
PTCH1-203ENST00000375274 LAMTOR3Q9UHA4 124 aa8.99□□□□□ -0.97
PTCH1-203ENST00000375274 TNRC6AQ8NDV7 1962 aaKnown RBP8.99□□□□□ -0.97
PTCH1-203ENST00000375274 VWC2LB2RUY7 222 aa8.99□□□□□ -0.97
PTCH1-203ENST00000375274 CRYGCP07315 174 aa8.99□□□□□ -0.97
PTCH1-203ENST00000375274 SRSF2Q01130 221 aaKnown RBP8.99□□□□□ -0.97
PTCH1-203ENST00000375274 DPH3Q96FX2 82 aa8.99□□□□□ -0.97
PTCH1-203ENST00000375274 DEFB130BP0DP73 79 aa8.99□□□□□ -0.97
PTCH1-203ENST00000375274 DEFB130AP0DP74 79 aa8.99□□□□□ -0.97
PTCH1-203ENST00000375274 HOXB4P17483 251 aaPredicted RBP8.99□□□□□ -0.97
PTCH1-203ENST00000375274 BOD1L2Q8IYS8 172 aa8.99□□□□□ -0.97
PTCH1-203ENST00000375274 MAPK1IP1LQ8NDC0 245 aa8.98□□□□□ -0.97
PTCH1-203ENST00000375274 RPL39LQ96EH5 51 aaKnown RBP8.98□□□□□ -0.97
PTCH1-203ENST00000375274 DNAJC30Q96LL9 226 aa8.98□□□□□ -0.97
PTCH1-203ENST00000375274 IGKV1D-37A0A075B6S9 117 aa8.98□□□□□ -0.97
PTCH1-203ENST00000375274 A0A1B0GXF2 115 aa8.98□□□□□ -0.97
PTCH1-203ENST00000375274 NTN5Q8WTR8 489 aaPredicted RBP8.98□□□□□ -0.97
PTCH1-203ENST00000375274 SPANXA1Q9NS26 97 aa8.98□□□□□ -0.97
PTCH1-203ENST00000375274 CCDC168Q8NDH2 2452 aa8.98□□□□□ -0.97
PTCH1-203ENST00000375274 CFC1BP0CG36 223 aa8.98□□□□□ -0.97
PTCH1-203ENST00000375274 CFC1P0CG37 223 aa8.98□□□□□ -0.97
PTCH1-203ENST00000375274 FOXI2Q6ZQN5 318 aa8.98□□□□□ -0.97
PTCH1-203ENST00000375274 EDA2RQ9HAV5 297 aa8.98□□□□□ -0.97
PTCH1-203ENST00000375274 SPAG8Q99932 426 aaPredicted RBP8.97□□□□□ -0.97
PTCH1-203ENST00000375274 TMEM131Q92545 1883 aa8.97□□□□□ -0.97
PTCH1-203ENST00000375274 PRAC2D3DTV9 90 aa8.97□□□□□ -0.97
PTCH1-203ENST00000375274 WI2-2373I1.2A0A1W2PRP0 233 aa8.97□□□□□ -0.97
PTCH1-203ENST00000375274 RNF223E7ERA6 249 aa8.97□□□□□ -0.97
PTCH1-203ENST00000375274 RHOHQ15669 191 aa8.97□□□□□ -0.97
PTCH1-203ENST00000375274 RNASE13Q5GAN3 156 aaKnown RBP8.97□□□□□ -0.97
PTCH1-203ENST00000375274 HIGD1BQ9P298 99 aa8.97□□□□□ -0.97
PTCH1-203ENST00000375274 H3BUA1 57 aa8.97□□□□□ -0.97
PTCH1-203ENST00000375274 CTRLP40313 264 aa8.97□□□□□ -0.97
PTCH1-203ENST00000375274 SS18Q15532 418 aa8.97□□□□□ -0.97
PTCH1-203ENST00000375274 LINC00322Q6ZN03 302 aaPredicted RBP8.97□□□□□ -0.97
PTCH1-203ENST00000375274 GOLGB1Q14789 3259 aaKnown RBP8.96□□□□□ -0.97
PTCH1-203ENST00000375274 UTF1Q5T230 341 aa8.96□□□□□ -0.97
PTCH1-203ENST00000375274 LINC01619G3V211 115 aa8.96□□□□□ -0.97
PTCH1-203ENST00000375274 PFN2P35080 140 aa8.96□□□□□ -0.97
PTCH1-203ENST00000375274 CARD19Q96LW7 228 aa8.96□□□□□ -0.97
PTCH1-203ENST00000375274 Q8N9W7 124 aa8.96□□□□□ -0.98
PTCH1-203ENST00000375274 LTBP2Q14767 1821 aa8.95□□□□□ -0.98
PTCH1-203ENST00000375274 NAV3Q8IVL0 2385 aa8.95□□□□□ -0.98
PTCH1-203ENST00000375274 TRBV6-1A0A0K0K1D8 114 aa8.95□□□□□ -0.98
PTCH1-203ENST00000375274 GDF5OSQ5U4N7 250 aa8.95□□□□□ -0.98
PTCH1-203ENST00000375274 ZNF48Q96MX3 618 aaPredicted RBP8.95□□□□□ -0.98
PTCH1-203ENST00000375274 EIF4EBP1Q13541 118 aaPredicted RBP8.95□□□□□ -0.98
PTCH1-203ENST00000375274 WFDC2Q14508 124 aa8.95□□□□□ -0.98
PTCH1-203ENST00000375274 SPATA12Q7Z6I5 190 aa8.95□□□□□ -0.98
PTCH1-203ENST00000375274 CFHR3Q02985 330 aa8.95□□□□□ -0.98
PTCH1-203ENST00000375274 TMEM243Q9BU79 118 aa8.95□□□□□ -0.98
PTCH1-203ENST00000375274 MLST8Q9BVC4 326 aa8.95□□□□□ -0.98
PTCH1-203ENST00000375274 ODF1Q14990 250 aa8.95□□□□□ -0.98
PTCH1-203ENST00000375274 C9orf153Q5TBE3 101 aa8.95□□□□□ -0.98
PTCH1-203ENST00000375274 ELANEP08246 267 aa8.94□□□□□ -0.98
PTCH1-203ENST00000375274 MBD6Q96DN6 1003 aa8.94□□□□□ -0.98
PTCH1-203ENST00000375274 SOCS3O14543 225 aa8.94□□□□□ -0.98
PTCH1-203ENST00000375274 IFITM1P13164 125 aa8.94□□□□□ -0.98
PTCH1-203ENST00000375274 HERVK_113P63121 156 aa8.94□□□□□ -0.98
PTCH1-203ENST00000375274 LINC00574Q9H8X3 128 aa8.94□□□□□ -0.98
PTCH1-203ENST00000375274 TP53TG3Q9ULZ0 132 aa8.94□□□□□ -0.98
PTCH1-203ENST00000375274 GAGE7O76087 117 aa8.93□□□□□ -0.98
PTCH1-203ENST00000375274 GAGE12FP0CL80 117 aa8.93□□□□□ -0.98
PTCH1-203ENST00000375274 GAGE12GP0CL81 117 aa8.93□□□□□ -0.98
PTCH1-203ENST00000375274 GAGE12IP0CL82 117 aa8.93□□□□□ -0.98
PTCH1-203ENST00000375274 LOXL1Q08397 574 aaPredicted RBP8.93□□□□□ -0.98
PTCH1-203ENST00000375274 ZFP2Q6ZN57 461 aa8.93□□□□□ -0.98
PTCH1-203ENST00000375274 C1orf229Q6ZS94 237 aaPredicted RBP8.93□□□□□ -0.98
PTCH1-203ENST00000375274 FANCD2OSQ96PS1 177 aa8.93□□□□□ -0.98
PTCH1-203ENST00000375274 C16orf54Q6UWD8 224 aa8.93□□□□□ -0.98
PTCH1-203ENST00000375274 NAV2Q8IVL1 2488 aa8.93□□□□□ -0.98
PTCH1-203ENST00000375274 IGF2RP11717 2491 aa8.93□□□□□ -0.98
PTCH1-203ENST00000375274 A0A0J9YXV3 536 aa8.93□□□□□ -0.98
PTCH1-203ENST00000375274 PIEZO1Q92508 2521 aa8.92□□□□□ -0.98
PTCH1-203ENST00000375274 SUMO4Q6EEV6 95 aa8.92□□□□□ -0.98
PTCH1-203ENST00000375274 IGF2-ASQ6U949 168 aa8.92□□□□□ -0.98
PTCH1-203ENST00000375274 HCFC1P51610 2035 aa8.92□□□□□ -0.98
PTCH1-203ENST00000375274 A4D1N5 150 aa8.92□□□□□ -0.98
PTCH1-203ENST00000375274 Q8N7P7 452 aa8.92□□□□□ -0.98
PTCH1-203ENST00000375274 C15orf53Q8NAA6 179 aa8.92□□□□□ -0.98
PTCH1-203ENST00000375274 AJUBAQ96IF1 538 aa8.92□□□□□ -0.98
PTCH1-203ENST00000375274 TRAV12-1A0A0B4J245 112 aa8.92□□□□□ -0.98
PTCH1-203ENST00000375274 BLCAPP62952 87 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms