RNA–Protein interactions for RNA: ENST00000373571.5

HDAC8-206, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-206ENST00000373571 FLNCQ14315 2725 aa12.53□□□□□ -0.4
HDAC8-206ENST00000373571 IGSF10Q6WRI0 2623 aa12.53□□□□□ -0.4
HDAC8-206ENST00000373571 A0A096LNT2 108 aa12.52□□□□□ -0.4
HDAC8-206ENST00000373571 C9orf118A6NHY6 69 aa12.52□□□□□ -0.4
HDAC8-206ENST00000373571 USP9XQ93008 2570 aaPredicted RBP12.52□□□□□ -0.41
HDAC8-206ENST00000373571 TMEM89A2RUT3 159 aa12.52□□□□□ -0.41
HDAC8-206ENST00000373571 K7EMI3 77 aa12.52□□□□□ -0.41
HDAC8-206ENST00000373571 TGFAP01135 160 aa12.52□□□□□ -0.41
HDAC8-206ENST00000373571 PLNP26678 52 aa12.52□□□□□ -0.41
HDAC8-206ENST00000373571 SCGB3A1Q96QR1 104 aa12.52□□□□□ -0.41
HDAC8-206ENST00000373571 CSMD2Q7Z408 3487 aa12.52□□□□□ -0.41
HDAC8-206ENST00000373571 MAP1AP78559 2803 aaPredicted RBP12.51□□□□□ -0.41
HDAC8-206ENST00000373571 TRAV12-1A0A0B4J245 112 aa12.51□□□□□ -0.41
HDAC8-206ENST00000373571 J3QLI3 93 aa12.51□□□□□ -0.41
HDAC8-206ENST00000373571 HLA-DRB4P13762 266 aa12.51□□□□□ -0.41
HDAC8-206ENST00000373571 CHAC1Q9BUX1 264 aa12.51□□□□□ -0.41
HDAC8-206ENST00000373571 HLA-DRB4X5D2U9 266 aa12.51□□□□□ -0.41
HDAC8-206ENST00000373571 TRAV12-3A0A0B4J271 114 aa12.5□□□□□ -0.41
HDAC8-206ENST00000373571 H7C1H1 209 aa12.5□□□□□ -0.41
HDAC8-206ENST00000373571 PPP1R17O96001 155 aa12.5□□□□□ -0.41
HDAC8-206ENST00000373571 ZNF688P0C7X2 276 aa12.5□□□□□ -0.41
HDAC8-206ENST00000373571 POM121L12Q8N7R1 296 aa12.5□□□□□ -0.41
HDAC8-206ENST00000373571 MUC4Q99102 2169 aa12.5□□□□□ -0.41
HDAC8-206ENST00000373571 TRBV25-1A0A075B6N4 114 aa12.5□□□□□ -0.41
HDAC8-206ENST00000373571 F8VRH5 84 aa12.5□□□□□ -0.41
HDAC8-206ENST00000373571 KIF25-AS1Q9Y6Z4 181 aa12.5□□□□□ -0.41
HDAC8-206ENST00000373571 CRYBG3Q68DQ2 2970 aa12.49□□□□□ -0.41
HDAC8-206ENST00000373571 H3BUT2 72 aa12.49□□□□□ -0.41
HDAC8-206ENST00000373571 CD7P09564 240 aa12.49□□□□□ -0.41
HDAC8-206ENST00000373571 GCSHP23434 173 aa12.49□□□□□ -0.41
HDAC8-206ENST00000373571 C2orf66Q6UXQ4 117 aa12.49□□□□□ -0.41
HDAC8-206ENST00000373571 RAB37Q96AX2 223 aa12.49□□□□□ -0.41
HDAC8-206ENST00000373571 JMJD8Q96S16 334 aa12.49□□□□□ -0.41
HDAC8-206ENST00000373571 CSTL1Q9H114 145 aa12.49□□□□□ -0.41
HDAC8-206ENST00000373571 CSPG4Q6UVK1 2322 aa12.49□□□□□ -0.41
HDAC8-206ENST00000373571 CBY1Q9Y3M2 126 aa12.49□□□□□ -0.41
HDAC8-206ENST00000373571 CHTOPQ9Y3Y2 248 aaKnown RBP12.49□□□□□ -0.41
HDAC8-206ENST00000373571 LINC00315P59091 139 aa12.48□□□□□ -0.41
HDAC8-206ENST00000373571 SNRPD3P62318 126 aaKnown RBP12.48□□□□□ -0.41
HDAC8-206ENST00000373571 NEXN-AS1Q8NBZ9 246 aa12.48□□□□□ -0.41
HDAC8-206ENST00000373571 VPREB3Q9UKI3 123 aa12.48□□□□□ -0.41
HDAC8-206ENST00000373571 UTP20O75691 2785 aaKnown RBP12.48□□□□□ -0.41
HDAC8-206ENST00000373571 GAGE10A6NGK3 116 aa12.47□□□□□ -0.41
HDAC8-206ENST00000373571 NAA38Q9BRA0 125 aaKnown RBP12.47□□□□□ -0.41
HDAC8-206ENST00000373571 JPT2Q9H910 190 aa12.47□□□□□ -0.41
HDAC8-206ENST00000373571 A0A0J9YX75 114 aa12.47□□□□□ -0.41
HDAC8-206ENST00000373571 IGKV3-20P01619 116 aa12.47□□□□□ -0.41
HDAC8-206ENST00000373571 PRB1P04280 392 aa12.47□□□□□ -0.41
HDAC8-206ENST00000373571 COX6B1P14854 86 aa12.47□□□□□ -0.41
HDAC8-206ENST00000373571 FXYD2P54710 66 aa12.47□□□□□ -0.41
HDAC8-206ENST00000373571 SYNJ2BPP57105 145 aa12.47□□□□□ -0.41
HDAC8-206ENST00000373571 NEGR1Q7Z3B1 354 aa12.47□□□□□ -0.41
HDAC8-206ENST00000373571 MAPKAPK5-AS1Q8N8E1 139 aa12.47□□□□□ -0.41
HDAC8-206ENST00000373571 ODF3Q96PU9 254 aa12.47□□□□□ -0.41
HDAC8-206ENST00000373571 K7EQG2 157 aa12.46□□□□□ -0.41
HDAC8-206ENST00000373571 LGALS1P09382 135 aaKnown RBP12.46□□□□□ -0.41
HDAC8-206ENST00000373571 BAALCQ8WXS3 180 aa12.46□□□□□ -0.41
HDAC8-206ENST00000373571 TRAV12-2A0A075B6T6 113 aa12.46□□□□□ -0.42
HDAC8-206ENST00000373571 IGHV4OR15-8A0A075B7B6 117 aa12.46□□□□□ -0.42
HDAC8-206ENST00000373571 A0A087WW49 117 aa12.46□□□□□ -0.42
HDAC8-206ENST00000373571 A0A087WWL8 130 aa12.46□□□□□ -0.42
HDAC8-206ENST00000373571 SUMO4Q6EEV6 95 aa12.46□□□□□ -0.42
HDAC8-206ENST00000373571 GTF2H5Q6ZYL4 71 aa12.46□□□□□ -0.42
HDAC8-206ENST00000373571 GAGE12BA1L429 117 aa12.45□□□□□ -0.42
HDAC8-206ENST00000373571 SMIM13P0DJ93 91 aa12.45□□□□□ -0.42
HDAC8-206ENST00000373571 CST9LQ9H4G1 147 aa12.45□□□□□ -0.42
HDAC8-206ENST00000373571 ELANEP08246 267 aa12.44□□□□□ -0.42
HDAC8-206ENST00000373571 RBX1P62877 108 aa12.44□□□□□ -0.42
HDAC8-206ENST00000373571 UFSP1Q6NVU6 142 aa12.44□□□□□ -0.42
HDAC8-206ENST00000373571 Q6YL49 198 aa12.44□□□□□ -0.42
HDAC8-206ENST00000373571 DUX5Q96PT3 197 aa12.44□□□□□ -0.42
HDAC8-206ENST00000373571 ZNF702PQ9H963 129 aa12.44□□□□□ -0.42
HDAC8-206ENST00000373571 IGHV3-16A0A0C4DH30 117 aa12.44□□□□□ -0.42
HDAC8-206ENST00000373571 F5H697 171 aa12.44□□□□□ -0.42
HDAC8-206ENST00000373571 LGALS9O00182 355 aa12.44□□□□□ -0.42
HDAC8-206ENST00000373571 RPL32P62910 135 aaKnown RBP12.44□□□□□ -0.42
HDAC8-206ENST00000373571 CEND1Q8N111 149 aa12.44□□□□□ -0.42
HDAC8-206ENST00000373571 C9orf85Q96MD7 179 aa12.44□□□□□ -0.42
HDAC8-206ENST00000373571 FSHBP01225 129 aa12.43□□□□□ -0.42
HDAC8-206ENST00000373571 HOXD3P31249 432 aaPredicted RBP12.43□□□□□ -0.42
HDAC8-206ENST00000373571 K7EP34 96 aa12.43□□□□□ -0.42
HDAC8-206ENST00000373571 CDKN1BP46527 198 aa12.43□□□□□ -0.42
HDAC8-206ENST00000373571 TM2D2Q9BX73 214 aa12.43□□□□□ -0.42
HDAC8-206ENST00000373571 CYSLTR1Q9Y271 337 aa12.43□□□□□ -0.42
HDAC8-206ENST00000373571 A0A1W2PPM0 123 aa12.42□□□□□ -0.42
HDAC8-206ENST00000373571 PRSS29PA6NIE9 313 aa12.42□□□□□ -0.42
HDAC8-206ENST00000373571 OR11H12B2RN74 326 aa12.42□□□□□ -0.42
HDAC8-206ENST00000373571 DUSP14O95147 198 aaKnown RBP12.42□□□□□ -0.42
HDAC8-206ENST00000373571 IGHV4-31P0DP07 118 aa12.42□□□□□ -0.42
HDAC8-206ENST00000373571 POLR2KP53803 58 aaKnown RBP12.42□□□□□ -0.42
HDAC8-206ENST00000373571 SPINK13Q1W4C9 94 aa12.42□□□□□ -0.42
HDAC8-206ENST00000373571 OR11H1Q8NG94 326 aa12.42□□□□□ -0.42
HDAC8-206ENST00000373571 OR11H2Q8NH07 326 aa12.42□□□□□ -0.42
HDAC8-206ENST00000373571 UBE2E2Q96LR5 201 aa12.42□□□□□ -0.42
HDAC8-206ENST00000373571 MDFICQ9P1T7 246 aa12.42□□□□□ -0.42
HDAC8-206ENST00000373571 ANKRD17O75179 2603 aaKnown RBP12.42□□□□□ -0.42
HDAC8-206ENST00000373571 HOXA3O43365 443 aaPredicted RBP12.41□□□□□ -0.42
HDAC8-206ENST00000373571 FAM74A4Q5TZK3 123 aa12.41□□□□□ -0.42
HDAC8-206ENST00000373571 Q8N1Y9 231 aa12.41□□□□□ -0.42
HDAC8-206ENST00000373571 BEX4Q9NWD9 120 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms