RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 PRELID3AQ96N28 172 aa11.91□□□□□ -0.5
C9orf78-201ENST00000372447 NOTCH1P46531 2555 aa11.91□□□□□ -0.5
C9orf78-201ENST00000372447 NBEAL1Q6ZS30 2694 aa11.9□□□□□ -0.5
C9orf78-201ENST00000372447 OR5AL1P0C617 328 aa11.9□□□□□ -0.5
C9orf78-201ENST00000372447 TFPI2P48307 235 aa11.9□□□□□ -0.5
C9orf78-201ENST00000372447 SNAI2O43623 268 aa11.9□□□□□ -0.51
C9orf78-201ENST00000372447 RAB4AP20338 218 aa11.9□□□□□ -0.51
C9orf78-201ENST00000372447 CKS2P33552 79 aa11.9□□□□□ -0.51
C9orf78-201ENST00000372447 RNASE4P34096 147 aaKnown RBP11.9□□□□□ -0.51
C9orf78-201ENST00000372447 EBLN2Q6P2I7 272 aa11.9□□□□□ -0.51
C9orf78-201ENST00000372447 RNF185Q96GF1 192 aa11.9□□□□□ -0.51
C9orf78-201ENST00000372447 K7EQG2 157 aa11.89□□□□□ -0.51
C9orf78-201ENST00000372447 SNRPD3P62318 126 aaKnown RBP11.89□□□□□ -0.51
C9orf78-201ENST00000372447 OR10AG1Q8NH19 301 aa11.89□□□□□ -0.51
C9orf78-201ENST00000372447 PRSS3P2Q8NHM4 247 aa11.89□□□□□ -0.51
C9orf78-201ENST00000372447 KIR2DL5BA0A0G2JN68 375 aa11.88□□□□□ -0.51
C9orf78-201ENST00000372447 KIR2DL5BA0A0G2JPC4 375 aa11.88□□□□□ -0.51
C9orf78-201ENST00000372447 ZNF688P0C7X2 276 aa11.88□□□□□ -0.51
C9orf78-201ENST00000372447 BTF3P20290 206 aaKnown RBP11.88□□□□□ -0.51
C9orf78-201ENST00000372447 TDRG1Q3Y452 100 aa11.88□□□□□ -0.51
C9orf78-201ENST00000372447 PSMG4Q5JS54 123 aa11.88□□□□□ -0.51
C9orf78-201ENST00000372447 FA2HQ7L5A8 372 aa11.88□□□□□ -0.51
C9orf78-201ENST00000372447 TMEM61Q8N0U2 210 aa11.88□□□□□ -0.51
C9orf78-201ENST00000372447 KIR2DL5AQ8N109 375 aa11.88□□□□□ -0.51
C9orf78-201ENST00000372447 AP5S1Q9NUS5 200 aa11.88□□□□□ -0.51
C9orf78-201ENST00000372447 IGHV4-4A0A075B6R2 117 aa11.87□□□□□ -0.51
C9orf78-201ENST00000372447 KRTAP10-11P60412 298 aa11.87□□□□□ -0.51
C9orf78-201ENST00000372447 CACNG7P62955 275 aa11.87□□□□□ -0.51
C9orf78-201ENST00000372447 DEFA6Q01524 100 aa11.87□□□□□ -0.51
C9orf78-201ENST00000372447 EGFEM1PQ0D2K5 195 aa11.87□□□□□ -0.51
C9orf78-201ENST00000372447 VAMP8Q9BV40 100 aa11.87□□□□□ -0.51
C9orf78-201ENST00000372447 KLLNB2CW77 178 aa11.87□□□□□ -0.51
C9orf78-201ENST00000372447 SMKR1H3BMG3 65 aa11.87□□□□□ -0.51
C9orf78-201ENST00000372447 H3BVH4 76 aa11.87□□□□□ -0.51
C9orf78-201ENST00000372447 LEPROTL1O95214 131 aa11.87□□□□□ -0.51
C9orf78-201ENST00000372447 PPBPP02775 128 aa11.87□□□□□ -0.51
C9orf78-201ENST00000372447 IFI27P40305 119 aaPredicted RBP11.87□□□□□ -0.51
C9orf78-201ENST00000372447 KIR3DS1Q14943 382 aa11.87□□□□□ -0.51
C9orf78-201ENST00000372447 BEAN1Q3B7T3 259 aa11.87□□□□□ -0.51
C9orf78-201ENST00000372447 SPANXN1Q5VSR9 72 aa11.87□□□□□ -0.51
C9orf78-201ENST00000372447 OR2K2Q8NGT1 345 aa11.87□□□□□ -0.51
C9orf78-201ENST00000372447 LOC389332A0A1B0GUA5 103 aa11.86□□□□□ -0.51
C9orf78-201ENST00000372447 NCR2O95944 276 aa11.86□□□□□ -0.51
C9orf78-201ENST00000372447 ANXA2RQ3ZCQ2 193 aa11.86□□□□□ -0.51
C9orf78-201ENST00000372447 SMIM15Q7Z3B0 74 aa11.86□□□□□ -0.51
C9orf78-201ENST00000372447 SORL1Q92673 2214 aa11.86□□□□□ -0.51
C9orf78-201ENST00000372447 NPYP01303 97 aa11.85□□□□□ -0.51
C9orf78-201ENST00000372447 ASIPP42127 132 aa11.85□□□□□ -0.51
C9orf78-201ENST00000372447 KPRPQ5T749 579 aaPredicted RBP11.85□□□□□ -0.51
C9orf78-201ENST00000372447 TMEM70Q9BUB7 260 aa11.85□□□□□ -0.51
C9orf78-201ENST00000372447 PAM16Q9Y3D7 125 aa11.85□□□□□ -0.51
C9orf78-201ENST00000372447 TRAV25A0A0B4J276 109 aa11.84□□□□□ -0.51
C9orf78-201ENST00000372447 A0A0J9YX75 114 aa11.84□□□□□ -0.51
C9orf78-201ENST00000372447 EVI2AP22794 236 aa11.84□□□□□ -0.51
C9orf78-201ENST00000372447 S100A4P26447 101 aaKnown RBP11.84□□□□□ -0.51
C9orf78-201ENST00000372447 CTAG1AP78358 180 aa11.84□□□□□ -0.51
C9orf78-201ENST00000372447 DNAH3Q8TD57 4116 aa11.84□□□□□ -0.51
C9orf78-201ENST00000372447 ODF3Q96PU9 254 aa11.84□□□□□ -0.51
C9orf78-201ENST00000372447 LAMTOR2Q9Y2Q5 125 aa11.84□□□□□ -0.51
C9orf78-201ENST00000372447 LINC00173Q6ZV60 143 aa11.84□□□□□ -0.51
C9orf78-201ENST00000372447 C14orf144Q96I85 54 aa11.84□□□□□ -0.51
C9orf78-201ENST00000372447 C20orf144Q9BQM9 153 aa11.84□□□□□ -0.51
C9orf78-201ENST00000372447 HSPB8Q9UJY1 196 aa11.84□□□□□ -0.51
C9orf78-201ENST00000372447 TIMM8BQ9Y5J9 83 aaPredicted RBP11.84□□□□□ -0.51
C9orf78-201ENST00000372447 CRXO43186 299 aaPredicted RBP11.83□□□□□ -0.52
C9orf78-201ENST00000372447 MED14OSP0DP75 135 aa11.83□□□□□ -0.52
C9orf78-201ENST00000372447 LEPP41159 167 aa11.83□□□□□ -0.52
C9orf78-201ENST00000372447 ZNF256Q9Y2P7 627 aaPredicted RBP11.83□□□□□ -0.52
C9orf78-201ENST00000372447 NDUFAF3Q9BU61 184 aa11.82□□□□□ -0.52
C9orf78-201ENST00000372447 ZMAT5Q9UDW3 170 aaKnown RBP11.82□□□□□ -0.52
C9orf78-201ENST00000372447 SYS1-DBNDD2H3BUS1 97 aa11.82□□□□□ -0.52
C9orf78-201ENST00000372447 GNRH2O43555 120 aa11.82□□□□□ -0.52
C9orf78-201ENST00000372447 GAS8-AS1O95177 125 aa11.82□□□□□ -0.52
C9orf78-201ENST00000372447 PRB2P02812 416 aaPredicted RBP11.82□□□□□ -0.52
C9orf78-201ENST00000372447 SPAG8Q99932 426 aaPredicted RBP11.82□□□□□ -0.52
C9orf78-201ENST00000372447 MAP1LC3AQ9H492 121 aa11.82□□□□□ -0.52
C9orf78-201ENST00000372447 SCRT2Q9NQ03 307 aa11.82□□□□□ -0.52
C9orf78-201ENST00000372447 DUSP14O95147 198 aaKnown RBP11.81□□□□□ -0.52
C9orf78-201ENST00000372447 TNFRSF6BO95407 300 aa11.81□□□□□ -0.52
C9orf78-201ENST00000372447 FOXI2Q6ZQN5 318 aa11.81□□□□□ -0.52
C9orf78-201ENST00000372447 SPATA12Q7Z6I5 190 aa11.81□□□□□ -0.52
C9orf78-201ENST00000372447 MAP1LC3CQ9BXW4 147 aa11.81□□□□□ -0.52
C9orf78-201ENST00000372447 PHLDA3Q9Y5J5 127 aa11.81□□□□□ -0.52
C9orf78-201ENST00000372447 C7orf71A4D174 169 aa11.8□□□□□ -0.52
C9orf78-201ENST00000372447 M0R381 172 aa11.8□□□□□ -0.52
C9orf78-201ENST00000372447 RNASE3P12724 160 aaKnown RBP11.8□□□□□ -0.52
C9orf78-201ENST00000372447 SPATA45Q537H7 98 aa11.8□□□□□ -0.52
C9orf78-201ENST00000372447 FAM159AQ6UWV7 190 aa11.8□□□□□ -0.52
C9orf78-201ENST00000372447 A0A096LNJ9 63 aa11.79□□□□□ -0.52
C9orf78-201ENST00000372447 TRAV12-3A0A0B4J271 114 aa11.79□□□□□ -0.52
C9orf78-201ENST00000372447 IGKV3-20P01619 116 aa11.79□□□□□ -0.52
C9orf78-201ENST00000372447 ATOH7Q8N100 152 aa11.79□□□□□ -0.52
C9orf78-201ENST00000372447 TRAV2A0A0B4J234 112 aa11.79□□□□□ -0.52
C9orf78-201ENST00000372447 CD7P09564 240 aa11.79□□□□□ -0.52
C9orf78-201ENST00000372447 GATA1P15976 413 aaPredicted RBP11.79□□□□□ -0.52
C9orf78-201ENST00000372447 PET117Q6UWS5 81 aa11.79□□□□□ -0.52
C9orf78-201ENST00000372447 C20orf202A1L168 122 aa11.78□□□□□ -0.52
C9orf78-201ENST00000372447 LINC01546A6NGU7 62 aa11.78□□□□□ -0.52
C9orf78-201ENST00000372447 OR4C46A6NHA9 309 aa11.78□□□□□ -0.52
C9orf78-201ENST00000372447 SPRY2O43597 315 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms