RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 HBDP02042 147 aa7.82□□□□□ -1.16
COL5A1-202ENST00000371820 CTSGP08311 255 aa7.82□□□□□ -1.16
COL5A1-202ENST00000371820 COX8AP10176 69 aa7.82□□□□□ -1.16
COL5A1-202ENST00000371820 CKS2P33552 79 aa7.82□□□□□ -1.16
COL5A1-202ENST00000371820 HINT1P49773 126 aaPredicted RBP7.82□□□□□ -1.16
COL5A1-202ENST00000371820 SYNJ2BPP57105 145 aa7.82□□□□□ -1.16
COL5A1-202ENST00000371820 C15orf32Q32M92 178 aa7.82□□□□□ -1.16
COL5A1-202ENST00000371820 LYZL1Q6UWQ5 148 aa7.82□□□□□ -1.16
COL5A1-202ENST00000371820 MAP1LC3AQ9H492 121 aa7.82□□□□□ -1.16
COL5A1-202ENST00000371820 SCRT2Q9NQ03 307 aa7.82□□□□□ -1.16
COL5A1-202ENST00000371820 SIGLEC8Q9NYZ4 499 aa7.82□□□□□ -1.16
COL5A1-202ENST00000371820 A6NDN8 102 aa7.81□□□□□ -1.16
COL5A1-202ENST00000371820 LINC01546A6NGU7 62 aa7.81□□□□□ -1.16
COL5A1-202ENST00000371820 LINC01549A6NIU2 74 aa7.81□□□□□ -1.16
COL5A1-202ENST00000371820 H3BTX0 84 aa7.81□□□□□ -1.16
COL5A1-202ENST00000371820 CRIP1P50238 77 aa7.81□□□□□ -1.16
COL5A1-202ENST00000371820 CACNG7P62955 275 aa7.81□□□□□ -1.16
COL5A1-202ENST00000371820 OR2K2Q8NGT1 345 aa7.81□□□□□ -1.16
COL5A1-202ENST00000371820 CNFNQ9BYD5 112 aa7.81□□□□□ -1.16
COL5A1-202ENST00000371820 HUWE1Q7Z6Z7 4374 aaKnown RBP7.81□□□□□ -1.16
COL5A1-202ENST00000371820 DYNC2H1Q8NCM8 4307 aaKnown RBP7.8□□□□□ -1.16
COL5A1-202ENST00000371820 PRSS47A8MTI9 375 aa7.8□□□□□ -1.16
COL5A1-202ENST00000371820 K7EMI3 77 aa7.8□□□□□ -1.16
COL5A1-202ENST00000371820 ATP5LO75964 103 aa7.8□□□□□ -1.16
COL5A1-202ENST00000371820 TRBV12-3P01733 135 aa7.8□□□□□ -1.16
COL5A1-202ENST00000371820 IGLC6P0CF74 106 aa7.8□□□□□ -1.16
COL5A1-202ENST00000371820 GPR183P32249 361 aa7.8□□□□□ -1.16
COL5A1-202ENST00000371820 TWIST1Q15672 202 aa7.8□□□□□ -1.16
COL5A1-202ENST00000371820 GTSCR1Q86UQ5 136 aa7.8□□□□□ -1.16
COL5A1-202ENST00000371820 ATOH7Q8N100 152 aa7.8□□□□□ -1.16
COL5A1-202ENST00000371820 DEFB125Q8N687 156 aa7.8□□□□□ -1.16
COL5A1-202ENST00000371820 ZNF502Q8TBZ5 544 aa7.8□□□□□ -1.16
COL5A1-202ENST00000371820 C17orf77Q96MU5 243 aa7.8□□□□□ -1.16
COL5A1-202ENST00000371820 AP1S3Q96PC3 154 aa7.8□□□□□ -1.16
COL5A1-202ENST00000371820 METTL26Q96S19 204 aa7.8□□□□□ -1.16
COL5A1-202ENST00000371820 K7EP13 123 aa7.79□□□□□ -1.16
COL5A1-202ENST00000371820 NUDT3O95989 172 aa7.79□□□□□ -1.16
COL5A1-202ENST00000371820 CSN3P07498 182 aa7.79□□□□□ -1.16
COL5A1-202ENST00000371820 MRPL51Q4U2R6 128 aaKnown RBP7.79□□□□□ -1.16
COL5A1-202ENST00000371820 TMEM78Q5T7P6 136 aa7.79□□□□□ -1.16
COL5A1-202ENST00000371820 SAMD13Q5VXD3 122 aa7.79□□□□□ -1.16
COL5A1-202ENST00000371820 DYNLRB2Q8TF09 96 aa7.79□□□□□ -1.16
COL5A1-202ENST00000371820 RYR2Q92736 4967 aa7.78□□□□□ -1.16
COL5A1-202ENST00000371820 TRBV7-9A0A0J9YWB2 115 aa7.78□□□□□ -1.16
COL5A1-202ENST00000371820 D6R8Y8 96 aa7.78□□□□□ -1.16
COL5A1-202ENST00000371820 F8W735 103 aaPredicted RBP7.78□□□□□ -1.16
COL5A1-202ENST00000371820 LGALS9O00182 355 aa7.78□□□□□ -1.16
COL5A1-202ENST00000371820 BUB3O43684 328 aa7.78□□□□□ -1.16
COL5A1-202ENST00000371820 PPP1R17O96001 155 aa7.78□□□□□ -1.16
COL5A1-202ENST00000371820 ORM1P02763 201 aa7.78□□□□□ -1.16
COL5A1-202ENST00000371820 NPSP0C0P6 89 aa7.78□□□□□ -1.16
COL5A1-202ENST00000371820 FCER1GP30273 86 aa7.78□□□□□ -1.16
COL5A1-202ENST00000371820 ARL3P36405 182 aa7.78□□□□□ -1.16
COL5A1-202ENST00000371820 VAMP3Q15836 100 aa7.78□□□□□ -1.16
COL5A1-202ENST00000371820 FAM106AQ4KMX7 169 aa7.78□□□□□ -1.16
COL5A1-202ENST00000371820 GPHB5Q86YW7 130 aa7.78□□□□□ -1.16
COL5A1-202ENST00000371820 OR4C5Q8NGB2 326 aa7.78□□□□□ -1.16
COL5A1-202ENST00000371820 IFI27L1Q96BM0 104 aa7.78□□□□□ -1.16
COL5A1-202ENST00000371820 LINC00477Q96M19 166 aa7.78□□□□□ -1.16
COL5A1-202ENST00000371820 TPPP3Q9BW30 176 aa7.78□□□□□ -1.16
COL5A1-202ENST00000371820 ZMAT4Q9H898 229 aa7.78□□□□□ -1.16
COL5A1-202ENST00000371820 OR2T8A6NH00 312 aa7.77□□□□□ -1.17
COL5A1-202ENST00000371820 A8MZ25 164 aa7.77□□□□□ -1.17
COL5A1-202ENST00000371820 C3orf84H3BNL1 204 aa7.77□□□□□ -1.17
COL5A1-202ENST00000371820 M0R3E3 92 aa7.77□□□□□ -1.17
COL5A1-202ENST00000371820 IFI27P40305 119 aaPredicted RBP7.77□□□□□ -1.17
COL5A1-202ENST00000371820 TFPI2P48307 235 aa7.77□□□□□ -1.17
COL5A1-202ENST00000371820 ZNF138P52744 262 aa7.77□□□□□ -1.17
COL5A1-202ENST00000371820 TMEM97Q5BJF2 176 aa7.77□□□□□ -1.17
COL5A1-202ENST00000371820 BVES-AS1Q5T3Y7 98 aa7.77□□□□□ -1.17
COL5A1-202ENST00000371820 CLEC19AQ6UXS0 136 aa7.77□□□□□ -1.17
COL5A1-202ENST00000371820 C9orf47Q6ZRZ4 202 aa7.77□□□□□ -1.17
COL5A1-202ENST00000371820 GTF2H5Q6ZYL4 71 aa7.77□□□□□ -1.17
COL5A1-202ENST00000371820 C8orf49Q96NF6 230 aa7.77□□□□□ -1.17
COL5A1-202ENST00000371820 DNAH7Q8WXX0 4024 aa7.76□□□□□ -1.17
COL5A1-202ENST00000371820 IGHV4-4A0A075B6R2 117 aa7.76□□□□□ -1.17
COL5A1-202ENST00000371820 H3BRM9 83 aa7.76□□□□□ -1.17
COL5A1-202ENST00000371820 CLEC3BP05452 202 aa7.76□□□□□ -1.17
COL5A1-202ENST00000371820 HLA-DRB4P13762 266 aa7.76□□□□□ -1.17
COL5A1-202ENST00000371820 MPV17L2Q567V2 206 aa7.76□□□□□ -1.17
COL5A1-202ENST00000371820 BOD1L2Q8IYS8 172 aa7.76□□□□□ -1.17
COL5A1-202ENST00000371820 Q8N8P6 123 aa7.76□□□□□ -1.17
COL5A1-202ENST00000371820 CCDC140Q96MF4 163 aa7.76□□□□□ -1.17
COL5A1-202ENST00000371820 U3KQE9 123 aa7.76□□□□□ -1.17
COL5A1-202ENST00000371820 HLA-DRB4X5D2U9 266 aa7.76□□□□□ -1.17
COL5A1-202ENST00000371820 hDV102S1A0JD36 115 aa7.75□□□□□ -1.17
COL5A1-202ENST00000371820 IGHV3-23P01764 117 aa7.75□□□□□ -1.17
COL5A1-202ENST00000371820 IGHV4-30-4P0DP06 118 aa7.75□□□□□ -1.17
COL5A1-202ENST00000371820 MED14OSP0DP75 135 aa7.75□□□□□ -1.17
COL5A1-202ENST00000371820 HSD52Q0P140 79 aa7.75□□□□□ -1.17
COL5A1-202ENST00000371820 MAJINQ3KP22 176 aa7.75□□□□□ -1.17
COL5A1-202ENST00000371820 AMN1Q8IY45 258 aa7.75□□□□□ -1.17
COL5A1-202ENST00000371820 Q8N1Y9 231 aa7.75□□□□□ -1.17
COL5A1-202ENST00000371820 MRAP2Q96G30 205 aa7.75□□□□□ -1.17
COL5A1-202ENST00000371820 ZFAND3Q9H8U3 227 aa7.75□□□□□ -1.17
COL5A1-202ENST00000371820 HIGD1BQ9P298 99 aa7.75□□□□□ -1.17
COL5A1-202ENST00000371820 SACSQ9NZJ4 4579 aa7.75□□□□□ -1.17
COL5A1-202ENST00000371820 SORL1Q92673 2214 aa7.75□□□□□ -1.17
COL5A1-202ENST00000371820 IGKV2-40A0A087WW87 121 aaPredicted RBP7.74□□□□□ -1.17
COL5A1-202ENST00000371820 LOC389332A0A1B0GUA5 103 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms