RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 SLC25A20O43772 301 aa12.85□□□□□ -0.35
DKC1-201ENST00000369550 C16orf92Q96LL3 132 aa12.85□□□□□ -0.35
DKC1-201ENST00000369550 METTL26Q96S19 204 aa12.85□□□□□ -0.35
DKC1-201ENST00000369550 CLPSL1A2RUU4 121 aa12.85□□□□□ -0.35
DKC1-201ENST00000369550 C9JAW5 83 aa12.85□□□□□ -0.35
DKC1-201ENST00000369550 IGHV3-30P01768 117 aa12.85□□□□□ -0.35
DKC1-201ENST00000369550 IGHV3-30-5P0DP03 117 aa12.85□□□□□ -0.35
DKC1-201ENST00000369550 TMEM170BQ5T4T1 132 aa12.85□□□□□ -0.35
DKC1-201ENST00000369550 LY6G5BQ8NDX9 201 aa12.85□□□□□ -0.35
DKC1-201ENST00000369550 APC2O95996 2303 aa12.85□□□□□ -0.35
DKC1-201ENST00000369550 IGF1P05019 195 aa12.84□□□□□ -0.35
DKC1-201ENST00000369550 PAPPA-AS1Q5QFB9 102 aa12.84□□□□□ -0.35
DKC1-201ENST00000369550 CACNA1BQ00975 2339 aa12.84□□□□□ -0.35
DKC1-201ENST00000369550 ANKRD11Q6UB99 2663 aaPredicted RBP12.84□□□□□ -0.35
DKC1-201ENST00000369550 SNCGO76070 127 aa12.84□□□□□ -0.35
DKC1-201ENST00000369550 CRYGDP07320 174 aa12.84□□□□□ -0.35
DKC1-201ENST00000369550 CD3EP07766 207 aa12.84□□□□□ -0.35
DKC1-201ENST00000369550 MRPL53Q96EL3 112 aaKnown RBP12.84□□□□□ -0.35
DKC1-201ENST00000369550 TP53TG1Q9Y2A0 90 aa12.84□□□□□ -0.35
DKC1-201ENST00000369550 BSNQ9UPA5 3926 aa12.84□□□□□ -0.35
DKC1-201ENST00000369550 ASIPP42127 132 aa12.83□□□□□ -0.35
DKC1-201ENST00000369550 IGLV4-69A0A075B6H9 119 aa12.83□□□□□ -0.36
DKC1-201ENST00000369550 H7C2G1 150 aa12.83□□□□□ -0.36
DKC1-201ENST00000369550 LY6HO94772 140 aa12.83□□□□□ -0.36
DKC1-201ENST00000369550 GAGE2BQ13066 116 aa12.83□□□□□ -0.36
DKC1-201ENST00000369550 GAGE2EQ4V326 116 aa12.83□□□□□ -0.36
DKC1-201ENST00000369550 GAGE2DQ9UEU5 116 aa12.83□□□□□ -0.36
DKC1-201ENST00000369550 ODF3BA8MYP8 253 aa12.82□□□□□ -0.36
DKC1-201ENST00000369550 SLC25A29Q8N8R3 303 aa12.82□□□□□ -0.36
DKC1-201ENST00000369550 TIMD4Q96H15 378 aa12.82□□□□□ -0.36
DKC1-201ENST00000369550 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.82□□□□□ -0.36
DKC1-201ENST00000369550 RNF223E7ERA6 249 aa12.82□□□□□ -0.36
DKC1-201ENST00000369550 K7ENP7 123 aa12.82□□□□□ -0.36
DKC1-201ENST00000369550 TRPT1Q86TN4 253 aaKnown RBP12.82□□□□□ -0.36
DKC1-201ENST00000369550 CITED1Q99966 193 aa12.82□□□□□ -0.36
DKC1-201ENST00000369550 ATMQ13315 3056 aa12.82□□□□□ -0.36
DKC1-201ENST00000369550 PPP1R17O96001 155 aa12.81□□□□□ -0.36
DKC1-201ENST00000369550 TSPEAR-AS2P59090 65 aa12.81□□□□□ -0.36
DKC1-201ENST00000369550 PMVKQ15126 192 aa12.81□□□□□ -0.36
DKC1-201ENST00000369550 ANXA2RQ3ZCQ2 193 aa12.81□□□□□ -0.36
DKC1-201ENST00000369550 VMO1Q7Z5L0 202 aa12.81□□□□□ -0.36
DKC1-201ENST00000369550 TRAV21A0A0B4J279 112 aa12.8□□□□□ -0.36
DKC1-201ENST00000369550 CENPVL3A0A0U1RRI6 287 aa12.8□□□□□ -0.36
DKC1-201ENST00000369550 TSHBP01222 138 aa12.8□□□□□ -0.36
DKC1-201ENST00000369550 CRIP2P52943 208 aaPredicted RBP12.8□□□□□ -0.36
DKC1-201ENST00000369550 Q8N6K4 173 aa12.8□□□□□ -0.36
DKC1-201ENST00000369550 FAM110DQ8TAY7 271 aaPredicted RBP12.8□□□□□ -0.36
DKC1-201ENST00000369550 AJUBAQ96IF1 538 aa12.8□□□□□ -0.36
DKC1-201ENST00000369550 CCDC140Q96MF4 163 aa12.8□□□□□ -0.36
DKC1-201ENST00000369550 LRBAP50851 2863 aa12.8□□□□□ -0.36
DKC1-201ENST00000369550 LGALS3P17931 250 aaKnown RBP12.8□□□□□ -0.36
DKC1-201ENST00000369550 SRD5A1P18405 259 aa12.8□□□□□ -0.36
DKC1-201ENST00000369550 M0R1W7 72 aa12.79□□□□□ -0.36
DKC1-201ENST00000369550 RHODO00212 210 aa12.79□□□□□ -0.36
DKC1-201ENST00000369550 ABCA4P78363 2273 aa12.79□□□□□ -0.36
DKC1-201ENST00000369550 RPL39P62891 51 aaKnown RBP12.79□□□□□ -0.36
DKC1-201ENST00000369550 Q1RN00 199 aa12.79□□□□□ -0.36
DKC1-201ENST00000369550 TTC32Q5I0X7 151 aa12.79□□□□□ -0.36
DKC1-201ENST00000369550 PTPRZ1P23471 2315 aaPredicted RBP12.79□□□□□ -0.36
DKC1-201ENST00000369550 PIEZO2Q9H5I5 2752 aa12.79□□□□□ -0.36
DKC1-201ENST00000369550 TRAV4A0A0B4J268 109 aa12.78□□□□□ -0.36
DKC1-201ENST00000369550 A4D1N5 150 aa12.78□□□□□ -0.36
DKC1-201ENST00000369550 J3QQQ9 107 aa12.78□□□□□ -0.36
DKC1-201ENST00000369550 ATP6V0E1O15342 81 aa12.78□□□□□ -0.36
DKC1-201ENST00000369550 NHLRC4P0CG21 123 aaPredicted RBP12.78□□□□□ -0.36
DKC1-201ENST00000369550 NDUFV3P56181 108 aaKnown RBP12.78□□□□□ -0.36
DKC1-201ENST00000369550 Q8N9W7 124 aa12.78□□□□□ -0.36
DKC1-201ENST00000369550 IGHV1-69DA0A0B4J2H0 117 aa12.78□□□□□ -0.36
DKC1-201ENST00000369550 GPHB5Q86YW7 130 aa12.78□□□□□ -0.36
DKC1-201ENST00000369550 OR10J6PQ8NGY7 276 aa12.78□□□□□ -0.36
DKC1-201ENST00000369550 ACACAQ13085 2346 aa12.78□□□□□ -0.36
DKC1-201ENST00000369550 IGIPA6NJ69 53 aa12.77□□□□□ -0.36
DKC1-201ENST00000369550 EEF1AKMT3Q96AZ1 226 aa12.77□□□□□ -0.36
DKC1-201ENST00000369550 C20orf173Q96LM9 149 aa12.77□□□□□ -0.36
DKC1-201ENST00000369550 LENEPQ9Y5L5 61 aa12.77□□□□□ -0.36
DKC1-201ENST00000369550 G3V318 75 aa12.77□□□□□ -0.37
DKC1-201ENST00000369550 GNRH2O43555 120 aa12.77□□□□□ -0.37
DKC1-201ENST00000369550 RNASE4P34096 147 aaKnown RBP12.77□□□□□ -0.37
DKC1-201ENST00000369550 ZFAND2AQ8N6M9 145 aa12.77□□□□□ -0.37
DKC1-201ENST00000369550 NTN5Q8WTR8 489 aaPredicted RBP12.77□□□□□ -0.37
DKC1-201ENST00000369550 SVEP1Q4LDE5 3571 aa12.77□□□□□ -0.37
DKC1-201ENST00000369550 DCHS2Q6V1P9 2916 aa12.77□□□□□ -0.37
DKC1-201ENST00000369550 CRLF1O75462 422 aa12.76□□□□□ -0.37
DKC1-201ENST00000369550 PRR30Q53SZ7 412 aaPredicted RBP12.76□□□□□ -0.37
DKC1-201ENST00000369550 C9orf139Q6ZV77 190 aa12.76□□□□□ -0.37
DKC1-201ENST00000369550 LINC00477Q96M19 166 aa12.76□□□□□ -0.37
DKC1-201ENST00000369550 TRAV2A0A0B4J234 112 aa12.76□□□□□ -0.37
DKC1-201ENST00000369550 GAGE12JA6NER3 117 aa12.76□□□□□ -0.37
DKC1-201ENST00000369550 GAGE7O76087 117 aa12.76□□□□□ -0.37
DKC1-201ENST00000369550 GAGE12FP0CL80 117 aa12.76□□□□□ -0.37
DKC1-201ENST00000369550 GAGE12GP0CL81 117 aa12.76□□□□□ -0.37
DKC1-201ENST00000369550 GAGE12IP0CL82 117 aa12.76□□□□□ -0.37
DKC1-201ENST00000369550 DEFB1P60022 68 aa12.76□□□□□ -0.37
DKC1-201ENST00000369550 GAGE4Q13068 117 aa12.76□□□□□ -0.37
DKC1-201ENST00000369550 ZNRF2Q8NHG8 242 aa12.76□□□□□ -0.37
DKC1-201ENST00000369550 IFITM1P13164 125 aa12.76□□□□□ -0.37
DKC1-201ENST00000369550 LINC01560Q8TB33 94 aa12.76□□□□□ -0.37
DKC1-201ENST00000369550 TMEM141Q96I45 108 aa12.76□□□□□ -0.37
DKC1-201ENST00000369550 IGHV3-33P01772 117 aa12.75□□□□□ -0.37
DKC1-201ENST00000369550 EBI3Q14213 229 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms