RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 K7EQG2 157 aa10.53□□□□□ -0.72
USF1-202ENST00000368020 HOXD3P31249 432 aaPredicted RBP10.53□□□□□ -0.72
USF1-202ENST00000368020 MAJINQ3KP22 176 aa10.53□□□□□ -0.72
USF1-202ENST00000368020 ANXA2RQ3ZCQ2 193 aa10.53□□□□□ -0.72
USF1-202ENST00000368020 SLC25A34Q6PIV7 304 aa10.53□□□□□ -0.72
USF1-202ENST00000368020 FAM159AQ6UWV7 190 aa10.53□□□□□ -0.72
USF1-202ENST00000368020 GOLT1BQ9Y3E0 138 aa10.53□□□□□ -0.72
USF1-202ENST00000368020 INAFM1C9JVW0 142 aa10.52□□□□□ -0.73
USF1-202ENST00000368020 H0Y8G0 127 aa10.52□□□□□ -0.73
USF1-202ENST00000368020 M0R381 172 aa10.52□□□□□ -0.73
USF1-202ENST00000368020 NXPH4O95158 308 aa10.52□□□□□ -0.73
USF1-202ENST00000368020 SYNJ2BPP57105 145 aa10.52□□□□□ -0.73
USF1-202ENST00000368020 C10orf99Q6UWK7 81 aa10.52□□□□□ -0.73
USF1-202ENST00000368020 OR1N2Q8NGR9 330 aa10.52□□□□□ -0.73
USF1-202ENST00000368020 IGHV4OR15-8A0A075B7B6 117 aa10.51□□□□□ -0.73
USF1-202ENST00000368020 A0A087WW49 117 aa10.51□□□□□ -0.73
USF1-202ENST00000368020 TRAV2A0A0B4J234 112 aa10.51□□□□□ -0.73
USF1-202ENST00000368020 F6UB75 175 aa10.51□□□□□ -0.73
USF1-202ENST00000368020 J3KRW8 73 aa10.51□□□□□ -0.73
USF1-202ENST00000368020 CRLF1O75462 422 aa10.51□□□□□ -0.73
USF1-202ENST00000368020 NRACQ8N912 160 aa10.51□□□□□ -0.73
USF1-202ENST00000368020 ZNF418Q8TF45 676 aaPredicted RBP10.51□□□□□ -0.73
USF1-202ENST00000368020 WFDC12Q8WWY7 111 aa10.51□□□□□ -0.73
USF1-202ENST00000368020 C20orf78Q9BR46 151 aa10.51□□□□□ -0.73
USF1-202ENST00000368020 PEMTQ9UBM1 199 aa10.51□□□□□ -0.73
USF1-202ENST00000368020 TEP1Q99973 2627 aaKnown RBP10.51□□□□□ -0.73
USF1-202ENST00000368020 A0A0J9YX75 114 aa10.5□□□□□ -0.73
USF1-202ENST00000368020 C7orf71A4D174 169 aa10.5□□□□□ -0.73
USF1-202ENST00000368020 ATP5LO75964 103 aa10.5□□□□□ -0.73
USF1-202ENST00000368020 LAGE3Q14657 143 aa10.5□□□□□ -0.73
USF1-202ENST00000368020 C4orf3Q8WVX3 66 aa10.5□□□□□ -0.73
USF1-202ENST00000368020 IGLV2-18A0A075B6J9 118 aa10.5□□□□□ -0.73
USF1-202ENST00000368020 HILS1P60008 231 aa10.5□□□□□ -0.73
USF1-202ENST00000368020 FOXI2Q6ZQN5 318 aa10.5□□□□□ -0.73
USF1-202ENST00000368020 WFDC3Q8IUB2 231 aa10.5□□□□□ -0.73
USF1-202ENST00000368020 JMJD8Q96S16 334 aa10.5□□□□□ -0.73
USF1-202ENST00000368020 hDV102S1A0JD36 115 aa10.49□□□□□ -0.73
USF1-202ENST00000368020 LINC01619G3V211 115 aa10.49□□□□□ -0.73
USF1-202ENST00000368020 ZNF688P0C7X2 276 aa10.49□□□□□ -0.73
USF1-202ENST00000368020 DNAJC9-AS1A6NH13 148 aa10.48□□□□□ -0.73
USF1-202ENST00000368020 LINC01549A6NIU2 74 aa10.48□□□□□ -0.73
USF1-202ENST00000368020 SMIM17P0DL12 118 aa10.48□□□□□ -0.73
USF1-202ENST00000368020 RNASE3P12724 160 aaKnown RBP10.48□□□□□ -0.73
USF1-202ENST00000368020 G0S2P27469 103 aa10.48□□□□□ -0.73
USF1-202ENST00000368020 BATFQ16520 125 aa10.48□□□□□ -0.73
USF1-202ENST00000368020 ORMDL2Q53FV1 153 aa10.48□□□□□ -0.73
USF1-202ENST00000368020 TCAPO15273 167 aa10.47□□□□□ -0.73
USF1-202ENST00000368020 COX8AP10176 69 aa10.47□□□□□ -0.73
USF1-202ENST00000368020 CDKN1BP46527 198 aa10.47□□□□□ -0.73
USF1-202ENST00000368020 Q6ZQT7 251 aa10.47□□□□□ -0.73
USF1-202ENST00000368020 POM121L12Q8N7R1 296 aa10.47□□□□□ -0.73
USF1-202ENST00000368020 SMIM2Q9BVW6 85 aa10.47□□□□□ -0.73
USF1-202ENST00000368020 EDN2P20800 178 aa10.47□□□□□ -0.73
USF1-202ENST00000368020 DEFB1P60022 68 aa10.47□□□□□ -0.73
USF1-202ENST00000368020 SUMO2P61956 95 aaKnown RBP10.47□□□□□ -0.73
USF1-202ENST00000368020 TCTEX1D4Q5JR98 221 aa10.47□□□□□ -0.73
USF1-202ENST00000368020 C12orf54Q6X4T0 127 aa10.47□□□□□ -0.73
USF1-202ENST00000368020 SYT8Q8NBV8 401 aa10.47□□□□□ -0.73
USF1-202ENST00000368020 ESM1Q9NQ30 184 aa10.47□□□□□ -0.73
USF1-202ENST00000368020 JMJD1CQ15652 2540 aa10.47□□□□□ -0.73
USF1-202ENST00000368020 NF1P21359 2839 aa10.46□□□□□ -0.73
USF1-202ENST00000368020 RNASE1P07998 156 aaKnown RBP10.46□□□□□ -0.74
USF1-202ENST00000368020 GATA1P15976 413 aaPredicted RBP10.46□□□□□ -0.74
USF1-202ENST00000368020 TFPI2P48307 235 aa10.46□□□□□ -0.74
USF1-202ENST00000368020 RPL32P62910 135 aaKnown RBP10.46□□□□□ -0.74
USF1-202ENST00000368020 KIR3DS1Q14943 382 aa10.46□□□□□ -0.74
USF1-202ENST00000368020 TMEM158Q8WZ71 300 aa10.46□□□□□ -0.74
USF1-202ENST00000368020 ANK3Q12955 4377 aaKnown RBP10.45□□□□□ -0.74
USF1-202ENST00000368020 NIPBLQ6KC79 2804 aaeCLIP10.45□□□□□ -0.74
USF1-202ENST00000368020 GNRH2O43555 120 aa10.45□□□□□ -0.74
USF1-202ENST00000368020 GAS8-AS1O95177 125 aa10.45□□□□□ -0.74
USF1-202ENST00000368020 CD7P09564 240 aa10.45□□□□□ -0.74
USF1-202ENST00000368020 ZNF124Q15973 351 aa10.45□□□□□ -0.74
USF1-202ENST00000368020 TRAV26-2A0A0B4J265 109 aa10.44□□□□□ -0.74
USF1-202ENST00000368020 TRAV12-3A0A0B4J271 114 aa10.44□□□□□ -0.74
USF1-202ENST00000368020 C14orf178Q8N769 122 aaPredicted RBP10.44□□□□□ -0.74
USF1-202ENST00000368020 OR9G4Q8NGQ1 327 aa10.44□□□□□ -0.74
USF1-202ENST00000368020 C2CD3Q4AC94 2353 aa10.44□□□□□ -0.74
USF1-202ENST00000368020 PRSS1P07477 247 aa10.44□□□□□ -0.74
USF1-202ENST00000368020 RASL10AQ92737 203 aa10.44□□□□□ -0.74
USF1-202ENST00000368020 DUX5Q96PT3 197 aa10.44□□□□□ -0.74
USF1-202ENST00000368020 MCRIP2Q9BUT9 160 aaKnown RBP10.44□□□□□ -0.74
USF1-202ENST00000368020 ZFHX3Q15911 3703 aa10.43□□□□□ -0.74
USF1-202ENST00000368020 TRGV11A0A075B6L2 103 aa10.43□□□□□ -0.74
USF1-202ENST00000368020 DLEU1O43261 78 aa10.43□□□□□ -0.74
USF1-202ENST00000368020 NUDT3O95989 172 aa10.43□□□□□ -0.74
USF1-202ENST00000368020 MGPP08493 103 aa10.43□□□□□ -0.74
USF1-202ENST00000368020 GAGE1Q13065 139 aa10.43□□□□□ -0.74
USF1-202ENST00000368020 OR11H1Q8NG94 326 aa10.43□□□□□ -0.74
USF1-202ENST00000368020 C9orf85Q96MD7 179 aa10.43□□□□□ -0.74
USF1-202ENST00000368020 ZMAT4Q9H898 229 aa10.43□□□□□ -0.74
USF1-202ENST00000368020 IGHV1OR15-1A0A075B7D0 117 aa10.42□□□□□ -0.74
USF1-202ENST00000368020 A8MTW9 85 aa10.42□□□□□ -0.74
USF1-202ENST00000368020 SIVA1O15304 175 aa10.42□□□□□ -0.74
USF1-202ENST00000368020 FXYD7P58549 80 aa10.42□□□□□ -0.74
USF1-202ENST00000368020 ODF1Q14990 250 aa10.42□□□□□ -0.74
USF1-202ENST00000368020 C18orf15Q96N68 181 aa10.42□□□□□ -0.74
USF1-202ENST00000368020 SETD2Q9BYW2 2564 aaPredicted RBP10.42□□□□□ -0.74
USF1-202ENST00000368020 IGHV3-16A0A0C4DH30 117 aa10.41□□□□□ -0.74
USF1-202ENST00000368020 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms