RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 LTC4SQ16873 150 aa-1.11□□□□□ -2.59
RNU6-553P-201ENST00000364047 IQCJQ1A5X6 159 aa-1.11□□□□□ -2.59
RNU6-553P-201ENST00000364047 CEP19Q96LK0 163 aa-1.11□□□□□ -2.59
RNU6-553P-201ENST00000364047 FKBP11Q9NYL4 201 aa-1.11□□□□□ -2.59
RNU6-553P-201ENST00000364047 SMG1Q96Q15 3661 aaKnown RBP-1.11□□□□□ -2.59
RNU6-553P-201ENST00000364047 WDFY4Q6ZS81 3184 aa-1.11□□□□□ -2.59
RNU6-553P-201ENST00000364047 DCHS1Q96JQ0 3298 aa-1.12□□□□□ -2.59
RNU6-553P-201ENST00000364047 TMEM189A5PLL7 270 aa-1.12□□□□□ -2.59
RNU6-553P-201ENST00000364047 CDC42EP2O14613 210 aa-1.12□□□□□ -2.59
RNU6-553P-201ENST00000364047 MAXP61244 160 aa-1.12□□□□□ -2.59
RNU6-553P-201ENST00000364047 ARF6P62330 175 aa-1.12□□□□□ -2.59
RNU6-553P-201ENST00000364047 RHOHQ15669 191 aa-1.12□□□□□ -2.59
RNU6-553P-201ENST00000364047 DHRS4L2Q6PKH6 230 aa-1.12□□□□□ -2.59
RNU6-553P-201ENST00000364047 OR13C6PQ8NH95 151 aa-1.12□□□□□ -2.59
RNU6-553P-201ENST00000364047 PRELID3AQ96N28 172 aa-1.12□□□□□ -2.59
RNU6-553P-201ENST00000364047 GINS3Q9BRX5 216 aa-1.12□□□□□ -2.59
RNU6-553P-201ENST00000364047 ATG5Q9H1Y0 275 aa-1.12□□□□□ -2.59
RNU6-553P-201ENST00000364047 LRTM1Q9HBL6 345 aa-1.12□□□□□ -2.59
RNU6-553P-201ENST00000364047 CNOT1A5YKK6 2376 aaKnown RBP-1.12□□□□□ -2.59
RNU6-553P-201ENST00000364047 SZT2Q5T011 3432 aa-1.12□□□□□ -2.59
RNU6-553P-201ENST00000364047 DNAH17Q9UFH2 4485 aa-1.13□□□□□ -2.59
RNU6-553P-201ENST00000364047 UTP20O75691 2785 aaKnown RBP-1.13□□□□□ -2.59
RNU6-553P-201ENST00000364047 CCKP06307 115 aa-1.13□□□□□ -2.59
RNU6-553P-201ENST00000364047 NAT14Q8WUY8 206 aa-1.13□□□□□ -2.59
RNU6-553P-201ENST00000364047 LAMTOR3Q9UHA4 124 aa-1.13□□□□□ -2.59
RNU6-553P-201ENST00000364047 BLMP54132 1417 aaPredicted RBP-1.14□□□□□ -2.59
RNU6-553P-201ENST00000364047 TRAPPC8Q9Y2L5 1435 aa-1.14□□□□□ -2.59
RNU6-553P-201ENST00000364047 DMXL1Q9Y485 3027 aa-1.14□□□□□ -2.59
RNU6-553P-201ENST00000364047 KIAA1549LQ6ZVL6 1849 aa-1.14□□□□□ -2.59
RNU6-553P-201ENST00000364047 ATG2AQ2TAZ0 1938 aa-1.14□□□□□ -2.59
RNU6-553P-201ENST00000364047 IFITM5A6NNB3 132 aa-1.14□□□□□ -2.59
RNU6-553P-201ENST00000364047 C9JAW5 83 aa-1.14□□□□□ -2.59
RNU6-553P-201ENST00000364047 MFSD11O43934 449 aa-1.14□□□□□ -2.59
RNU6-553P-201ENST00000364047 EDF1O60869 148 aaKnown RBP-1.14□□□□□ -2.59
RNU6-553P-201ENST00000364047 IFNA1P01562 189 aa-1.14□□□□□ -2.59
RNU6-553P-201ENST00000364047 MT1HL1P0DM35 61 aa-1.14□□□□□ -2.59
RNU6-553P-201ENST00000364047 HSD11B1P28845 292 aa-1.14□□□□□ -2.59
RNU6-553P-201ENST00000364047 GTF2A1P52655 376 aaPredicted RBP-1.14□□□□□ -2.59
RNU6-553P-201ENST00000364047 ESPL1Q14674 2120 aa-1.14□□□□□ -2.59
RNU6-553P-201ENST00000364047 TMED2Q15363 201 aa-1.14□□□□□ -2.59
RNU6-553P-201ENST00000364047 LOC400499M0QZD8 3231 aa-1.14□□□□□ -2.59
RNU6-553P-201ENST00000364047 LRBAP50851 2863 aa-1.15□□□□□ -2.59
RNU6-553P-201ENST00000364047 ZCCHC6Q5VYS8 1495 aaKnown RBP-1.15□□□□□ -2.59
RNU6-553P-201ENST00000364047 CDK12Q9NYV4 1490 aaPredicted RBP-1.15□□□□□ -2.59
RNU6-553P-201ENST00000364047 LOC107986453A0A1B0GWG9 222 aa-1.15□□□□□ -2.59
RNU6-553P-201ENST00000364047 GLRXP35754 106 aa-1.15□□□□□ -2.59
RNU6-553P-201ENST00000364047 MRPS25P82663 173 aaKnown RBP-1.15□□□□□ -2.59
RNU6-553P-201ENST00000364047 FADDQ13158 208 aa-1.15□□□□□ -2.59
RNU6-553P-201ENST00000364047 BOD1L1Q8NFC6 3051 aa-1.15□□□□□ -2.59
RNU6-553P-201ENST00000364047 DNAH8Q96JB1 4490 aa-1.15□□□□□ -2.59
RNU6-553P-201ENST00000364047 TRPM7Q96QT4 1865 aa-1.16□□□□□ -2.59
RNU6-553P-201ENST00000364047 AFDNP55196 1824 aaKnown RBP-1.16□□□□□ -2.6
RNU6-553P-201ENST00000364047 NMBP08949 121 aa-1.16□□□□□ -2.6
RNU6-553P-201ENST00000364047 MED11Q9P086 117 aa-1.16□□□□□ -2.6
RNU6-553P-201ENST00000364047 NUBP2Q9Y5Y2 271 aa-1.16□□□□□ -2.6
RNU6-553P-201ENST00000364047 SPEGQ15772 3267 aa-1.16□□□□□ -2.6
RNU6-553P-201ENST00000364047 DNAH9Q9NYC9 4486 aa-1.17□□□□□ -2.6
RNU6-553P-201ENST00000364047 DCHS2Q6V1P9 2916 aa-1.17□□□□□ -2.6
RNU6-553P-201ENST00000364047 CAMSAP1Q5T5Y3 1602 aa-1.17□□□□□ -2.6
RNU6-553P-201ENST00000364047 DNAH11Q96DT5 4516 aa-1.17□□□□□ -2.6
RNU6-553P-201ENST00000364047 ANK1P16157 1881 aa-1.17□□□□□ -2.6
RNU6-553P-201ENST00000364047 CFDP00746 253 aaPredicted RBP-1.17□□□□□ -2.6
RNU6-553P-201ENST00000364047 SMIM7Q9BQ49 75 aa-1.17□□□□□ -2.6
RNU6-553P-201ENST00000364047 BPESC1Q9GZL8 116 aa-1.17□□□□□ -2.6
RNU6-553P-201ENST00000364047 COA4Q9NYJ1 87 aa-1.17□□□□□ -2.6
RNU6-553P-201ENST00000364047 USP54Q70EL1 1684 aa-1.17□□□□□ -2.6
RNU6-553P-201ENST00000364047 TRANK1O15050 2925 aa-1.17□□□□□ -2.6
RNU6-553P-201ENST00000364047 LAMC3Q9Y6N6 1575 aa-1.17□□□□□ -2.6
RNU6-553P-201ENST00000364047 ZZEF1O43149 2961 aa-1.17□□□□□ -2.6
RNU6-553P-201ENST00000364047 MUC3AQ02505 3323 aa-1.18□□□□□ -2.6
RNU6-553P-201ENST00000364047 DLC1Q96QB1 1528 aa-1.18□□□□□ -2.6
RNU6-553P-201ENST00000364047 H7BYZ3 331 aa-1.18□□□□□ -2.6
RNU6-553P-201ENST00000364047 SDC2P34741 201 aa-1.18□□□□□ -2.6
RNU6-553P-201ENST00000364047 RPL19P84098 196 aaKnown RBP-1.18□□□□□ -2.6
RNU6-553P-201ENST00000364047 OR5A2Q8NGI9 324 aa-1.18□□□□□ -2.6
RNU6-553P-201ENST00000364047 AP3S1Q92572 193 aa-1.18□□□□□ -2.6
RNU6-553P-201ENST00000364047 ABCA1O95477 2261 aa-1.19□□□□□ -2.6
RNU6-553P-201ENST00000364047 TRDV1A0A1B0GX56 115 aa-1.19□□□□□ -2.6
RNU6-553P-201ENST00000364047 GABARAPH6UMI1 98 aa-1.19□□□□□ -2.6
RNU6-553P-201ENST00000364047 SDC4P31431 198 aa-1.19□□□□□ -2.6
RNU6-553P-201ENST00000364047 TMEM141Q96I45 108 aa-1.19□□□□□ -2.6
RNU6-553P-201ENST00000364047 RREB1Q92766 1687 aa-1.2□□□□□ -2.6
RNU6-553P-201ENST00000364047 AKAP9Q99996 3911 aa-1.2□□□□□ -2.6
RNU6-553P-201ENST00000364047 TRAV16A0A0A6YYK6 109 aaPredicted RBP-1.2□□□□□ -2.6
RNU6-553P-201ENST00000364047 TRBV27A0A0K0K1C4 114 aa-1.2□□□□□ -2.6
RNU6-553P-201ENST00000364047 SLC25A4P12235 298 aa-1.2□□□□□ -2.6
RNU6-553P-201ENST00000364047 GNG3P63215 75 aa-1.2□□□□□ -2.6
RNU6-553P-201ENST00000364047 UNQ5815/PRO19632Q6UWF5 114 aa-1.2□□□□□ -2.6
RNU6-553P-201ENST00000364047 PPP1R1CQ8WVI7 109 aa-1.2□□□□□ -2.6
RNU6-553P-201ENST00000364047 ADGRG4Q8IZF6 3080 aa-1.2□□□□□ -2.6
RNU6-553P-201ENST00000364047 CDK13Q14004 1512 aaKnown RBP-1.2□□□□□ -2.6
RNU6-553P-201ENST00000364047 TECPR2O15040 1411 aa-1.21□□□□□ -2.6
RNU6-553P-201ENST00000364047 MT1AP04731 61 aa-1.21□□□□□ -2.6
RNU6-553P-201ENST00000364047 PYYP10082 97 aa-1.21□□□□□ -2.6
RNU6-553P-201ENST00000364047 BLCAPP62952 87 aa-1.21□□□□□ -2.6
RNU6-553P-201ENST00000364047 EMX2Q04743 252 aa-1.21□□□□□ -2.6
RNU6-553P-201ENST00000364047 KRTAP8-1Q8IUC2 63 aa-1.21□□□□□ -2.6
RNU6-553P-201ENST00000364047 SMIM20Q8N5G0 67 aa-1.21□□□□□ -2.6
RNU6-553P-201ENST00000364047 LINC00846Q9NV44 126 aa-1.21□□□□□ -2.6
RNU6-553P-201ENST00000364047 DMDP11532 3685 aa-1.21□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms