RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 LINC00305Q7Z4B0 112 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 SBSPONQ8IVN8 264 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 AMN1Q8IY45 258 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 OR4C13Q8NGP0 309 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 OR13A1Q8NGR1 328 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 FLYWCH2Q96CP2 140 aaKnown RBP3.1□□□□□ -1.91
CNGA1-201ENST00000358519 DNAJC30Q96LL9 226 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 PRRC2AP48634 2157 aaKnown RBP3.1□□□□□ -1.91
CNGA1-201ENST00000358519 FREM1Q5H8C1 2179 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 TNCP24821 2201 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 TACC2O95359 2948 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.1□□□□□ -1.91
CNGA1-201ENST00000358519 ZNF785A8K8V0 405 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 SMKR1H3BMG3 65 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 H3BTX0 84 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 LY6G6DO95868 133 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 TCL1BO95988 128 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 TFF1P04155 84 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 HOXA4Q00056 320 aaPredicted RBP3.1□□□□□ -1.91
CNGA1-201ENST00000358519 CD69Q07108 199 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 FAM27E3Q08E93 113 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 TWIST1Q15672 202 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 MRPL51Q4U2R6 128 aaKnown RBP3.1□□□□□ -1.91
CNGA1-201ENST00000358519 FAM104BQ5XKR9 115 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 NPBQ8NG41 125 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 OR1L4Q8NGR5 311 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 OR10J6PQ8NGY7 276 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 SMR3AQ99954 134 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 IFI27L2Q9H2X8 130 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 C19orf73Q9NVV2 129 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 ZGRF1Q86YA3 2104 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 ACANP16112 2415 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 INTS1Q8N201 2190 aaKnown RBP3.1□□□□□ -1.91
CNGA1-201ENST00000358519 TMEM213A2RRL7 107 aa3.09□□□□□ -1.91
CNGA1-201ENST00000358519 NCBP2LA6PVI3 153 aaKnown RBP3.09□□□□□ -1.91
CNGA1-201ENST00000358519 TGFAP01135 160 aa3.09□□□□□ -1.91
CNGA1-201ENST00000358519 NPYP01303 97 aa3.09□□□□□ -1.91
CNGA1-201ENST00000358519 SCGB1C2P0DMR2 95 aa3.09□□□□□ -1.91
CNGA1-201ENST00000358519 RPL7P18124 248 aaKnown RBP3.09□□□□□ -1.91
CNGA1-201ENST00000358519 CKS2P33552 79 aa3.09□□□□□ -1.91
CNGA1-201ENST00000358519 LEPP41159 167 aa3.09□□□□□ -1.91
CNGA1-201ENST00000358519 ZNF134P52741 427 aa3.09□□□□□ -1.91
CNGA1-201ENST00000358519 PRCDQ00LT1 54 aa3.09□□□□□ -1.91
CNGA1-201ENST00000358519 SPRNQ5BIV9 151 aa3.09□□□□□ -1.91
CNGA1-201ENST00000358519 PRNTQ86SH4 94 aa3.09□□□□□ -1.91
CNGA1-201ENST00000358519 Q86TA4 180 aa3.09□□□□□ -1.91
CNGA1-201ENST00000358519 LINC01587Q99440 93 aa3.09□□□□□ -1.91
CNGA1-201ENST00000358519 TRGV9Q99603 122 aa3.09□□□□□ -1.91
CNGA1-201ENST00000358519 CHCHD5Q9BSY4 110 aa3.09□□□□□ -1.91
CNGA1-201ENST00000358519 C21orf62Q9NYP8 219 aa3.09□□□□□ -1.91
CNGA1-201ENST00000358519 A0A1W2PPI3 338 aa3.09□□□□□ -1.91
CNGA1-201ENST00000358519 ODF3BA8MYP8 253 aa3.09□□□□□ -1.91
CNGA1-201ENST00000358519 UPK2O00526 184 aa3.09□□□□□ -1.91
CNGA1-201ENST00000358519 WNT9BO14905 357 aa3.09□□□□□ -1.91
CNGA1-201ENST00000358519 IGLV2-11P01706 119 aa3.09□□□□□ -1.91
CNGA1-201ENST00000358519 IGHV3-48P01763 117 aa3.09□□□□□ -1.91
CNGA1-201ENST00000358519 ORM2P19652 201 aa3.09□□□□□ -1.91
CNGA1-201ENST00000358519 C9orf139Q6ZV77 190 aa3.09□□□□□ -1.91
CNGA1-201ENST00000358519 C15orf53Q8NAA6 179 aa3.09□□□□□ -1.91
CNGA1-201ENST00000358519 ASCL2Q99929 193 aa3.09□□□□□ -1.91
CNGA1-201ENST00000358519 PIMREGQ9BSJ6 248 aa3.09□□□□□ -1.91
CNGA1-201ENST00000358519 Q9H3A6 140 aa3.09□□□□□ -1.91
CNGA1-201ENST00000358519 UBTD1Q9HAC8 227 aa3.09□□□□□ -1.91
CNGA1-201ENST00000358519 MRPL35Q9NZE8 188 aaKnown RBP3.09□□□□□ -1.91
CNGA1-201ENST00000358519 GNG12Q9UBI6 72 aa3.09□□□□□ -1.91
CNGA1-201ENST00000358519 FBN1P35555 2871 aaKnown RBP3.09□□□□□ -1.92
CNGA1-201ENST00000358519 LINC01619G3V211 115 aa3.08□□□□□ -1.92
CNGA1-201ENST00000358519 LY6LH3BQJ8 138 aa3.08□□□□□ -1.92
CNGA1-201ENST00000358519 ATP5LO75964 103 aa3.08□□□□□ -1.92
CNGA1-201ENST00000358519 NDUFA3O95167 84 aa3.08□□□□□ -1.92
CNGA1-201ENST00000358519 FSHBP01225 129 aa3.08□□□□□ -1.92
CNGA1-201ENST00000358519 IGHV1-8P0DP01 117 aa3.08□□□□□ -1.92
CNGA1-201ENST00000358519 RNASE2P10153 161 aaKnown RBP3.08□□□□□ -1.92
CNGA1-201ENST00000358519 UBE2D1P51668 147 aa3.08□□□□□ -1.92
CNGA1-201ENST00000358519 ERHP84090 104 aaKnown RBP3.08□□□□□ -1.92
CNGA1-201ENST00000358519 DEFB113Q30KQ7 82 aa3.08□□□□□ -1.92
CNGA1-201ENST00000358519 LYRM7Q5U5X0 104 aa3.08□□□□□ -1.92
CNGA1-201ENST00000358519 LYZL1Q6UWQ5 148 aa3.08□□□□□ -1.92
CNGA1-201ENST00000358519 GOLT1AQ6ZVE7 132 aa3.08□□□□□ -1.92
CNGA1-201ENST00000358519 FAM19A5Q7Z5A7 132 aaPredicted RBP3.08□□□□□ -1.92
CNGA1-201ENST00000358519 TMEM86BQ8N661 226 aa3.08□□□□□ -1.92
CNGA1-201ENST00000358519 ODF3Q96PU9 254 aa3.08□□□□□ -1.92
CNGA1-201ENST00000358519 AAMDCQ9H7C9 122 aa3.08□□□□□ -1.92
CNGA1-201ENST00000358519 NSD1Q96L73 2696 aaPredicted RBP3.08□□□□□ -1.92
CNGA1-201ENST00000358519 TRBV6-1A0A0K0K1D8 114 aa3.08□□□□□ -1.92
CNGA1-201ENST00000358519 SPRY3O43610 288 aa3.08□□□□□ -1.92
CNGA1-201ENST00000358519 SLC25A20O43772 301 aa3.08□□□□□ -1.92
CNGA1-201ENST00000358519 IGLV1-47P01700 117 aa3.08□□□□□ -1.92
CNGA1-201ENST00000358519 CRIP1P50238 77 aa3.08□□□□□ -1.92
CNGA1-201ENST00000358519 UBE2E1P51965 193 aa3.08□□□□□ -1.92
CNGA1-201ENST00000358519 MRPL23Q16540 153 aaKnown RBP3.08□□□□□ -1.92
CNGA1-201ENST00000358519 ZNF826PQ6ZT77 177 aa3.08□□□□□ -1.92
CNGA1-201ENST00000358519 WFDC11Q8NEX6 87 aa3.08□□□□□ -1.92
CNGA1-201ENST00000358519 NPIPB3Q92617 1050 aa3.08□□□□□ -1.92
CNGA1-201ENST00000358519 SIGLEC9Q9Y336 463 aa3.08□□□□□ -1.92
CNGA1-201ENST00000358519 IGKV1D-37A0A075B6S9 117 aa3.07□□□□□ -1.92
CNGA1-201ENST00000358519 LINC01546A6NGU7 62 aa3.07□□□□□ -1.92
CNGA1-201ENST00000358519 C9JAW5 83 aa3.07□□□□□ -1.92
CNGA1-201ENST00000358519 INAFM1C9JVW0 142 aa3.07□□□□□ -1.92
CNGA1-201ENST00000358519 DUSP14O95147 198 aaKnown RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms