RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 MXRA5Q9NR99 2828 aa15.47■□□□□ 0.07
COL13A1-202ENST00000357811 IGHV4-30-2A0A087WSY4 118 aa15.47■□□□□ 0.07
COL13A1-202ENST00000357811 FAM223BA6NKX1 122 aa15.47■□□□□ 0.07
COL13A1-202ENST00000357811 SRSF1Q07955 248 aaKnown RBP eCLIP15.47■□□□□ 0.07
COL13A1-202ENST00000357811 FAM223AQ8IWN6 122 aa15.47■□□□□ 0.07
COL13A1-202ENST00000357811 NPFFR1Q9GZQ6 430 aa15.47■□□□□ 0.07
COL13A1-202ENST00000357811 MUC4Q99102 2169 aa15.47■□□□□ 0.07
COL13A1-202ENST00000357811 ANKRD17O75179 2603 aaKnown RBP15.46■□□□□ 0.07
COL13A1-202ENST00000357811 SETD2Q9BYW2 2564 aaPredicted RBP15.46■□□□□ 0.07
COL13A1-202ENST00000357811 C10orf99Q6UWK7 81 aa15.46■□□□□ 0.07
COL13A1-202ENST00000357811 RASL10AQ92737 203 aa15.46■□□□□ 0.07
COL13A1-202ENST00000357811 SMIM2Q9BVW6 85 aa15.46■□□□□ 0.07
COL13A1-202ENST00000357811 TEX48A0A1B0GUV7 120 aa15.46■□□□□ 0.07
COL13A1-202ENST00000357811 ATP5LO75964 103 aa15.46■□□□□ 0.07
COL13A1-202ENST00000357811 EMP1P54849 157 aa15.46■□□□□ 0.07
COL13A1-202ENST00000357811 ATP5J2P56134 94 aa15.46■□□□□ 0.07
COL13A1-202ENST00000357811 CCL19Q99731 98 aa15.46■□□□□ 0.07
COL13A1-202ENST00000357811 SVIPQ8NHG7 77 aa15.45■□□□□ 0.06
COL13A1-202ENST00000357811 LINC01546A6NGU7 62 aa15.45■□□□□ 0.06
COL13A1-202ENST00000357811 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.45■□□□□ 0.06
COL13A1-202ENST00000357811 ASIPP42127 132 aa15.45■□□□□ 0.06
COL13A1-202ENST00000357811 C19orf54Q5BKX5 351 aa15.45■□□□□ 0.06
COL13A1-202ENST00000357811 MRPL53Q96EL3 112 aaKnown RBP15.45■□□□□ 0.06
COL13A1-202ENST00000357811 SCGB3A1Q96QR1 104 aa15.45■□□□□ 0.06
COL13A1-202ENST00000357811 TRAV21A0A0B4J279 112 aa15.45■□□□□ 0.06
COL13A1-202ENST00000357811 SIVA1O15304 175 aa15.45■□□□□ 0.06
COL13A1-202ENST00000357811 AVPP01185 164 aa15.44■□□□□ 0.06
COL13A1-202ENST00000357811 SMIM13P0DJ93 91 aa15.44■□□□□ 0.06
COL13A1-202ENST00000357811 SUMO2P61956 95 aaKnown RBP15.44■□□□□ 0.06
COL13A1-202ENST00000357811 PIMREGQ9BSJ6 248 aa15.44■□□□□ 0.06
COL13A1-202ENST00000357811 A0A1W2PPM0 123 aa15.44■□□□□ 0.06
COL13A1-202ENST00000357811 MAPK1IP1LQ8NDC0 245 aa15.44■□□□□ 0.06
COL13A1-202ENST00000357811 NDUFA4O00483 81 aa15.43■□□□□ 0.06
COL13A1-202ENST00000357811 KLK9Q2XQG4 91 aa15.43■□□□□ 0.06
COL13A1-202ENST00000357811 SAMD5Q5TGI4 173 aa15.43■□□□□ 0.06
COL13A1-202ENST00000357811 LINC00477Q96M19 166 aa15.43■□□□□ 0.06
COL13A1-202ENST00000357811 KLK9Q9UKQ9 250 aa15.43■□□□□ 0.06
COL13A1-202ENST00000357811 A0A087WWL8 130 aa15.42■□□□□ 0.06
COL13A1-202ENST00000357811 SOCS3O14543 225 aa15.42■□□□□ 0.06
COL13A1-202ENST00000357811 SIGMAR1Q99720 223 aa15.42■□□□□ 0.06
COL13A1-202ENST00000357811 A0A087WX48 190 aa15.42■□□□□ 0.06
COL13A1-202ENST00000357811 FABP2P12104 132 aa15.42■□□□□ 0.06
COL13A1-202ENST00000357811 SONP18583 2426 aaKnown RBP15.41■□□□□ 0.06
COL13A1-202ENST00000357811 MTURNQ8N3F0 131 aa15.41■□□□□ 0.06
COL13A1-202ENST00000357811 TRAV12-3A0A0B4J271 114 aa15.4■□□□□ 0.06
COL13A1-202ENST00000357811 RNASE3P12724 160 aaKnown RBP15.4■□□□□ 0.06
COL13A1-202ENST00000357811 DPH3P1Q9H4G8 78 aa15.4■□□□□ 0.06
COL13A1-202ENST00000357811 OVOL1O14753 267 aa15.4■□□□□ 0.06
COL13A1-202ENST00000357811 IGHV4-4A0A075B6R2 117 aa15.39■□□□□ 0.05
COL13A1-202ENST00000357811 TRAV12-2A0A075B6T6 113 aa15.39■□□□□ 0.05
COL13A1-202ENST00000357811 F5H697 171 aa15.39■□□□□ 0.05
COL13A1-202ENST00000357811 IGHG2P01859 326 aa15.39■□□□□ 0.05
COL13A1-202ENST00000357811 FAM74A4Q5TZK3 123 aa15.39■□□□□ 0.05
COL13A1-202ENST00000357811 HIST1H4GQ99525 98 aa15.39■□□□□ 0.05
COL13A1-202ENST00000357811 C2orf66Q6UXQ4 117 aa15.39■□□□□ 0.05
COL13A1-202ENST00000357811 OR5A1Q8NGJ0 315 aa15.39■□□□□ 0.05
COL13A1-202ENST00000357811 C10orf105Q8TEF2 133 aa15.39■□□□□ 0.05
COL13A1-202ENST00000357811 MRAP2Q96G30 205 aa15.39■□□□□ 0.05
COL13A1-202ENST00000357811 TSSC4Q9Y5U2 329 aaPredicted RBP15.39■□□□□ 0.05
COL13A1-202ENST00000357811 ZNF462Q96JM2 2506 aa15.39■□□□□ 0.05
COL13A1-202ENST00000357811 ZNF688P0C7X2 276 aa15.39■□□□□ 0.05
COL13A1-202ENST00000357811 DUX5Q96PT3 197 aa15.39■□□□□ 0.05
COL13A1-202ENST00000357811 A0A1B0GV72 72 aa15.38■□□□□ 0.05
COL13A1-202ENST00000357811 CEND1Q8N111 149 aa15.38■□□□□ 0.05
COL13A1-202ENST00000357811 SMPXQ9UHP9 88 aa15.38■□□□□ 0.05
COL13A1-202ENST00000357811 NAV2Q8IVL1 2488 aa15.37■□□□□ 0.05
COL13A1-202ENST00000357811 A6NDX4 124 aa15.37■□□□□ 0.05
COL13A1-202ENST00000357811 DAZ1Q9NQZ3 744 aaKnown RBP15.37■□□□□ 0.05
COL13A1-202ENST00000357811 CYSLTR1Q9Y271 337 aa15.37■□□□□ 0.05
COL13A1-202ENST00000357811 F8VRH5 84 aa15.36■□□□□ 0.05
COL13A1-202ENST00000357811 CD7P09564 240 aa15.36■□□□□ 0.05
COL13A1-202ENST00000357811 SFTA2Q6UW10 78 aa15.36■□□□□ 0.05
COL13A1-202ENST00000357811 FBN2P35556 2912 aa15.36■□□□□ 0.05
COL13A1-202ENST00000357811 TEX15Q9BXT5 2789 aa15.36■□□□□ 0.05
COL13A1-202ENST00000357811 H7C1H1 209 aa15.36■□□□□ 0.05
COL13A1-202ENST00000357811 DUSP14O95147 198 aaKnown RBP15.36■□□□□ 0.05
COL13A1-202ENST00000357811 AMTNQ6UX39 209 aa15.36■□□□□ 0.05
COL13A1-202ENST00000357811 RNF223E7ERA6 249 aa15.35■□□□□ 0.05
COL13A1-202ENST00000357811 IGHV4-59P01825 116 aa15.35■□□□□ 0.05
COL13A1-202ENST00000357811 MSMBP08118 114 aa15.35■□□□□ 0.05
COL13A1-202ENST00000357811 USMG5Q96IX5 58 aa15.35■□□□□ 0.05
COL13A1-202ENST00000357811 RPL39P62891 51 aaKnown RBP15.35■□□□□ 0.05
COL13A1-202ENST00000357811 FAM159AQ6UWV7 190 aa15.35■□□□□ 0.05
COL13A1-202ENST00000357811 ATP6V0BQ99437 205 aa15.35■□□□□ 0.05
COL13A1-202ENST00000357811 LENEPQ9Y5L5 61 aa15.35■□□□□ 0.05
COL13A1-202ENST00000357811 PRSS29PA6NIE9 313 aa15.34■□□□□ 0.05
COL13A1-202ENST00000357811 OR11H12B2RN74 326 aa15.34■□□□□ 0.05
COL13A1-202ENST00000357811 PLNP26678 52 aa15.34■□□□□ 0.05
COL13A1-202ENST00000357811 CD300EQ496F6 205 aaPredicted RBP15.34■□□□□ 0.05
COL13A1-202ENST00000357811 ORMDL2Q53FV1 153 aa15.34■□□□□ 0.05
COL13A1-202ENST00000357811 PSMG4Q5JS54 123 aa15.34■□□□□ 0.05
COL13A1-202ENST00000357811 OR11H1Q8NG94 326 aa15.34■□□□□ 0.05
COL13A1-202ENST00000357811 OR11H2Q8NH07 326 aa15.34■□□□□ 0.05
COL13A1-202ENST00000357811 BAALCQ8WXS3 180 aa15.34■□□□□ 0.05
COL13A1-202ENST00000357811 HIGD1BQ9P298 99 aa15.34■□□□□ 0.05
COL13A1-202ENST00000357811 WNK1Q9H4A3 2382 aa15.34■□□□□ 0.05
COL13A1-202ENST00000357811 GAGE12HA6NDE8 117 aa15.34■□□□□ 0.05
COL13A1-202ENST00000357811 KLHL30-AS1Q8NEE0 82 aa15.34■□□□□ 0.05
COL13A1-202ENST00000357811 EPG5Q9HCE0 2579 aa15.34■□□□□ 0.05
COL13A1-202ENST00000357811 SCGB2A2Q13296 93 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms