RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 TPSG1Q9NRR2 321 aa12.04□□□□□ -0.48
RTN3-205ENST00000356000 C11orf86A6NJI1 115 aa12.03□□□□□ -0.48
RTN3-205ENST00000356000 OXTP01178 125 aa12.03□□□□□ -0.48
RTN3-205ENST00000356000 PAPPA-AS1Q5QFB9 102 aa12.03□□□□□ -0.48
RTN3-205ENST00000356000 C14orf178Q8N769 122 aaPredicted RBP12.03□□□□□ -0.48
RTN3-205ENST00000356000 Q8TAT8 98 aa12.03□□□□□ -0.48
RTN3-205ENST00000356000 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.03□□□□□ -0.48
RTN3-205ENST00000356000 IGKV1-17P01599 117 aa12.03□□□□□ -0.48
RTN3-205ENST00000356000 TRACP01848 142 aa12.03□□□□□ -0.48
RTN3-205ENST00000356000 TMEM258P61165 79 aa12.03□□□□□ -0.48
RTN3-205ENST00000356000 LINC00643Q86TS7 51 aa12.03□□□□□ -0.48
RTN3-205ENST00000356000 BEX4Q9NWD9 120 aaPredicted RBP12.02□□□□□ -0.49
RTN3-205ENST00000356000 CEP295Q9C0D2 2601 aa12.02□□□□□ -0.49
RTN3-205ENST00000356000 IGLV4-69A0A075B6H9 119 aa12.02□□□□□ -0.49
RTN3-205ENST00000356000 hADV29S1A0JD25 119 aa12.02□□□□□ -0.49
RTN3-205ENST00000356000 VMA21Q3ZAQ7 101 aa12.02□□□□□ -0.49
RTN3-205ENST00000356000 C2orf66Q6UXQ4 117 aa12.02□□□□□ -0.49
RTN3-205ENST00000356000 BAHCC1Q9P281 2608 aa12.02□□□□□ -0.49
RTN3-205ENST00000356000 CXCL5P42830 114 aa12.01□□□□□ -0.49
RTN3-205ENST00000356000 C5orf38Q86SI9 138 aa12.01□□□□□ -0.49
RTN3-205ENST00000356000 NBEAQ8NFP9 2946 aa12.01□□□□□ -0.49
RTN3-205ENST00000356000 PLXNB1O43157 2135 aa12.01□□□□□ -0.49
RTN3-205ENST00000356000 WDFY3Q8IZQ1 3526 aa12.01□□□□□ -0.49
RTN3-205ENST00000356000 IGF2RP11717 2491 aa12.01□□□□□ -0.49
RTN3-205ENST00000356000 DSCAMO60469 2012 aa12□□□□□ -0.49
RTN3-205ENST00000356000 IGHV5-10-1A0A0J9YXX1 117 aa12□□□□□ -0.49
RTN3-205ENST00000356000 DUX4L9Q6RFH8 374 aaPredicted RBP12□□□□□ -0.49
RTN3-205ENST00000356000 SMCR5Q8TEV8 140 aa12□□□□□ -0.49
RTN3-205ENST00000356000 CYSTM1Q9H1C7 97 aa12□□□□□ -0.49
RTN3-205ENST00000356000 FRYLO94915 3013 aa11.99□□□□□ -0.49
RTN3-205ENST00000356000 TMEM223A0PJW6 202 aa11.99□□□□□ -0.49
RTN3-205ENST00000356000 MBD3L4A6NDZ8 208 aaPredicted RBP11.99□□□□□ -0.49
RTN3-205ENST00000356000 MBD3L3A6NE82 208 aaPredicted RBP11.99□□□□□ -0.49
RTN3-205ENST00000356000 MBD3L5A6NJ08 208 aaPredicted RBP11.99□□□□□ -0.49
RTN3-205ENST00000356000 RPL27AP46776 148 aaKnown RBP11.99□□□□□ -0.49
RTN3-205ENST00000356000 MUSTN1Q8IVN3 82 aa11.99□□□□□ -0.49
RTN3-205ENST00000356000 ZNF491Q8N8L2 437 aa11.99□□□□□ -0.49
RTN3-205ENST00000356000 PRR14LQ5THK1 2151 aa11.99□□□□□ -0.49
RTN3-205ENST00000356000 LHBP01229 141 aa11.99□□□□□ -0.49
RTN3-205ENST00000356000 APELAP0DMC3 54 aa11.99□□□□□ -0.49
RTN3-205ENST00000356000 LAMA1P25391 3075 aa11.98□□□□□ -0.49
RTN3-205ENST00000356000 I3L2K1 104 aa11.98□□□□□ -0.49
RTN3-205ENST00000356000 PRB1P04280 392 aa11.98□□□□□ -0.49
RTN3-205ENST00000356000 HIST1H4AP62805 103 aaKnown RBP11.98□□□□□ -0.49
RTN3-205ENST00000356000 Q0VFX4 171 aa11.98□□□□□ -0.49
RTN3-205ENST00000356000 SDIM1Q6ZPB5 146 aa11.98□□□□□ -0.49
RTN3-205ENST00000356000 FRYQ5TBA9 3013 aa11.98□□□□□ -0.49
RTN3-205ENST00000356000 J3QQQ9 107 aa11.98□□□□□ -0.49
RTN3-205ENST00000356000 RNF125Q96EQ8 232 aa11.98□□□□□ -0.49
RTN3-205ENST00000356000 ATOX1O00244 68 aa11.97□□□□□ -0.49
RTN3-205ENST00000356000 DLX6P56179 175 aa11.97□□□□□ -0.49
RTN3-205ENST00000356000 SUMO2P61956 95 aaKnown RBP11.97□□□□□ -0.49
RTN3-205ENST00000356000 TRAV41A0A0B4J266 112 aa11.97□□□□□ -0.49
RTN3-205ENST00000356000 A0A1W2PNU3 283 aaPredicted RBP11.97□□□□□ -0.49
RTN3-205ENST00000356000 FAM201AQ5SY85 155 aa11.97□□□□□ -0.49
RTN3-205ENST00000356000 CFHR4Q92496 578 aa11.97□□□□□ -0.49
RTN3-205ENST00000356000 IGHV4-4A0A075B6R2 117 aa11.96□□□□□ -0.49
RTN3-205ENST00000356000 IGHV1-2P23083 117 aa11.96□□□□□ -0.49
RTN3-205ENST00000356000 URB1O60287 2271 aaKnown RBP11.96□□□□□ -0.49
RTN3-205ENST00000356000 IGKV3D-20A0A0C4DH25 116 aa11.96□□□□□ -0.5
RTN3-205ENST00000356000 LGALS3P17931 250 aaKnown RBP11.96□□□□□ -0.5
RTN3-205ENST00000356000 SPINK14Q6IE38 97 aa11.96□□□□□ -0.5
RTN3-205ENST00000356000 FAM216BQ8N7L0 139 aa11.96□□□□□ -0.5
RTN3-205ENST00000356000 SLC50A1Q9BRV3 221 aa11.96□□□□□ -0.5
RTN3-205ENST00000356000 ICOSQ9Y6W8 199 aa11.96□□□□□ -0.5
RTN3-205ENST00000356000 CNTFRP26992 372 aa11.95□□□□□ -0.5
RTN3-205ENST00000356000 LST1O00453 97 aa11.95□□□□□ -0.5
RTN3-205ENST00000356000 LYZL6O75951 148 aa11.95□□□□□ -0.5
RTN3-205ENST00000356000 JPT2Q9H910 190 aa11.95□□□□□ -0.5
RTN3-205ENST00000356000 IGHV7-4-1A0A0J9YVY3 117 aa11.94□□□□□ -0.5
RTN3-205ENST00000356000 IGKV3-15P01624 115 aa11.94□□□□□ -0.5
RTN3-205ENST00000356000 FAM19A4Q96LR4 140 aa11.94□□□□□ -0.5
RTN3-205ENST00000356000 DSCR8Q96T75 97 aa11.94□□□□□ -0.5
RTN3-205ENST00000356000 AGPAT4-IT1Q9H0P7 198 aa11.94□□□□□ -0.5
RTN3-205ENST00000356000 ATRXP46100 2492 aa11.94□□□□□ -0.5
RTN3-205ENST00000356000 ABCA1O95477 2261 aa11.94□□□□□ -0.5
RTN3-205ENST00000356000 TSHBP01222 138 aa11.94□□□□□ -0.5
RTN3-205ENST00000356000 COX6CP09669 75 aa11.94□□□□□ -0.5
RTN3-205ENST00000356000 GAFA1Q96PS6 74 aa11.94□□□□□ -0.5
RTN3-205ENST00000356000 J3QLI3 93 aa11.93□□□□□ -0.5
RTN3-205ENST00000356000 MALP21145 153 aa11.93□□□□□ -0.5
RTN3-205ENST00000356000 ZGRF1Q86YA3 2104 aa11.93□□□□□ -0.5
RTN3-205ENST00000356000 EEF1AKMT3Q96AZ1 226 aa11.93□□□□□ -0.5
RTN3-205ENST00000356000 PRO0628Q9UI54 55 aa11.93□□□□□ -0.5
RTN3-205ENST00000356000 PYGO1Q9Y3Y4 419 aa11.93□□□□□ -0.5
RTN3-205ENST00000356000 DNAJC13O75165 2243 aa11.93□□□□□ -0.5
RTN3-205ENST00000356000 TEX22C9J3V5 150 aa11.93□□□□□ -0.5
RTN3-205ENST00000356000 PIMREGQ9BSJ6 248 aa11.93□□□□□ -0.5
RTN3-205ENST00000356000 AKAP13Q12802 2813 aa11.93□□□□□ -0.5
RTN3-205ENST00000356000 UBE2E1P51965 193 aa11.92□□□□□ -0.5
RTN3-205ENST00000356000 C11orf21Q9P2W6 132 aa11.92□□□□□ -0.5
RTN3-205ENST00000356000 FOLR3P41439 243 aa11.92□□□□□ -0.5
RTN3-205ENST00000356000 DCANP1Q8TF63 244 aa11.92□□□□□ -0.5
RTN3-205ENST00000356000 RNF223E7ERA6 249 aa11.91□□□□□ -0.5
RTN3-205ENST00000356000 CLEC2BQ92478 149 aa11.91□□□□□ -0.5
RTN3-205ENST00000356000 LINC00477Q96M19 166 aa11.91□□□□□ -0.5
RTN3-205ENST00000356000 APC2O95996 2303 aa11.91□□□□□ -0.5
RTN3-205ENST00000356000 IGHV1-69DA0A0B4J2H0 117 aa11.91□□□□□ -0.5
RTN3-205ENST00000356000 UPK3BQ9BT76 320 aa11.91□□□□□ -0.5
RTN3-205ENST00000356000 SPRY2O43597 315 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms