RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 LY6G6EA0A0G2JKS1 128 aa11.57□□□□□ -0.56
LMX1B-201ENST00000355497 RNF183Q96D59 192 aa11.57□□□□□ -0.56
LMX1B-201ENST00000355497 U3KQA8 63 aa11.57□□□□□ -0.56
LMX1B-201ENST00000355497 I3L2K1 104 aa11.57□□□□□ -0.56
LMX1B-201ENST00000355497 ANKRD39Q53RE8 183 aa11.57□□□□□ -0.56
LMX1B-201ENST00000355497 CDPF1Q6NVV7 123 aa11.57□□□□□ -0.56
LMX1B-201ENST00000355497 H0Y9J4 135 aa11.57□□□□□ -0.56
LMX1B-201ENST00000355497 DOCK3Q8IZD9 2030 aa11.57□□□□□ -0.56
LMX1B-201ENST00000355497 F8W735 103 aaPredicted RBP11.57□□□□□ -0.56
LMX1B-201ENST00000355497 DAND5Q8N907 189 aa11.57□□□□□ -0.56
LMX1B-201ENST00000355497 FANCMQ8IYD8 2048 aa11.57□□□□□ -0.56
LMX1B-201ENST00000355497 LGALS9O00182 355 aa11.56□□□□□ -0.56
LMX1B-201ENST00000355497 TAX1BP3O14907 124 aa11.56□□□□□ -0.56
LMX1B-201ENST00000355497 LINC00173Q6ZV60 143 aa11.56□□□□□ -0.56
LMX1B-201ENST00000355497 AJUBAQ96IF1 538 aa11.56□□□□□ -0.56
LMX1B-201ENST00000355497 TET1Q8NFU7 2136 aa11.56□□□□□ -0.56
LMX1B-201ENST00000355497 C16orf54Q6UWD8 224 aa11.56□□□□□ -0.56
LMX1B-201ENST00000355497 TOMM6Q96B49 74 aa11.56□□□□□ -0.56
LMX1B-201ENST00000355497 HIGD2BQ4VC39 106 aa11.56□□□□□ -0.56
LMX1B-201ENST00000355497 CXCL5P42830 114 aa11.55□□□□□ -0.56
LMX1B-201ENST00000355497 CRYGBP07316 175 aa11.55□□□□□ -0.56
LMX1B-201ENST00000355497 MRPL55Q7Z7F7 128 aaKnown RBP11.55□□□□□ -0.56
LMX1B-201ENST00000355497 LECT2O14960 151 aa11.55□□□□□ -0.56
LMX1B-201ENST00000355497 MSRB1Q9NZV6 116 aa11.55□□□□□ -0.56
LMX1B-201ENST00000355497 FAM186AA6NE01 2351 aa11.55□□□□□ -0.56
LMX1B-201ENST00000355497 DIRC1Q969H9 104 aa11.55□□□□□ -0.56
LMX1B-201ENST00000355497 HIGD1BQ9P298 99 aa11.55□□□□□ -0.56
LMX1B-201ENST00000355497 MYO7BQ6PIF6 2116 aa11.55□□□□□ -0.56
LMX1B-201ENST00000355497 IGHV7-81A0A0B4J1V7 117 aa11.54□□□□□ -0.56
LMX1B-201ENST00000355497 IGKV4-1P06312 121 aa11.54□□□□□ -0.56
LMX1B-201ENST00000355497 YLPM1P49750 1951 aaKnown RBP11.54□□□□□ -0.56
LMX1B-201ENST00000355497 TRBV10-2A0A0K0K1G8 114 aa11.54□□□□□ -0.56
LMX1B-201ENST00000355497 TRBV12-3P01733 135 aa11.54□□□□□ -0.56
LMX1B-201ENST00000355497 ZNF524Q96C55 264 aa11.54□□□□□ -0.56
LMX1B-201ENST00000355497 SCN5AQ14524 2016 aa11.54□□□□□ -0.56
LMX1B-201ENST00000355497 IGLV11-55A0A075B6I3 123 aa11.54□□□□□ -0.56
LMX1B-201ENST00000355497 PRSS33Q8NF86 280 aa11.54□□□□□ -0.56
LMX1B-201ENST00000355497 FXYD2P54710 66 aa11.54□□□□□ -0.56
LMX1B-201ENST00000355497 RPL39P62891 51 aaKnown RBP11.54□□□□□ -0.56
LMX1B-201ENST00000355497 C11orf53Q8IXP5 236 aa11.54□□□□□ -0.56
LMX1B-201ENST00000355497 CACNA1DQ01668 2161 aa11.53□□□□□ -0.56
LMX1B-201ENST00000355497 TRBV7-3A0A075B6L6 115 aa11.53□□□□□ -0.56
LMX1B-201ENST00000355497 K7EIM0 57 aa11.53□□□□□ -0.56
LMX1B-201ENST00000355497 COA6Q5JTJ3 125 aaKnown RBP11.53□□□□□ -0.56
LMX1B-201ENST00000355497 SEM1Q6ZVN7 128 aa11.53□□□□□ -0.56
LMX1B-201ENST00000355497 FOXI1Q12951 378 aa11.53□□□□□ -0.56
LMX1B-201ENST00000355497 CLEC2BQ92478 149 aa11.53□□□□□ -0.56
LMX1B-201ENST00000355497 HHLA3Q9XRX5 114 aa11.53□□□□□ -0.56
LMX1B-201ENST00000355497 PTPRDP23468 1912 aa11.53□□□□□ -0.56
LMX1B-201ENST00000355497 CASC2Q6XLA1 102 aa11.53□□□□□ -0.56
LMX1B-201ENST00000355497 C11orf86A6NJI1 115 aa11.52□□□□□ -0.56
LMX1B-201ENST00000355497 IGHV4-38-2P0DP08 117 aa11.52□□□□□ -0.56
LMX1B-201ENST00000355497 Q8N1Y9 231 aa11.52□□□□□ -0.57
LMX1B-201ENST00000355497 FGF23Q9GZV9 251 aaPredicted RBP11.52□□□□□ -0.57
LMX1B-201ENST00000355497 ESM1Q9NQ30 184 aa11.52□□□□□ -0.57
LMX1B-201ENST00000355497 SPTA1P02549 2419 aa11.52□□□□□ -0.57
LMX1B-201ENST00000355497 WFDC2Q14508 124 aa11.52□□□□□ -0.57
LMX1B-201ENST00000355497 NUPR1O60356 82 aa11.51□□□□□ -0.57
LMX1B-201ENST00000355497 TM2D2Q9BX73 214 aa11.51□□□□□ -0.57
LMX1B-201ENST00000355497 E9PLD3 99 aa11.51□□□□□ -0.57
LMX1B-201ENST00000355497 CTSGP08311 255 aa11.51□□□□□ -0.57
LMX1B-201ENST00000355497 RITA1Q96K30 269 aa11.51□□□□□ -0.57
LMX1B-201ENST00000355497 SDK2Q58EX2 2172 aa11.51□□□□□ -0.57
LMX1B-201ENST00000355497 TMEM256-PLSCR3K7ERE1 68 aa11.51□□□□□ -0.57
LMX1B-201ENST00000355497 K7ERS5 55 aa11.51□□□□□ -0.57
LMX1B-201ENST00000355497 Q8NFD4 153 aa11.51□□□□□ -0.57
LMX1B-201ENST00000355497 DEFB113Q30KQ7 82 aa11.5□□□□□ -0.57
LMX1B-201ENST00000355497 FANCD2OSQ96PS1 177 aa11.5□□□□□ -0.57
LMX1B-201ENST00000355497 MED14OSP0DP75 135 aa11.5□□□□□ -0.57
LMX1B-201ENST00000355497 WI2-2373I1.2A0A1W2PRP0 233 aa11.5□□□□□ -0.57
LMX1B-201ENST00000355497 PATE2Q6UY27 113 aa11.5□□□□□ -0.57
LMX1B-201ENST00000355497 SPAG11BQ08648 103 aa11.5□□□□□ -0.57
LMX1B-201ENST00000355497 IGHV4OR15-8A0A075B7B6 117 aa11.5□□□□□ -0.57
LMX1B-201ENST00000355497 A0A087WW49 117 aa11.5□□□□□ -0.57
LMX1B-201ENST00000355497 H3BT86 120 aa11.5□□□□□ -0.57
LMX1B-201ENST00000355497 FAM110AQ9BQ89 295 aa11.5□□□□□ -0.57
LMX1B-201ENST00000355497 SPRNQ5BIV9 151 aa11.49□□□□□ -0.57
LMX1B-201ENST00000355497 MPLKIPQ8TAP9 179 aa11.49□□□□□ -0.57
LMX1B-201ENST00000355497 RTTNQ86VV8 2226 aa11.49□□□□□ -0.57
LMX1B-201ENST00000355497 GTSF1Q8WW33 167 aa11.49□□□□□ -0.57
LMX1B-201ENST00000355497 IGHV4-61A0A0C4DH41 118 aa11.48□□□□□ -0.57
LMX1B-201ENST00000355497 PLXNA3P51805 1871 aa11.48□□□□□ -0.57
LMX1B-201ENST00000355497 B9D2Q9BPU9 175 aa11.48□□□□□ -0.57
LMX1B-201ENST00000355497 IGKV1-17P01599 117 aa11.48□□□□□ -0.57
LMX1B-201ENST00000355497 PLA2G2CQ5R387 149 aa11.48□□□□□ -0.57
LMX1B-201ENST00000355497 GRNP28799 593 aaKnown RBP11.47□□□□□ -0.57
LMX1B-201ENST00000355497 MIR7-3HGQ8N6C7 128 aa11.47□□□□□ -0.57
LMX1B-201ENST00000355497 PRAC2D3DTV9 90 aa11.47□□□□□ -0.57
LMX1B-201ENST00000355497 PDE6GP18545 87 aa11.47□□□□□ -0.57
LMX1B-201ENST00000355497 BLCAPP62952 87 aa11.47□□□□□ -0.57
LMX1B-201ENST00000355497 TDRG1Q3Y452 100 aa11.47□□□□□ -0.57
LMX1B-201ENST00000355497 C5orf56Q8N8D9 126 aa11.47□□□□□ -0.57
LMX1B-201ENST00000355497 C2orf70A6NJV1 201 aa11.47□□□□□ -0.57
LMX1B-201ENST00000355497 COX7BP24311 80 aa11.47□□□□□ -0.57
LMX1B-201ENST00000355497 IGHV1-58A0A0C4DH39 117 aa11.47□□□□□ -0.57
LMX1B-201ENST00000355497 UPK3BQ9BT76 320 aa11.47□□□□□ -0.57
LMX1B-201ENST00000355497 TTTY13Q9BZ97 58 aa11.47□□□□□ -0.57
LMX1B-201ENST00000355497 IGHV4-30-2A0A087WSY4 118 aa11.46□□□□□ -0.57
LMX1B-201ENST00000355497 TRPM7Q96QT4 1865 aa11.46□□□□□ -0.57
LMX1B-201ENST00000355497 TEX22C9J3V5 150 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms