RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 IGHV3-30-5P0DP03 117 aa7.48□□□□□ -1.21
GABPA-201ENST00000354828 SCGB1A1P11684 91 aa7.48□□□□□ -1.21
GABPA-201ENST00000354828 NKAPP1Q8N9T2 125 aa7.48□□□□□ -1.21
GABPA-201ENST00000354828 E7EUB6 86 aa7.48□□□□□ -1.21
GABPA-201ENST00000354828 LINC01559Q495D7 138 aa7.48□□□□□ -1.21
GABPA-201ENST00000354828 TIMM21Q9BVV7 248 aa7.48□□□□□ -1.21
GABPA-201ENST00000354828 GAGE10A6NGK3 116 aa7.48□□□□□ -1.21
GABPA-201ENST00000354828 INS-IGF2F8WCM5 200 aa7.48□□□□□ -1.21
GABPA-201ENST00000354828 ATRAIDQ6UW56 229 aa7.48□□□□□ -1.21
GABPA-201ENST00000354828 RBAKDNA6NC62 111 aa7.48□□□□□ -1.21
GABPA-201ENST00000354828 IGF1P05019 195 aa7.48□□□□□ -1.21
GABPA-201ENST00000354828 ATP6V0E2Q8NHE4 81 aa7.48□□□□□ -1.21
GABPA-201ENST00000354828 ZNF625Q96I27 306 aaPredicted RBP7.48□□□□□ -1.21
GABPA-201ENST00000354828 SPATA25Q9BR10 227 aa7.48□□□□□ -1.21
GABPA-201ENST00000354828 CBY1Q9Y3M2 126 aa7.48□□□□□ -1.21
GABPA-201ENST00000354828 COL5A1-AS1Q5SY13 56 aa7.47□□□□□ -1.21
GABPA-201ENST00000354828 SH2D6Q7Z4S9 175 aa7.47□□□□□ -1.21
GABPA-201ENST00000354828 FANCD2OSQ96PS1 177 aa7.47□□□□□ -1.21
GABPA-201ENST00000354828 MYMXA0A1B0GTQ4 84 aa7.47□□□□□ -1.21
GABPA-201ENST00000354828 EML5Q05BV3 1969 aa7.47□□□□□ -1.21
GABPA-201ENST00000354828 NUP210LQ5VU65 1888 aa7.47□□□□□ -1.21
GABPA-201ENST00000354828 FAM104BQ5XKR9 115 aa7.47□□□□□ -1.21
GABPA-201ENST00000354828 C2orf66Q6UXQ4 117 aa7.47□□□□□ -1.21
GABPA-201ENST00000354828 ZNF295-AS1Q8N0V1 137 aa7.47□□□□□ -1.21
GABPA-201ENST00000354828 C5orf30Q96GV9 206 aa7.47□□□□□ -1.21
GABPA-201ENST00000354828 FAM231BA6NCW3 169 aa7.47□□□□□ -1.21
GABPA-201ENST00000354828 ZNF726P1Q15940 193 aa7.47□□□□□ -1.21
GABPA-201ENST00000354828 TMEM238C9JI98 176 aa7.46□□□□□ -1.21
GABPA-201ENST00000354828 LBHQ53QV2 105 aaPredicted RBP7.46□□□□□ -1.21
GABPA-201ENST00000354828 C10orf99Q6UWK7 81 aa7.46□□□□□ -1.21
GABPA-201ENST00000354828 LYPD6Q86Y78 171 aa7.46□□□□□ -1.21
GABPA-201ENST00000354828 MAP6D1Q9H9H5 199 aa7.46□□□□□ -1.21
GABPA-201ENST00000354828 F8WEM9 126 aa7.46□□□□□ -1.22
GABPA-201ENST00000354828 PFN2P35080 140 aa7.46□□□□□ -1.22
GABPA-201ENST00000354828 DEFB1P60022 68 aa7.46□□□□□ -1.22
GABPA-201ENST00000354828 CT83Q5H943 113 aa7.46□□□□□ -1.22
GABPA-201ENST00000354828 RNF183Q96D59 192 aa7.46□□□□□ -1.22
GABPA-201ENST00000354828 MKI67P46013 3256 aaKnown RBP7.46□□□□□ -1.22
GABPA-201ENST00000354828 PRSS29PA6NIE9 313 aa7.46□□□□□ -1.22
GABPA-201ENST00000354828 UBE2CO00762 179 aa7.46□□□□□ -1.22
GABPA-201ENST00000354828 COL4A2P08572 1712 aa7.46□□□□□ -1.22
GABPA-201ENST00000354828 TRBV24-1A0A075B6N3 115 aa7.46□□□□□ -1.22
GABPA-201ENST00000354828 UTF1Q5T230 341 aa7.46□□□□□ -1.22
GABPA-201ENST00000354828 SFTA2Q6UW10 78 aa7.46□□□□□ -1.22
GABPA-201ENST00000354828 XCL1P47992 114 aa7.45□□□□□ -1.22
GABPA-201ENST00000354828 GATD1Q8NB37 220 aa7.45□□□□□ -1.22
GABPA-201ENST00000354828 FAM110AQ9BQ89 295 aa7.45□□□□□ -1.22
GABPA-201ENST00000354828 UBE2BP63146 152 aa7.45□□□□□ -1.22
GABPA-201ENST00000354828 LINC00482Q8N8I6 264 aa7.45□□□□□ -1.22
GABPA-201ENST00000354828 LINC00574Q9H8X3 128 aa7.45□□□□□ -1.22
GABPA-201ENST00000354828 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.45□□□□□ -1.22
GABPA-201ENST00000354828 NXPH4O95158 308 aa7.45□□□□□ -1.22
GABPA-201ENST00000354828 PRB2P02812 416 aaPredicted RBP7.45□□□□□ -1.22
GABPA-201ENST00000354828 PAX2Q02962 417 aa7.45□□□□□ -1.22
GABPA-201ENST00000354828 HHLA3Q9XRX5 114 aa7.45□□□□□ -1.22
GABPA-201ENST00000354828 ARHGAP21Q5T5U3 1957 aa7.45□□□□□ -1.22
GABPA-201ENST00000354828 WI2-2373I1.2A0A1W2PRP0 233 aa7.45□□□□□ -1.22
GABPA-201ENST00000354828 CCDC140Q96MF4 163 aa7.45□□□□□ -1.22
GABPA-201ENST00000354828 CXCL1P09341 107 aa7.44□□□□□ -1.22
GABPA-201ENST00000354828 ASPHD1Q5U4P2 390 aa7.44□□□□□ -1.22
GABPA-201ENST00000354828 ZNF702PQ9H963 129 aa7.44□□□□□ -1.22
GABPA-201ENST00000354828 PROP1O75360 226 aa7.44□□□□□ -1.22
GABPA-201ENST00000354828 TSPAN13O95857 204 aa7.44□□□□□ -1.22
GABPA-201ENST00000354828 EGR2P11161 476 aaPredicted RBP7.44□□□□□ -1.22
GABPA-201ENST00000354828 DEFB114Q30KQ6 69 aa7.44□□□□□ -1.22
GABPA-201ENST00000354828 PSMG3-AS1Q96PY0 264 aa7.44□□□□□ -1.22
GABPA-201ENST00000354828 MRPL51Q4U2R6 128 aaKnown RBP7.44□□□□□ -1.22
GABPA-201ENST00000354828 CHAC1Q9BUX1 264 aa7.44□□□□□ -1.22
GABPA-201ENST00000354828 K7EQD1 137 aa7.44□□□□□ -1.22
GABPA-201ENST00000354828 AVPP01185 164 aa7.44□□□□□ -1.22
GABPA-201ENST00000354828 PMVKQ15126 192 aa7.44□□□□□ -1.22
GABPA-201ENST00000354828 PATE2Q6UY27 113 aa7.43□□□□□ -1.22
GABPA-201ENST00000354828 LEPROTO15243 131 aa7.43□□□□□ -1.22
GABPA-201ENST00000354828 CDK2AP2O75956 126 aa7.43□□□□□ -1.22
GABPA-201ENST00000354828 Q8N8P6 123 aa7.43□□□□□ -1.22
GABPA-201ENST00000354828 TMEM141Q96I45 108 aa7.43□□□□□ -1.22
GABPA-201ENST00000354828 MRPL36Q9P0J6 103 aaKnown RBP7.43□□□□□ -1.22
GABPA-201ENST00000354828 IGLV10-54A0A075B6I4 117 aa7.43□□□□□ -1.22
GABPA-201ENST00000354828 PRAC2D3DTV9 90 aa7.43□□□□□ -1.22
GABPA-201ENST00000354828 RNASE13Q5GAN3 156 aaKnown RBP7.43□□□□□ -1.22
GABPA-201ENST00000354828 Q8N1Y9 231 aa7.43□□□□□ -1.22
GABPA-201ENST00000354828 CHD9Q3L8U1 2897 aa7.43□□□□□ -1.22
GABPA-201ENST00000354828 A0A1W2PPR1 153 aa7.43□□□□□ -1.22
GABPA-201ENST00000354828 TM2D2Q9BX73 214 aa7.43□□□□□ -1.22
GABPA-201ENST00000354828 LAMA3Q16787 3333 aa7.43□□□□□ -1.22
GABPA-201ENST00000354828 FLNBO75369 2602 aaKnown RBP7.42□□□□□ -1.22
GABPA-201ENST00000354828 LTAP01374 205 aa7.42□□□□□ -1.22
GABPA-201ENST00000354828 AMTNQ6UX39 209 aa7.42□□□□□ -1.22
GABPA-201ENST00000354828 NHP2Q9NX24 153 aaKnown RBP7.42□□□□□ -1.22
GABPA-201ENST00000354828 POLQO75417 2590 aa7.42□□□□□ -1.22
GABPA-201ENST00000354828 FN1P02751 2386 aaKnown RBP7.42□□□□□ -1.22
GABPA-201ENST00000354828 HIST1H2BKO60814 126 aa7.42□□□□□ -1.22
GABPA-201ENST00000354828 IGLV2-14P01704 120 aa7.42□□□□□ -1.22
GABPA-201ENST00000354828 HIST1H2BJP06899 126 aa7.42□□□□□ -1.22
GABPA-201ENST00000354828 HIST1H2BOP23527 126 aa7.42□□□□□ -1.22
GABPA-201ENST00000354828 HIST1H2BBP33778 126 aa7.42□□□□□ -1.22
GABPA-201ENST00000354828 HIST1H2BDP58876 126 aa7.42□□□□□ -1.22
GABPA-201ENST00000354828 HIST1H2BCP62807 126 aa7.42□□□□□ -1.22
GABPA-201ENST00000354828 HIST2H2BEQ16778 126 aa7.42□□□□□ -1.22
GABPA-201ENST00000354828 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms