RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 PIFOQ8TCI5 191 aa10.56□□□□□ -0.72
SMC6-201ENST00000351948 SMIM27A0A1W2PRY6 76 aa10.56□□□□□ -0.72
SMC6-201ENST00000351948 A8MWV9 139 aa10.56□□□□□ -0.72
SMC6-201ENST00000351948 SYS1-DBNDD2H3BUS1 97 aa10.56□□□□□ -0.72
SMC6-201ENST00000351948 P0C879 139 aa10.56□□□□□ -0.72
SMC6-201ENST00000351948 FAM231BA6NCW3 169 aa10.56□□□□□ -0.72
SMC6-201ENST00000351948 GATA1P15976 413 aaPredicted RBP10.56□□□□□ -0.72
SMC6-201ENST00000351948 MSRB1Q9NZV6 116 aa10.56□□□□□ -0.72
SMC6-201ENST00000351948 LAMTOR2Q9Y2Q5 125 aa10.56□□□□□ -0.72
SMC6-201ENST00000351948 PYY3Q5JQD4 70 aa10.56□□□□□ -0.72
SMC6-201ENST00000351948 CLPSL2Q6UWE3 100 aa10.56□□□□□ -0.72
SMC6-201ENST00000351948 SMR3AQ99954 134 aa10.56□□□□□ -0.72
SMC6-201ENST00000351948 NAA38Q9BRA0 125 aaKnown RBP10.56□□□□□ -0.72
SMC6-201ENST00000351948 WI2-2373I1.2A0A1W2PRP0 233 aa10.55□□□□□ -0.72
SMC6-201ENST00000351948 C6orf226Q5I0X4 101 aa10.55□□□□□ -0.72
SMC6-201ENST00000351948 C9orf66Q5T8R8 295 aa10.55□□□□□ -0.72
SMC6-201ENST00000351948 MRPL53Q96EL3 112 aaKnown RBP10.55□□□□□ -0.72
SMC6-201ENST00000351948 IGKV1D-37A0A075B6S9 117 aa10.54□□□□□ -0.72
SMC6-201ENST00000351948 LYPD6BQ8NI32 183 aa10.54□□□□□ -0.72
SMC6-201ENST00000351948 Q6YL49 198 aa10.54□□□□□ -0.72
SMC6-201ENST00000351948 H3BUT2 72 aa10.54□□□□□ -0.72
SMC6-201ENST00000351948 ZNF295-AS1Q8N0V1 137 aa10.54□□□□□ -0.72
SMC6-201ENST00000351948 MEGF9Q9H1U4 602 aa10.53□□□□□ -0.72
SMC6-201ENST00000351948 LY6G6DO95868 133 aa10.53□□□□□ -0.72
SMC6-201ENST00000351948 COL5A1P20908 1838 aaPredicted RBP10.53□□□□□ -0.72
SMC6-201ENST00000351948 VWC2LB2RUY7 222 aa10.53□□□□□ -0.72
SMC6-201ENST00000351948 SIGLEC8Q9NYZ4 499 aa10.53□□□□□ -0.72
SMC6-201ENST00000351948 PLP1P60201 277 aa10.52□□□□□ -0.72
SMC6-201ENST00000351948 GPHB5Q86YW7 130 aa10.52□□□□□ -0.72
SMC6-201ENST00000351948 TRBV25-1A0A075B6N4 114 aa10.52□□□□□ -0.73
SMC6-201ENST00000351948 I3L3M4 83 aa10.52□□□□□ -0.73
SMC6-201ENST00000351948 AVPP01185 164 aa10.52□□□□□ -0.73
SMC6-201ENST00000351948 PLNP26678 52 aa10.52□□□□□ -0.73
SMC6-201ENST00000351948 DEFB135Q30KP9 77 aa10.52□□□□□ -0.73
SMC6-201ENST00000351948 Q6ZS46 218 aa10.52□□□□□ -0.73
SMC6-201ENST00000351948 ADAMTSL5Q6ZMM2 481 aa10.52□□□□□ -0.73
SMC6-201ENST00000351948 C11orf1Q9H5F2 150 aa10.52□□□□□ -0.73
SMC6-201ENST00000351948 A0A087X0K7 114 aa10.52□□□□□ -0.73
SMC6-201ENST00000351948 M0R2P5 195 aa10.52□□□□□ -0.73
SMC6-201ENST00000351948 PAX4O43316 350 aa10.52□□□□□ -0.73
SMC6-201ENST00000351948 LY6LH3BQJ8 138 aa10.51□□□□□ -0.73
SMC6-201ENST00000351948 C4orf3Q8WVX3 66 aa10.51□□□□□ -0.73
SMC6-201ENST00000351948 PYGO2Q9BRQ0 406 aa10.51□□□□□ -0.73
SMC6-201ENST00000351948 INS-IGF2F8WCM5 200 aa10.51□□□□□ -0.73
SMC6-201ENST00000351948 CD5LO43866 347 aa10.51□□□□□ -0.73
SMC6-201ENST00000351948 EIF4EBP1Q13541 118 aaPredicted RBP10.51□□□□□ -0.73
SMC6-201ENST00000351948 C10orf91Q5T1B1 145 aa10.51□□□□□ -0.73
SMC6-201ENST00000351948 MRPS16Q9Y3D3 137 aaKnown RBP10.51□□□□□ -0.73
SMC6-201ENST00000351948 IGHG4P01861 327 aa10.5□□□□□ -0.73
SMC6-201ENST00000351948 Q8N8P6 123 aa10.5□□□□□ -0.73
SMC6-201ENST00000351948 Q6ZSV7 163 aa10.5□□□□□ -0.73
SMC6-201ENST00000351948 PRIMA1Q86XR5 153 aa10.5□□□□□ -0.73
SMC6-201ENST00000351948 HCFC1P51610 2035 aa10.5□□□□□ -0.73
SMC6-201ENST00000351948 HECTD1Q9ULT8 2610 aa10.5□□□□□ -0.73
SMC6-201ENST00000351948 CHAC1Q9BUX1 264 aa10.5□□□□□ -0.73
SMC6-201ENST00000351948 HLA-DRB4P13762 266 aa10.5□□□□□ -0.73
SMC6-201ENST00000351948 Q0VG73 95 aa10.5□□□□□ -0.73
SMC6-201ENST00000351948 HLA-DRB4X5D2U9 266 aa10.5□□□□□ -0.73
SMC6-201ENST00000351948 SS18Q15532 418 aa10.49□□□□□ -0.73
SMC6-201ENST00000351948 TIMM21Q9BVV7 248 aa10.49□□□□□ -0.73
SMC6-201ENST00000351948 SMIM2Q9BVW6 85 aa10.49□□□□□ -0.73
SMC6-201ENST00000351948 ZMAT4Q9H898 229 aa10.49□□□□□ -0.73
SMC6-201ENST00000351948 NDUFAF3Q9BU61 184 aa10.49□□□□□ -0.73
SMC6-201ENST00000351948 Q8N1Y9 231 aa10.49□□□□□ -0.73
SMC6-201ENST00000351948 ZNF503Q96F45 646 aa10.49□□□□□ -0.73
SMC6-201ENST00000351948 RBAKDNA6NC62 111 aa10.49□□□□□ -0.73
SMC6-201ENST00000351948 RPL39LQ96EH5 51 aaKnown RBP10.49□□□□□ -0.73
SMC6-201ENST00000351948 TMEM243Q9BU79 118 aa10.49□□□□□ -0.73
SMC6-201ENST00000351948 IGHV1-24A0A0C4DH33 117 aa10.48□□□□□ -0.73
SMC6-201ENST00000351948 A0A1B0GV72 72 aa10.48□□□□□ -0.73
SMC6-201ENST00000351948 LINC01549A6NIU2 74 aa10.48□□□□□ -0.73
SMC6-201ENST00000351948 IGLC2P0DOY2 106 aa10.48□□□□□ -0.73
SMC6-201ENST00000351948 MYCNOSP40205 109 aa10.48□□□□□ -0.73
SMC6-201ENST00000351948 DEFB125Q8N687 156 aa10.48□□□□□ -0.73
SMC6-201ENST00000351948 MORN3Q6PF18 240 aaPredicted RBP10.48□□□□□ -0.73
SMC6-201ENST00000351948 K7EMT4 169 aa10.48□□□□□ -0.73
SMC6-201ENST00000351948 RASL10AQ92737 203 aa10.48□□□□□ -0.73
SMC6-201ENST00000351948 SPCS1Q9Y6A9 102 aa10.48□□□□□ -0.73
SMC6-201ENST00000351948 ANGP03950 147 aaKnown RBP10.48□□□□□ -0.73
SMC6-201ENST00000351948 Q6ZQT7 251 aa10.48□□□□□ -0.73
SMC6-201ENST00000351948 FSTL3O95633 263 aa10.47□□□□□ -0.73
SMC6-201ENST00000351948 TMEM86BQ8N661 226 aa10.47□□□□□ -0.73
SMC6-201ENST00000351948 XIRP2A4UGR9 3374 aa10.47□□□□□ -0.73
SMC6-201ENST00000351948 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.47□□□□□ -0.73
SMC6-201ENST00000351948 IGKV2-29A2NJV5 120 aaPredicted RBP10.47□□□□□ -0.73
SMC6-201ENST00000351948 IGF1P05019 195 aa10.47□□□□□ -0.73
SMC6-201ENST00000351948 CRLF1O75462 422 aa10.47□□□□□ -0.73
SMC6-201ENST00000351948 S100A7L2Q5SY68 101 aa10.47□□□□□ -0.73
SMC6-201ENST00000351948 LENEPQ9Y5L5 61 aa10.47□□□□□ -0.73
SMC6-201ENST00000351948 RBMY1BA6NDE4 496 aaKnown RBP10.46□□□□□ -0.73
SMC6-201ENST00000351948 RBMY1EA6NEQ0 496 aaKnown RBP10.46□□□□□ -0.73
SMC6-201ENST00000351948 CRYGBP07316 175 aa10.46□□□□□ -0.73
SMC6-201ENST00000351948 RBMY1DP0C7P1 496 aaKnown RBP10.46□□□□□ -0.73
SMC6-201ENST00000351948 FRMD6-AS1P0C7T7 363 aa10.46□□□□□ -0.73
SMC6-201ENST00000351948 RBMY1A1P0DJD3 496 aaKnown RBP10.46□□□□□ -0.73
SMC6-201ENST00000351948 RBMY1CP0DJD4 496 aa10.46□□□□□ -0.73
SMC6-201ENST00000351948 SEC11AP67812 179 aa10.46□□□□□ -0.73
SMC6-201ENST00000351948 CDH23Q9H251 3354 aa10.46□□□□□ -0.74
SMC6-201ENST00000351948 A0A1B0GWB2 263 aa10.46□□□□□ -0.74
SMC6-201ENST00000351948 PFN2P35080 140 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms