RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 TSPOP30536 169 aa12.47□□□□□ -0.41
SAMM50-201ENST00000350028 ADAMTSL5Q6ZMM2 481 aa12.47□□□□□ -0.41
SAMM50-201ENST00000350028 Q6ZN92 141 aa12.47□□□□□ -0.41
SAMM50-201ENST00000350028 NRACQ8N912 160 aa12.47□□□□□ -0.41
SAMM50-201ENST00000350028 OR1N2Q8NGR9 330 aa12.47□□□□□ -0.41
SAMM50-201ENST00000350028 WFDC12Q8WWY7 111 aa12.47□□□□□ -0.41
SAMM50-201ENST00000350028 DPH3P1Q9H4G8 78 aa12.47□□□□□ -0.41
SAMM50-201ENST00000350028 H0Y8G0 127 aa12.46□□□□□ -0.41
SAMM50-201ENST00000350028 HNRNPA3P51991 378 aaKnown RBP12.46□□□□□ -0.41
SAMM50-201ENST00000350028 FOXI2Q6ZQN5 318 aa12.46□□□□□ -0.41
SAMM50-201ENST00000350028 OR11H1Q8NG94 326 aa12.46□□□□□ -0.41
SAMM50-201ENST00000350028 IGLV2-18A0A075B6J9 118 aa12.45□□□□□ -0.42
SAMM50-201ENST00000350028 TRAV2A0A0B4J234 112 aa12.45□□□□□ -0.42
SAMM50-201ENST00000350028 DEFB136Q30KP8 78 aa12.45□□□□□ -0.42
SAMM50-201ENST00000350028 IFI27L1Q96BM0 104 aa12.45□□□□□ -0.42
SAMM50-201ENST00000350028 ACANP16112 2415 aa12.45□□□□□ -0.42
SAMM50-201ENST00000350028 TRAV12-3A0A0B4J271 114 aa12.45□□□□□ -0.42
SAMM50-201ENST00000350028 NXPH4O95158 308 aa12.45□□□□□ -0.42
SAMM50-201ENST00000350028 LGALS9BQ3B8N2 356 aa12.45□□□□□ -0.42
SAMM50-201ENST00000350028 LGALS9CQ6DKI2 356 aa12.45□□□□□ -0.42
SAMM50-201ENST00000350028 A0A1B0GV90 55 aa12.44□□□□□ -0.42
SAMM50-201ENST00000350028 FXYD7P58549 80 aa12.44□□□□□ -0.42
SAMM50-201ENST00000350028 KRTAP1-1Q07627 177 aa12.44□□□□□ -0.42
SAMM50-201ENST00000350028 KHDC1LQ5JSQ8 128 aa12.44□□□□□ -0.42
SAMM50-201ENST00000350028 OR9G4Q8NGQ1 327 aa12.44□□□□□ -0.42
SAMM50-201ENST00000350028 AP1S3Q96PC3 154 aa12.44□□□□□ -0.42
SAMM50-201ENST00000350028 MCRIP2Q9BUT9 160 aaKnown RBP12.44□□□□□ -0.42
SAMM50-201ENST00000350028 YAE1D1Q9NRH1 226 aa12.44□□□□□ -0.42
SAMM50-201ENST00000350028 TRAV26-2A0A0B4J265 109 aa12.43□□□□□ -0.42
SAMM50-201ENST00000350028 hDV102S1A0JD36 115 aa12.43□□□□□ -0.42
SAMM50-201ENST00000350028 CDKN1BP46527 198 aa12.43□□□□□ -0.42
SAMM50-201ENST00000350028 KLHL30-AS1Q8NEE0 82 aa12.43□□□□□ -0.42
SAMM50-201ENST00000350028 MRPS16Q9Y3D3 137 aaKnown RBP12.43□□□□□ -0.42
SAMM50-201ENST00000350028 TLN2Q9Y4G6 2542 aa12.43□□□□□ -0.42
SAMM50-201ENST00000350028 C14orf178Q8N769 122 aaPredicted RBP12.42□□□□□ -0.42
SAMM50-201ENST00000350028 CYSRT1A8MQ03 144 aa12.42□□□□□ -0.42
SAMM50-201ENST00000350028 SPRY2O43597 315 aa12.42□□□□□ -0.42
SAMM50-201ENST00000350028 IGKV3-20P01619 116 aa12.42□□□□□ -0.42
SAMM50-201ENST00000350028 CD7P09564 240 aa12.42□□□□□ -0.42
SAMM50-201ENST00000350028 POM121L12Q8N7R1 296 aa12.42□□□□□ -0.42
SAMM50-201ENST00000350028 PMCHL2Q9BQD1 86 aa12.42□□□□□ -0.42
SAMM50-201ENST00000350028 C20orf78Q9BR46 151 aa12.42□□□□□ -0.42
SAMM50-201ENST00000350028 MXRA5Q9NR99 2828 aa12.42□□□□□ -0.42
SAMM50-201ENST00000350028 PPP1R17O96001 155 aa12.41□□□□□ -0.42
SAMM50-201ENST00000350028 LAGE3Q14657 143 aa12.41□□□□□ -0.42
SAMM50-201ENST00000350028 DLX4Q92988 240 aaPredicted RBP12.41□□□□□ -0.42
SAMM50-201ENST00000350028 ESM1Q9NQ30 184 aa12.41□□□□□ -0.42
SAMM50-201ENST00000350028 GOLT1BQ9Y3E0 138 aa12.41□□□□□ -0.42
SAMM50-201ENST00000350028 SCGB2A2Q13296 93 aa12.4□□□□□ -0.42
SAMM50-201ENST00000350028 AMTNQ6UX39 209 aa12.4□□□□□ -0.42
SAMM50-201ENST00000350028 TMEM158Q8WZ71 300 aa12.4□□□□□ -0.42
SAMM50-201ENST00000350028 SMIM2Q9BVW6 85 aa12.4□□□□□ -0.42
SAMM50-201ENST00000350028 ANK3Q12955 4377 aaKnown RBP12.4□□□□□ -0.42
SAMM50-201ENST00000350028 MGPP08493 103 aa12.4□□□□□ -0.43
SAMM50-201ENST00000350028 NUTF2P61970 127 aaKnown RBP12.4□□□□□ -0.43
SAMM50-201ENST00000350028 SPINK13Q1W4C9 94 aa12.4□□□□□ -0.43
SAMM50-201ENST00000350028 DYNLRB2Q8TF09 96 aa12.4□□□□□ -0.43
SAMM50-201ENST00000350028 RASL10AQ92737 203 aa12.4□□□□□ -0.43
SAMM50-201ENST00000350028 DUX3Q96PT4 197 aa12.4□□□□□ -0.43
SAMM50-201ENST00000350028 TRAV12-2A0A075B6T6 113 aa12.39□□□□□ -0.43
SAMM50-201ENST00000350028 IGHV1OR15-1A0A075B7D0 117 aa12.39□□□□□ -0.43
SAMM50-201ENST00000350028 IGHV3-16A0A0C4DH30 117 aa12.39□□□□□ -0.43
SAMM50-201ENST00000350028 A8MTW9 85 aa12.39□□□□□ -0.43
SAMM50-201ENST00000350028 SMIM17P0DL12 118 aa12.39□□□□□ -0.43
SAMM50-201ENST00000350028 C9orf85Q96MD7 179 aa12.39□□□□□ -0.43
SAMM50-201ENST00000350028 KIF25-AS1Q9Y6Z4 181 aa12.39□□□□□ -0.43
SAMM50-201ENST00000350028 K7EMI3 77 aa12.38□□□□□ -0.43
SAMM50-201ENST00000350028 ATP5LO75964 103 aa12.38□□□□□ -0.43
SAMM50-201ENST00000350028 DEFB131AP59861 70 aa12.38□□□□□ -0.43
SAMM50-201ENST00000350028 SUMO2P61956 95 aaKnown RBP12.38□□□□□ -0.43
SAMM50-201ENST00000350028 SLC25A34Q6PIV7 304 aa12.38□□□□□ -0.43
SAMM50-201ENST00000350028 HIVEP1P15822 2718 aa12.37□□□□□ -0.43
SAMM50-201ENST00000350028 RNASE1P07998 156 aaKnown RBP12.37□□□□□ -0.43
SAMM50-201ENST00000350028 HLA-DRB4P13762 266 aa12.37□□□□□ -0.43
SAMM50-201ENST00000350028 DEFB114Q30KQ6 69 aa12.37□□□□□ -0.43
SAMM50-201ENST00000350028 TMEM61Q8N0U2 210 aa12.37□□□□□ -0.43
SAMM50-201ENST00000350028 SYT8Q8NBV8 401 aa12.37□□□□□ -0.43
SAMM50-201ENST00000350028 C18orf15Q96N68 181 aa12.37□□□□□ -0.43
SAMM50-201ENST00000350028 C16orf95Q9H693 158 aa12.37□□□□□ -0.43
SAMM50-201ENST00000350028 HLA-DRB4X5D2U9 266 aa12.37□□□□□ -0.43
SAMM50-201ENST00000350028 KNCNA6PVL3 124 aa12.36□□□□□ -0.43
SAMM50-201ENST00000350028 TCAPO15273 167 aa12.36□□□□□ -0.43
SAMM50-201ENST00000350028 LINC00315P59091 139 aa12.36□□□□□ -0.43
SAMM50-201ENST00000350028 BATFQ16520 125 aa12.36□□□□□ -0.43
SAMM50-201ENST00000350028 ORMDL2Q53FV1 153 aa12.36□□□□□ -0.43
SAMM50-201ENST00000350028 MUC4Q99102 2169 aa12.35□□□□□ -0.43
SAMM50-201ENST00000350028 TRGV11A0A075B6L2 103 aa12.35□□□□□ -0.43
SAMM50-201ENST00000350028 H3BMM0 161 aa12.35□□□□□ -0.43
SAMM50-201ENST00000350028 COL5A1-AS1Q5SY13 56 aa12.35□□□□□ -0.43
SAMM50-201ENST00000350028 Q8N1Y9 231 aa12.35□□□□□ -0.43
SAMM50-201ENST00000350028 RPL39LQ96EH5 51 aaKnown RBP12.35□□□□□ -0.43
SAMM50-201ENST00000350028 RAX2Q96IS3 184 aa12.35□□□□□ -0.43
SAMM50-201ENST00000350028 TRAV25A0A0B4J276 109 aa12.34□□□□□ -0.43
SAMM50-201ENST00000350028 PRSS1P07477 247 aa12.34□□□□□ -0.43
SAMM50-201ENST00000350028 COX8AP10176 69 aa12.34□□□□□ -0.43
SAMM50-201ENST00000350028 RPL32P62910 135 aaKnown RBP12.34□□□□□ -0.43
SAMM50-201ENST00000350028 FHL3Q13643 280 aa12.34□□□□□ -0.43
SAMM50-201ENST00000350028 TMEM160Q9NX00 188 aa12.34□□□□□ -0.43
SAMM50-201ENST00000350028 MDFICQ9P1T7 246 aa12.34□□□□□ -0.43
SAMM50-201ENST00000350028 NUDT3O95989 172 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms