RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 Q1RN00 199 aa13.6□□□□□ -0.23
APP-202ENST00000348990 Q8N9W7 124 aa13.6□□□□□ -0.23
APP-202ENST00000348990 A8MWV9 139 aa13.59□□□□□ -0.23
APP-202ENST00000348990 ANXA2RQ3ZCQ2 193 aa13.59□□□□□ -0.23
APP-202ENST00000348990 IGHV3-64A0A075B6Q5 118 aa13.59□□□□□ -0.23
APP-202ENST00000348990 F6UB75 175 aa13.59□□□□□ -0.23
APP-202ENST00000348990 TP53TG1Q9Y2A0 90 aa13.59□□□□□ -0.23
APP-202ENST00000348990 DCHS2Q6V1P9 2916 aa13.58□□□□□ -0.23
APP-202ENST00000348990 M0R1W7 72 aa13.58□□□□□ -0.24
APP-202ENST00000348990 XGP55808 180 aa13.58□□□□□ -0.24
APP-202ENST00000348990 FAM74A4Q5TZK3 123 aa13.58□□□□□ -0.24
APP-202ENST00000348990 FAM110DQ8TAY7 271 aaPredicted RBP13.58□□□□□ -0.24
APP-202ENST00000348990 CCDC140Q96MF4 163 aa13.58□□□□□ -0.24
APP-202ENST00000348990 IGHV3OR16-10A0A075B7F0 116 aa13.58□□□□□ -0.24
APP-202ENST00000348990 TRAV21A0A0B4J279 112 aa13.58□□□□□ -0.24
APP-202ENST00000348990 C11orf86A6NJI1 115 aa13.58□□□□□ -0.24
APP-202ENST00000348990 TMEM219Q86XT9 240 aa13.58□□□□□ -0.24
APP-202ENST00000348990 BEX4Q9NWD9 120 aaPredicted RBP13.58□□□□□ -0.24
APP-202ENST00000348990 CLPSL1A2RUU4 121 aa13.57□□□□□ -0.24
APP-202ENST00000348990 PPDPFLQ8WWR9 84 aa13.57□□□□□ -0.24
APP-202ENST00000348990 KIR2DL4Q99706 377 aa13.57□□□□□ -0.24
APP-202ENST00000348990 RELNP78509 3460 aa13.57□□□□□ -0.24
APP-202ENST00000348990 TCTEX1D4Q5JR98 221 aa13.57□□□□□ -0.24
APP-202ENST00000348990 Q6ZUT4 128 aa13.57□□□□□ -0.24
APP-202ENST00000348990 ODF3BA8MYP8 253 aa13.57□□□□□ -0.24
APP-202ENST00000348990 TCL1BO95988 128 aa13.57□□□□□ -0.24
APP-202ENST00000348990 SRD5A1P18405 259 aa13.57□□□□□ -0.24
APP-202ENST00000348990 RPL39P62891 51 aaKnown RBP13.57□□□□□ -0.24
APP-202ENST00000348990 CDIP1Q9H305 208 aa13.57□□□□□ -0.24
APP-202ENST00000348990 PTPRQQ9UMZ3 2332 aa13.57□□□□□ -0.24
APP-202ENST00000348990 SPG11Q96JI7 2443 aa13.56□□□□□ -0.24
APP-202ENST00000348990 A0A087WWL8 130 aa13.56□□□□□ -0.24
APP-202ENST00000348990 ZNF256Q9Y2P7 627 aaPredicted RBP13.56□□□□□ -0.24
APP-202ENST00000348990 Q8NA96 180 aa13.56□□□□□ -0.24
APP-202ENST00000348990 C9orf47Q6ZRZ4 202 aa13.55□□□□□ -0.24
APP-202ENST00000348990 ANAPC13Q9BS18 74 aa13.55□□□□□ -0.24
APP-202ENST00000348990 C20orf173Q96LM9 149 aa13.55□□□□□ -0.24
APP-202ENST00000348990 IGHV3-11P01762 117 aa13.55□□□□□ -0.24
APP-202ENST00000348990 PSMG3-AS1Q96PY0 264 aa13.55□□□□□ -0.24
APP-202ENST00000348990 LGALS3P17931 250 aaKnown RBP13.54□□□□□ -0.24
APP-202ENST00000348990 TEN1Q86WV5 123 aa13.54□□□□□ -0.24
APP-202ENST00000348990 NDUFA11Q86Y39 141 aa13.54□□□□□ -0.24
APP-202ENST00000348990 JPT2Q9H910 190 aa13.54□□□□□ -0.24
APP-202ENST00000348990 C9JAW5 83 aa13.54□□□□□ -0.24
APP-202ENST00000348990 ZFP36P26651 326 aaKnown RBP13.54□□□□□ -0.24
APP-202ENST00000348990 Q6ZS46 218 aa13.54□□□□□ -0.24
APP-202ENST00000348990 RNF183Q96D59 192 aa13.54□□□□□ -0.24
APP-202ENST00000348990 CCL21O00585 134 aa13.54□□□□□ -0.24
APP-202ENST00000348990 TRAV2A0A0B4J234 112 aa13.53□□□□□ -0.24
APP-202ENST00000348990 FHL3Q13643 280 aa13.52□□□□□ -0.24
APP-202ENST00000348990 ANKRD29Q8N6D5 301 aa13.52□□□□□ -0.24
APP-202ENST00000348990 SAA4P35542 130 aa13.52□□□□□ -0.25
APP-202ENST00000348990 Q8N6K4 173 aa13.52□□□□□ -0.25
APP-202ENST00000348990 CARD19Q96LW7 228 aa13.52□□□□□ -0.25
APP-202ENST00000348990 MAP1AP78559 2803 aaPredicted RBP13.51□□□□□ -0.25
APP-202ENST00000348990 A0A0J9YY99 117 aa13.51□□□□□ -0.25
APP-202ENST00000348990 UBE2D1P51668 147 aa13.51□□□□□ -0.25
APP-202ENST00000348990 MINOS1Q5TGZ0 78 aa13.51□□□□□ -0.25
APP-202ENST00000348990 C9orf139Q6ZV77 190 aa13.51□□□□□ -0.25
APP-202ENST00000348990 TEX29Q8N6K0 151 aa13.51□□□□□ -0.25
APP-202ENST00000348990 LINC00477Q96M19 166 aa13.51□□□□□ -0.25
APP-202ENST00000348990 MINOS1-NBL1R4GNA1 71 aa13.51□□□□□ -0.25
APP-202ENST00000348990 ATP6V0E2Q8NHE4 81 aa13.51□□□□□ -0.25
APP-202ENST00000348990 UBTD1Q9HAC8 227 aa13.51□□□□□ -0.25
APP-202ENST00000348990 IGHV4-4A0A075B6R2 117 aa13.51□□□□□ -0.25
APP-202ENST00000348990 IGKV3-20P01619 116 aa13.51□□□□□ -0.25
APP-202ENST00000348990 ZNF688P0C7X2 276 aa13.51□□□□□ -0.25
APP-202ENST00000348990 PRO1854Q9UHT4 67 aa13.51□□□□□ -0.25
APP-202ENST00000348990 IGHV4-39P01824 125 aa13.5□□□□□ -0.25
APP-202ENST00000348990 CFC1BP0CG36 223 aa13.5□□□□□ -0.25
APP-202ENST00000348990 CFC1P0CG37 223 aa13.5□□□□□ -0.25
APP-202ENST00000348990 PMVKQ15126 192 aa13.5□□□□□ -0.25
APP-202ENST00000348990 ZFAND6Q6FIF0 208 aa13.5□□□□□ -0.25
APP-202ENST00000348990 DOPEY2Q9Y3R5 2298 aa13.5□□□□□ -0.25
APP-202ENST00000348990 TRPT1Q86TN4 253 aaKnown RBP13.5□□□□□ -0.25
APP-202ENST00000348990 NOTCH3Q9UM47 2321 aa13.5□□□□□ -0.25
APP-202ENST00000348990 IGF2RP11717 2491 aa13.49□□□□□ -0.25
APP-202ENST00000348990 TRBV7-1A0A0A6YYK4 115 aa13.49□□□□□ -0.25
APP-202ENST00000348990 PRSS2P07478 247 aa13.49□□□□□ -0.25
APP-202ENST00000348990 UNQ9165/PRO28630Q6UXU0 137 aa13.49□□□□□ -0.25
APP-202ENST00000348990 ZFAND2AQ8N6M9 145 aa13.49□□□□□ -0.25
APP-202ENST00000348990 OOSP1A8MZH6 123 aa13.49□□□□□ -0.25
APP-202ENST00000348990 LINC01619G3V211 115 aa13.49□□□□□ -0.25
APP-202ENST00000348990 CD7P09564 240 aa13.49□□□□□ -0.25
APP-202ENST00000348990 GATA3P23771 443 aa13.49□□□□□ -0.25
APP-202ENST00000348990 FAM159AQ6UWV7 190 aa13.49□□□□□ -0.25
APP-202ENST00000348990 OPRPNQ99935 248 aaPredicted RBP13.49□□□□□ -0.25
APP-202ENST00000348990 SS18L2Q9UHA2 77 aa13.49□□□□□ -0.25
APP-202ENST00000348990 TRBV20-1A0A075B6N2 111 aa13.49□□□□□ -0.25
APP-202ENST00000348990 C10orf126Q8N4M7 172 aa13.49□□□□□ -0.25
APP-202ENST00000348990 SLC25A20O43772 301 aa13.48□□□□□ -0.25
APP-202ENST00000348990 TRBV12-3P01733 135 aa13.48□□□□□ -0.25
APP-202ENST00000348990 PAPPA-AS1Q5QFB9 102 aa13.48□□□□□ -0.25
APP-202ENST00000348990 MRPL53Q96EL3 112 aaKnown RBP13.48□□□□□ -0.25
APP-202ENST00000348990 PPP1R17O96001 155 aa13.48□□□□□ -0.25
APP-202ENST00000348990 ZNF292O60281 2723 aa13.48□□□□□ -0.25
APP-202ENST00000348990 A4D1N5 150 aa13.48□□□□□ -0.25
APP-202ENST00000348990 J3QQQ9 107 aa13.48□□□□□ -0.25
APP-202ENST00000348990 CSPG4Q6UVK1 2322 aa13.47□□□□□ -0.25
APP-202ENST00000348990 SDHAF1A6NFY7 115 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms