RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 OR10AG1Q8NH19 301 aa11.02□□□□□ -0.65
CXCL12-201ENST00000343575 SGK494Q96LW2 274 aa11.02□□□□□ -0.65
CXCL12-201ENST00000343575 SLC50A1Q9BRV3 221 aa11.02□□□□□ -0.65
CXCL12-201ENST00000343575 AAMDCQ9H7C9 122 aa11.02□□□□□ -0.65
CXCL12-201ENST00000343575 AP5S1Q9NUS5 200 aa11.02□□□□□ -0.65
CXCL12-201ENST00000343575 RPH3ALQ9UNE2 315 aa11.02□□□□□ -0.65
CXCL12-201ENST00000343575 TRAV8-1A0A0A6YYK1 113 aa11.01□□□□□ -0.65
CXCL12-201ENST00000343575 A0A1B0GUT8 65 aa11.01□□□□□ -0.65
CXCL12-201ENST00000343575 C7orf71A4D174 169 aa11.01□□□□□ -0.65
CXCL12-201ENST00000343575 GAGE10A6NGK3 116 aa11.01□□□□□ -0.65
CXCL12-201ENST00000343575 BMI1P35226 326 aa11.01□□□□□ -0.65
CXCL12-201ENST00000343575 DEFB114Q30KQ6 69 aa11.01□□□□□ -0.65
CXCL12-201ENST00000343575 VWFP04275 2813 aa11.01□□□□□ -0.65
CXCL12-201ENST00000343575 LINC00173Q6ZV60 143 aa11□□□□□ -0.65
CXCL12-201ENST00000343575 GOLT1AQ6ZVE7 132 aa11□□□□□ -0.65
CXCL12-201ENST00000343575 TMEM61Q8N0U2 210 aa11□□□□□ -0.65
CXCL12-201ENST00000343575 LINC00482Q8N8I6 264 aa11□□□□□ -0.65
CXCL12-201ENST00000343575 C16orf92Q96LL3 132 aa11□□□□□ -0.65
CXCL12-201ENST00000343575 SIGLEC8Q9NYZ4 499 aa11□□□□□ -0.65
CXCL12-201ENST00000343575 FA2HQ7L5A8 372 aa11□□□□□ -0.65
CXCL12-201ENST00000343575 Q86TA4 180 aa11□□□□□ -0.65
CXCL12-201ENST00000343575 ZNF747Q9BV97 191 aa11□□□□□ -0.65
CXCL12-201ENST00000343575 IGKV2-40A0A087WW87 121 aaPredicted RBP10.99□□□□□ -0.65
CXCL12-201ENST00000343575 C9orf118A6NHY6 69 aa10.99□□□□□ -0.65
CXCL12-201ENST00000343575 K7EQG2 157 aa10.99□□□□□ -0.65
CXCL12-201ENST00000343575 IGKV2D-40P01614 121 aaPredicted RBP10.99□□□□□ -0.65
CXCL12-201ENST00000343575 DEFB1P60022 68 aa10.99□□□□□ -0.65
CXCL12-201ENST00000343575 PSG3Q16557 428 aa10.99□□□□□ -0.65
CXCL12-201ENST00000343575 CD300EQ496F6 205 aaPredicted RBP10.99□□□□□ -0.65
CXCL12-201ENST00000343575 TRAV8-6A0A0B4J262 113 aa10.98□□□□□ -0.65
CXCL12-201ENST00000343575 UFSP1Q6NVU6 142 aa10.98□□□□□ -0.65
CXCL12-201ENST00000343575 LINC00322Q6ZN03 302 aaPredicted RBP10.98□□□□□ -0.65
CXCL12-201ENST00000343575 C2orf91Q6ZV80 131 aa10.98□□□□□ -0.65
CXCL12-201ENST00000343575 WFDC3Q8IUB2 231 aa10.98□□□□□ -0.65
CXCL12-201ENST00000343575 VGLL1Q99990 258 aa10.98□□□□□ -0.65
CXCL12-201ENST00000343575 HSD52Q0P140 79 aa10.98□□□□□ -0.65
CXCL12-201ENST00000343575 LGALS9BQ3B8N2 356 aa10.98□□□□□ -0.65
CXCL12-201ENST00000343575 LGALS9CQ6DKI2 356 aa10.98□□□□□ -0.65
CXCL12-201ENST00000343575 OR5A1Q8NGJ0 315 aa10.98□□□□□ -0.65
CXCL12-201ENST00000343575 ASCL2Q99929 193 aa10.98□□□□□ -0.65
CXCL12-201ENST00000343575 TRRAPQ9Y4A5 3859 aa10.97□□□□□ -0.65
CXCL12-201ENST00000343575 STAB1Q9NY15 2570 aa10.97□□□□□ -0.65
CXCL12-201ENST00000343575 K7EQM0 130 aa10.97□□□□□ -0.65
CXCL12-201ENST00000343575 MRPL53Q96EL3 112 aaKnown RBP10.97□□□□□ -0.65
CXCL12-201ENST00000343575 COL6A5A8TX70 2615 aa10.96□□□□□ -0.65
CXCL12-201ENST00000343575 PF4P02776 101 aa10.96□□□□□ -0.65
CXCL12-201ENST00000343575 TMEM75Q8N9X5 138 aa10.96□□□□□ -0.65
CXCL12-201ENST00000343575 FER1L6-AS1Q8NA97 138 aa10.96□□□□□ -0.65
CXCL12-201ENST00000343575 PRSS3P2Q8NHM4 247 aa10.96□□□□□ -0.65
CXCL12-201ENST00000343575 NOTCH3Q9UM47 2321 aa10.96□□□□□ -0.66
CXCL12-201ENST00000343575 K7EP34 96 aa10.95□□□□□ -0.66
CXCL12-201ENST00000343575 SMIM17P0DL12 118 aa10.95□□□□□ -0.66
CXCL12-201ENST00000343575 ERCC8Q13216 396 aa10.95□□□□□ -0.66
CXCL12-201ENST00000343575 ZNF493Q6ZR52 646 aa10.95□□□□□ -0.66
CXCL12-201ENST00000343575 BOD1L2Q8IYS8 172 aa10.95□□□□□ -0.66
CXCL12-201ENST00000343575 DYNLRB2Q8TF09 96 aa10.95□□□□□ -0.66
CXCL12-201ENST00000343575 ZNF256Q9Y2P7 627 aaPredicted RBP10.95□□□□□ -0.66
CXCL12-201ENST00000343575 F6UB75 175 aa10.95□□□□□ -0.66
CXCL12-201ENST00000343575 G3V4G9 280 aa10.95□□□□□ -0.66
CXCL12-201ENST00000343575 CT45A10P0DMU9 189 aa10.95□□□□□ -0.66
CXCL12-201ENST00000343575 PSG8Q9UQ74 426 aa10.95□□□□□ -0.66
CXCL12-201ENST00000343575 SERTM2A0A1B0GWG4 89 aa10.94□□□□□ -0.66
CXCL12-201ENST00000343575 SAP30O75446 220 aa10.94□□□□□ -0.66
CXCL12-201ENST00000343575 IGLV1-51P01701 117 aa10.94□□□□□ -0.66
CXCL12-201ENST00000343575 ZNF688P0C7X2 276 aa10.94□□□□□ -0.66
CXCL12-201ENST00000343575 FGF6P10767 208 aa10.94□□□□□ -0.66
CXCL12-201ENST00000343575 PRNTQ86SH4 94 aa10.94□□□□□ -0.66
CXCL12-201ENST00000343575 AGPAT4-IT1Q9H0P7 198 aa10.94□□□□□ -0.66
CXCL12-201ENST00000343575 RBAKDNA6NC62 111 aa10.93□□□□□ -0.66
CXCL12-201ENST00000343575 ERASQ7Z444 233 aa10.93□□□□□ -0.66
CXCL12-201ENST00000343575 Q8TAT8 98 aa10.93□□□□□ -0.66
CXCL12-201ENST00000343575 TMEM158Q8WZ71 300 aa10.93□□□□□ -0.66
CXCL12-201ENST00000343575 U3KQK5 164 aa10.93□□□□□ -0.66
CXCL12-201ENST00000343575 TRAV2A0A0B4J234 112 aa10.93□□□□□ -0.66
CXCL12-201ENST00000343575 LINC01559Q495D7 138 aa10.93□□□□□ -0.66
CXCL12-201ENST00000343575 OR2K2Q8NGT1 345 aa10.93□□□□□ -0.66
CXCL12-201ENST00000343575 CHTOPQ9Y3Y2 248 aaKnown RBP10.93□□□□□ -0.66
CXCL12-201ENST00000343575 AGRNO00468 2067 aa10.93□□□□□ -0.66
CXCL12-201ENST00000343575 TRAV25A0A0B4J276 109 aa10.92□□□□□ -0.66
CXCL12-201ENST00000343575 ID1P41134 155 aa10.92□□□□□ -0.66
CXCL12-201ENST00000343575 SAMD13Q5VXD3 122 aa10.92□□□□□ -0.66
CXCL12-201ENST00000343575 C9orf47Q6ZRZ4 202 aa10.92□□□□□ -0.66
CXCL12-201ENST00000343575 C8orf49Q96NF6 230 aa10.92□□□□□ -0.66
CXCL12-201ENST00000343575 SPAG8Q99932 426 aaPredicted RBP10.92□□□□□ -0.66
CXCL12-201ENST00000343575 TP73-AS1Q9UF72 201 aa10.92□□□□□ -0.66
CXCL12-201ENST00000343575 TMEM238C9JI98 176 aa10.91□□□□□ -0.66
CXCL12-201ENST00000343575 H0Y8G0 127 aa10.91□□□□□ -0.66
CXCL12-201ENST00000343575 CIDEAO60543 219 aa10.91□□□□□ -0.66
CXCL12-201ENST00000343575 NEGR1Q7Z3B1 354 aa10.91□□□□□ -0.66
CXCL12-201ENST00000343575 C3orf56Q8N813 242 aa10.91□□□□□ -0.66
CXCL12-201ENST00000343575 OR8A1Q8NGG7 326 aa10.91□□□□□ -0.66
CXCL12-201ENST00000343575 PRR25Q96S07 402 aa10.91□□□□□ -0.66
CXCL12-201ENST00000343575 ZNF138P52744 262 aa10.91□□□□□ -0.66
CXCL12-201ENST00000343575 WFDC9Q8NEX5 89 aa10.91□□□□□ -0.66
CXCL12-201ENST00000343575 FBLL1A6NHQ2 334 aaKnown RBP10.9□□□□□ -0.66
CXCL12-201ENST00000343575 ARMS2P0C7Q2 107 aa10.9□□□□□ -0.66
CXCL12-201ENST00000343575 CRIP1P50238 77 aa10.9□□□□□ -0.66
CXCL12-201ENST00000343575 SNRPD3P62318 126 aaKnown RBP10.9□□□□□ -0.66
CXCL12-201ENST00000343575 KIR3DS1Q14943 382 aa10.9□□□□□ -0.66
CXCL12-201ENST00000343575 COX8CQ7Z4L0 72 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms