RNA–Protein interactions for RNA: ENST00000340621.9

CCDC144A-202, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2 BASIC

Gene CCDC144A, Length 2,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-202ENST00000340621 STPG4Q8N801 248 aa11.87□□□□□ -0.51
CCDC144A-202ENST00000340621 MRAP2Q96G30 205 aa11.87□□□□□ -0.51
CCDC144A-202ENST00000340621 TCAPO15273 167 aa11.86□□□□□ -0.51
CCDC144A-202ENST00000340621 TMEM158Q8WZ71 300 aa11.86□□□□□ -0.51
CCDC144A-202ENST00000340621 TRAV12-2A0A075B6T6 113 aa11.86□□□□□ -0.51
CCDC144A-202ENST00000340621 CD5LO43866 347 aa11.86□□□□□ -0.51
CCDC144A-202ENST00000340621 HINT1P49773 126 aaPredicted RBP11.86□□□□□ -0.51
CCDC144A-202ENST00000340621 HIST2H2BDQ6DRA6 164 aa11.86□□□□□ -0.51
CCDC144A-202ENST00000340621 SLC25A34Q6PIV7 304 aa11.86□□□□□ -0.51
CCDC144A-202ENST00000340621 DPH3P1Q9H4G8 78 aa11.86□□□□□ -0.51
CCDC144A-202ENST00000340621 COL5A1-AS1Q5SY13 56 aa11.85□□□□□ -0.51
CCDC144A-202ENST00000340621 DUX3Q96PT4 197 aa11.85□□□□□ -0.51
CCDC144A-202ENST00000340621 MYO9AB2RTY4 2548 aa11.85□□□□□ -0.51
CCDC144A-202ENST00000340621 C7orf71A4D174 169 aa11.84□□□□□ -0.51
CCDC144A-202ENST00000340621 OR11H1Q8NG94 326 aa11.84□□□□□ -0.51
CCDC144A-202ENST00000340621 RASL10AQ92737 203 aa11.84□□□□□ -0.51
CCDC144A-202ENST00000340621 CCDC168Q8NDH2 2452 aa11.84□□□□□ -0.51
CCDC144A-202ENST00000340621 ODF3Q96PU9 254 aa11.84□□□□□ -0.51
CCDC144A-202ENST00000340621 DKK2Q9UBU2 259 aa11.84□□□□□ -0.51
CCDC144A-202ENST00000340621 PDZD2O15018 2839 aa11.83□□□□□ -0.51
CCDC144A-202ENST00000340621 CD7P09564 240 aa11.83□□□□□ -0.52
CCDC144A-202ENST00000340621 LAGE3Q14657 143 aa11.83□□□□□ -0.52
CCDC144A-202ENST00000340621 AKAP9Q99996 3911 aa11.83□□□□□ -0.52
CCDC144A-202ENST00000340621 LINC01619G3V211 115 aa11.83□□□□□ -0.52
CCDC144A-202ENST00000340621 NXPH4O95158 308 aa11.83□□□□□ -0.52
CCDC144A-202ENST00000340621 SMIM17P0DL12 118 aa11.83□□□□□ -0.52
CCDC144A-202ENST00000340621 ANKRD39Q53RE8 183 aa11.83□□□□□ -0.52
CCDC144A-202ENST00000340621 DPF1Q92782 380 aa11.83□□□□□ -0.52
CCDC144A-202ENST00000340621 RPL39LQ96EH5 51 aaKnown RBP11.83□□□□□ -0.52
CCDC144A-202ENST00000340621 CUBNO60494 3623 aa11.82□□□□□ -0.52
CCDC144A-202ENST00000340621 MGPP08493 103 aa11.82□□□□□ -0.52
CCDC144A-202ENST00000340621 PLA2G2AP14555 144 aa11.82□□□□□ -0.52
CCDC144A-202ENST00000340621 SPINK13Q1W4C9 94 aa11.82□□□□□ -0.52
CCDC144A-202ENST00000340621 KHDC1LQ5JSQ8 128 aa11.82□□□□□ -0.52
CCDC144A-202ENST00000340621 Q6ZSV7 163 aa11.82□□□□□ -0.52
CCDC144A-202ENST00000340621 TMEM86BQ8N661 226 aa11.82□□□□□ -0.52
CCDC144A-202ENST00000340621 SONP18583 2426 aaKnown RBP11.82□□□□□ -0.52
CCDC144A-202ENST00000340621 NF1P21359 2839 aa11.82□□□□□ -0.52
CCDC144A-202ENST00000340621 OR1N2Q8NGR9 330 aa11.82□□□□□ -0.52
CCDC144A-202ENST00000340621 C4orf3Q8WVX3 66 aa11.82□□□□□ -0.52
CCDC144A-202ENST00000340621 AP1S3Q96PC3 154 aa11.82□□□□□ -0.52
CCDC144A-202ENST00000340621 SMIM2Q9BVW6 85 aa11.82□□□□□ -0.52
CCDC144A-202ENST00000340621 JPT2Q9H910 190 aa11.82□□□□□ -0.52
CCDC144A-202ENST00000340621 KIF25-AS1Q9Y6Z4 181 aa11.82□□□□□ -0.52
CCDC144A-202ENST00000340621 PRSS1P07477 247 aa11.81□□□□□ -0.52
CCDC144A-202ENST00000340621 COX8AP10176 69 aa11.81□□□□□ -0.52
CCDC144A-202ENST00000340621 CDKN1BP46527 198 aa11.81□□□□□ -0.52
CCDC144A-202ENST00000340621 LINC00315P59091 139 aa11.81□□□□□ -0.52
CCDC144A-202ENST00000340621 FLNAP21333 2647 aaKnown RBP11.81□□□□□ -0.52
CCDC144A-202ENST00000340621 DNAJC9-AS1A6NH13 148 aa11.8□□□□□ -0.52
CCDC144A-202ENST00000340621 G0S2P27469 103 aa11.8□□□□□ -0.52
CCDC144A-202ENST00000340621 TCTAP57738 103 aa11.8□□□□□ -0.52
CCDC144A-202ENST00000340621 SUMO2P61956 95 aaKnown RBP11.8□□□□□ -0.52
CCDC144A-202ENST00000340621 MDFICQ9P1T7 246 aa11.8□□□□□ -0.52
CCDC144A-202ENST00000340621 DUSP14O95147 198 aaKnown RBP11.8□□□□□ -0.52
CCDC144A-202ENST00000340621 ZNF25P17030 456 aaPredicted RBP11.8□□□□□ -0.52
CCDC144A-202ENST00000340621 FOXI2Q6ZQN5 318 aa11.8□□□□□ -0.52
CCDC144A-202ENST00000340621 OR9G4Q8NGQ1 327 aa11.8□□□□□ -0.52
CCDC144A-202ENST00000340621 DLX4Q92988 240 aaPredicted RBP11.8□□□□□ -0.52
CCDC144A-202ENST00000340621 C20orf78Q9BR46 151 aa11.8□□□□□ -0.52
CCDC144A-202ENST00000340621 IGHV3-16A0A0C4DH30 117 aa11.79□□□□□ -0.52
CCDC144A-202ENST00000340621 J3QKU1 62 aa11.79□□□□□ -0.52
CCDC144A-202ENST00000340621 ODF1Q14990 250 aa11.79□□□□□ -0.52
CCDC144A-202ENST00000340621 MPV17L2Q567V2 206 aa11.79□□□□□ -0.52
CCDC144A-202ENST00000340621 AMTNQ6UX39 209 aa11.79□□□□□ -0.52
CCDC144A-202ENST00000340621 POM121L12Q8N7R1 296 aa11.79□□□□□ -0.52
CCDC144A-202ENST00000340621 KNCNA6PVL3 124 aa11.79□□□□□ -0.52
CCDC144A-202ENST00000340621 Q8N1Y9 231 aa11.79□□□□□ -0.52
CCDC144A-202ENST00000340621 TEX29Q8N6K0 151 aa11.79□□□□□ -0.52
CCDC144A-202ENST00000340621 KLHL30-AS1Q8NEE0 82 aa11.79□□□□□ -0.52
CCDC144A-202ENST00000340621 ESM1Q9NQ30 184 aa11.79□□□□□ -0.52
CCDC144A-202ENST00000340621 MUC4Q99102 2169 aa11.78□□□□□ -0.52
CCDC144A-202ENST00000340621 SORL1Q92673 2214 aa11.78□□□□□ -0.52
CCDC144A-202ENST00000340621 NUDT3O95989 172 aa11.78□□□□□ -0.52
CCDC144A-202ENST00000340621 ZMAT4Q9H898 229 aa11.78□□□□□ -0.52
CCDC144A-202ENST00000340621 ITPR2Q14571 2701 aa11.78□□□□□ -0.52
CCDC144A-202ENST00000340621 A0A087WWL8 130 aa11.78□□□□□ -0.52
CCDC144A-202ENST00000340621 DEFB131AP59861 70 aa11.78□□□□□ -0.52
CCDC144A-202ENST00000340621 FOXC2Q99958 501 aa11.78□□□□□ -0.52
CCDC144A-202ENST00000340621 PEMTQ9UBM1 199 aa11.78□□□□□ -0.52
CCDC144A-202ENST00000340621 KMT2BQ9UMN6 2715 aaPredicted RBP11.77□□□□□ -0.52
CCDC144A-202ENST00000340621 IGHV1OR15-1A0A075B7D0 117 aa11.77□□□□□ -0.53
CCDC144A-202ENST00000340621 ATP5LO75964 103 aa11.77□□□□□ -0.53
CCDC144A-202ENST00000340621 FGF6P10767 208 aa11.77□□□□□ -0.53
CCDC144A-202ENST00000340621 KRTAP1-1Q07627 177 aa11.77□□□□□ -0.53
CCDC144A-202ENST00000340621 TMEM61Q8N0U2 210 aa11.77□□□□□ -0.53
CCDC144A-202ENST00000340621 C9orf85Q96MD7 179 aa11.77□□□□□ -0.53
CCDC144A-202ENST00000340621 TMEM208Q9BTX3 173 aa11.77□□□□□ -0.53
CCDC144A-202ENST00000340621 HELZ2Q9BYK8 2649 aaKnown RBP11.77□□□□□ -0.53
CCDC144A-202ENST00000340621 ZNF124Q15973 351 aa11.76□□□□□ -0.53
CCDC144A-202ENST00000340621 HHLA3Q9XRX5 114 aa11.76□□□□□ -0.53
CCDC144A-202ENST00000340621 AGRNO00468 2067 aa11.76□□□□□ -0.53
CCDC144A-202ENST00000340621 C2orf91Q6ZV80 131 aa11.76□□□□□ -0.53
CCDC144A-202ENST00000340621 ORMDL2Q53FV1 153 aa11.75□□□□□ -0.53
CCDC144A-202ENST00000340621 C11orf44Q8N8P7 122 aa11.75□□□□□ -0.53
CCDC144A-202ENST00000340621 CSTL1Q9H114 145 aa11.75□□□□□ -0.53
CCDC144A-202ENST00000340621 GAGE1Q13065 139 aa11.75□□□□□ -0.53
CCDC144A-202ENST00000340621 Q6ZVH6 145 aa11.75□□□□□ -0.53
CCDC144A-202ENST00000340621 PPP1R17O96001 155 aa11.74□□□□□ -0.53
CCDC144A-202ENST00000340621 RBMY1A1P0DJD3 496 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms