RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 KLHL30-AS1Q8NEE0 82 aa11.79□□□□□ -0.52
LIMK2-203ENST00000340552 TIMD4Q96H15 378 aa11.79□□□□□ -0.52
LIMK2-203ENST00000340552 ODF3Q96PU9 254 aa11.79□□□□□ -0.52
LIMK2-203ENST00000340552 KLK15Q9H2R5 256 aa11.79□□□□□ -0.52
LIMK2-203ENST00000340552 ONECUT1Q9UBC0 465 aa11.79□□□□□ -0.52
LIMK2-203ENST00000340552 C19orf84I3L1E1 186 aa11.78□□□□□ -0.52
LIMK2-203ENST00000340552 C3orf56Q8N813 242 aa11.78□□□□□ -0.52
LIMK2-203ENST00000340552 RNF125Q96EQ8 232 aa11.78□□□□□ -0.52
LIMK2-203ENST00000340552 TEX22C9J3V5 150 aa11.78□□□□□ -0.52
LIMK2-203ENST00000340552 TRPT1Q86TN4 253 aaKnown RBP11.78□□□□□ -0.52
LIMK2-203ENST00000340552 DLX1P56177 255 aa11.77□□□□□ -0.53
LIMK2-203ENST00000340552 ARHGAP32A7KAX9 2087 aa11.77□□□□□ -0.53
LIMK2-203ENST00000340552 Q8N1Y9 231 aa11.77□□□□□ -0.53
LIMK2-203ENST00000340552 C10orf126Q8N4M7 172 aa11.77□□□□□ -0.53
LIMK2-203ENST00000340552 NEXN-AS1Q8NBZ9 246 aa11.77□□□□□ -0.53
LIMK2-203ENST00000340552 IGSF10Q6WRI0 2623 aa11.76□□□□□ -0.53
LIMK2-203ENST00000340552 PDE6HQ13956 83 aa11.76□□□□□ -0.53
LIMK2-203ENST00000340552 C15orf53Q8NAA6 179 aa11.76□□□□□ -0.53
LIMK2-203ENST00000340552 NTN5Q8WTR8 489 aaPredicted RBP11.76□□□□□ -0.53
LIMK2-203ENST00000340552 UBTD1Q9HAC8 227 aa11.76□□□□□ -0.53
LIMK2-203ENST00000340552 CFAP46Q8IYW2 2715 aa11.76□□□□□ -0.53
LIMK2-203ENST00000340552 AKAP6Q13023 2319 aa11.76□□□□□ -0.53
LIMK2-203ENST00000340552 SPTAN1Q13813 2472 aaKnown RBP11.76□□□□□ -0.53
LIMK2-203ENST00000340552 PRB3Q04118 309 aaPredicted RBP11.76□□□□□ -0.53
LIMK2-203ENST00000340552 IGFL4Q6B9Z1 124 aa11.76□□□□□ -0.53
LIMK2-203ENST00000340552 MDFICQ9P1T7 246 aa11.76□□□□□ -0.53
LIMK2-203ENST00000340552 M0QXV9 152 aa11.75□□□□□ -0.53
LIMK2-203ENST00000340552 IGHG4P01861 327 aa11.75□□□□□ -0.53
LIMK2-203ENST00000340552 SCGB3A1Q96QR1 104 aa11.75□□□□□ -0.53
LIMK2-203ENST00000340552 A0A0J9YY99 117 aa11.74□□□□□ -0.53
LIMK2-203ENST00000340552 CRYGBP07316 175 aa11.74□□□□□ -0.53
LIMK2-203ENST00000340552 HLA-DMBP28068 263 aa11.74□□□□□ -0.53
LIMK2-203ENST00000340552 SRSF2Q01130 221 aaKnown RBP11.74□□□□□ -0.53
LIMK2-203ENST00000340552 OR10J6PQ8NGY7 276 aa11.74□□□□□ -0.53
LIMK2-203ENST00000340552 SIGLEC9Q9Y336 463 aa11.74□□□□□ -0.53
LIMK2-203ENST00000340552 Q6ZS46 218 aa11.74□□□□□ -0.53
LIMK2-203ENST00000340552 K7EIM0 57 aa11.73□□□□□ -0.53
LIMK2-203ENST00000340552 IGLV1-47P01700 117 aa11.73□□□□□ -0.53
LIMK2-203ENST00000340552 IL17RELQ6ZVW7 336 aa11.73□□□□□ -0.53
LIMK2-203ENST00000340552 PRO1854Q9UHT4 67 aa11.73□□□□□ -0.53
LIMK2-203ENST00000340552 S4R3C0 116 aa11.73□□□□□ -0.53
LIMK2-203ENST00000340552 TEX49A0A1B0GTD5 131 aa11.73□□□□□ -0.53
LIMK2-203ENST00000340552 IGHV3-30P01768 117 aa11.73□□□□□ -0.53
LIMK2-203ENST00000340552 IGHV3-30-5P0DP03 117 aa11.73□□□□□ -0.53
LIMK2-203ENST00000340552 COX7A1P24310 79 aa11.73□□□□□ -0.53
LIMK2-203ENST00000340552 LY6G5BQ8NDX9 201 aa11.73□□□□□ -0.53
LIMK2-203ENST00000340552 BAALCQ8WXS3 180 aa11.73□□□□□ -0.53
LIMK2-203ENST00000340552 TACC2O95359 2948 aa11.72□□□□□ -0.53
LIMK2-203ENST00000340552 TRAV8-4A0A0B4J246 113 aa11.72□□□□□ -0.53
LIMK2-203ENST00000340552 CFHR4Q92496 578 aa11.72□□□□□ -0.53
LIMK2-203ENST00000340552 SPANXA1Q9NS26 97 aa11.72□□□□□ -0.53
LIMK2-203ENST00000340552 ATP5J2P56134 94 aa11.72□□□□□ -0.53
LIMK2-203ENST00000340552 TOMM6Q96B49 74 aa11.72□□□□□ -0.53
LIMK2-203ENST00000340552 LINC01587Q99440 93 aa11.72□□□□□ -0.53
LIMK2-203ENST00000340552 USP24Q9UPU5 2620 aa11.71□□□□□ -0.53
LIMK2-203ENST00000340552 ERCC8Q13216 396 aa11.71□□□□□ -0.53
LIMK2-203ENST00000340552 CHCHD5Q9BSY4 110 aa11.71□□□□□ -0.53
LIMK2-203ENST00000340552 SMIM2Q9BVW6 85 aa11.71□□□□□ -0.53
LIMK2-203ENST00000340552 BUB1B-PAK6H3BSN5 160 aa11.71□□□□□ -0.54
LIMK2-203ENST00000340552 IGKV3D-20A0A0C4DH25 116 aa11.7□□□□□ -0.54
LIMK2-203ENST00000340552 C11orf21Q9P2W6 132 aa11.7□□□□□ -0.54
LIMK2-203ENST00000340552 MED13LQ71F56 2210 aa11.7□□□□□ -0.54
LIMK2-203ENST00000340552 EIF4EBP3O60516 100 aaPredicted RBP11.7□□□□□ -0.54
LIMK2-203ENST00000340552 ELANEP08246 267 aa11.7□□□□□ -0.54
LIMK2-203ENST00000340552 TMEM126AQ9H061 195 aa11.7□□□□□ -0.54
LIMK2-203ENST00000340552 WNK2Q9Y3S1 2297 aa11.7□□□□□ -0.54
LIMK2-203ENST00000340552 IGHV1-3A0A0C4DH29 117 aa11.68□□□□□ -0.54
LIMK2-203ENST00000340552 DYNAPQ8N1N2 210 aa11.68□□□□□ -0.54
LIMK2-203ENST00000340552 C21orf62Q9NYP8 219 aa11.68□□□□□ -0.54
LIMK2-203ENST00000340552 TRAV2A0A0B4J234 112 aa11.68□□□□□ -0.54
LIMK2-203ENST00000340552 COL12A1Q99715 3063 aa11.68□□□□□ -0.54
LIMK2-203ENST00000340552 H7C2G1 150 aa11.67□□□□□ -0.54
LIMK2-203ENST00000340552 J3KRW8 73 aa11.67□□□□□ -0.54
LIMK2-203ENST00000340552 TSPEAR-AS2P59090 65 aa11.67□□□□□ -0.54
LIMK2-203ENST00000340552 CSDC2Q9Y534 153 aaKnown RBP11.67□□□□□ -0.54
LIMK2-203ENST00000340552 IGHV7-4-1A0A0J9YVY3 117 aa11.67□□□□□ -0.54
LIMK2-203ENST00000340552 IGHV3-33P01772 117 aa11.67□□□□□ -0.54
LIMK2-203ENST00000340552 RPL13AP40429 203 aaKnown RBP11.67□□□□□ -0.54
LIMK2-203ENST00000340552 ORMDL2Q53FV1 153 aa11.67□□□□□ -0.54
LIMK2-203ENST00000340552 SLC25A29Q8N8R3 303 aa11.67□□□□□ -0.54
LIMK2-203ENST00000340552 NRGNQ92686 78 aa11.67□□□□□ -0.54
LIMK2-203ENST00000340552 SMAD5-AS1Q9Y6J3 95 aa11.67□□□□□ -0.54
LIMK2-203ENST00000340552 ZFYVE26Q68DK2 2539 aa11.67□□□□□ -0.54
LIMK2-203ENST00000340552 C11orf86A6NJI1 115 aa11.67□□□□□ -0.54
LIMK2-203ENST00000340552 PRAC2D3DTV9 90 aa11.67□□□□□ -0.54
LIMK2-203ENST00000340552 M0R1W7 72 aa11.67□□□□□ -0.54
LIMK2-203ENST00000340552 TIMM23O14925 209 aa11.67□□□□□ -0.54
LIMK2-203ENST00000340552 EMP1P54849 157 aa11.67□□□□□ -0.54
LIMK2-203ENST00000340552 LINC01620Q4KN68 170 aa11.67□□□□□ -0.54
LIMK2-203ENST00000340552 C2orf66Q6UXQ4 117 aa11.66□□□□□ -0.54
LIMK2-203ENST00000340552 DOPEY1Q5JWR5 2465 aa11.66□□□□□ -0.54
LIMK2-203ENST00000340552 LY6LH3BQJ8 138 aa11.66□□□□□ -0.54
LIMK2-203ENST00000340552 CRYGDP07320 174 aa11.66□□□□□ -0.54
LIMK2-203ENST00000340552 A4D1N5 150 aa11.65□□□□□ -0.54
LIMK2-203ENST00000340552 LGALS9O00182 355 aa11.65□□□□□ -0.54
LIMK2-203ENST00000340552 PRB1P04280 392 aa11.65□□□□□ -0.54
LIMK2-203ENST00000340552 LINC00694P0DN24 101 aa11.65□□□□□ -0.54
LIMK2-203ENST00000340552 RPL7P18124 248 aaKnown RBP11.65□□□□□ -0.54
LIMK2-203ENST00000340552 ZFP36P26651 326 aaKnown RBP11.65□□□□□ -0.54
LIMK2-203ENST00000340552 FLNCQ14315 2725 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms