RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 CRYGDP07320 174 aa15.49■□□□□ 0.07
RUNX3-202ENST00000338888 CLPSL1A2RUU4 121 aa15.49■□□□□ 0.07
RUNX3-202ENST00000338888 DUSP14O95147 198 aaKnown RBP15.49■□□□□ 0.07
RUNX3-202ENST00000338888 RNF223E7ERA6 249 aa15.48■□□□□ 0.07
RUNX3-202ENST00000338888 ATRXP46100 2492 aa15.48■□□□□ 0.07
RUNX3-202ENST00000338888 IGHV7-81A0A0B4J1V7 117 aa15.48■□□□□ 0.07
RUNX3-202ENST00000338888 LY6G5BQ8NDX9 201 aa15.48■□□□□ 0.07
RUNX3-202ENST00000338888 CACNA1BQ00975 2339 aa15.48■□□□□ 0.07
RUNX3-202ENST00000338888 B9A039 149 aa15.47■□□□□ 0.07
RUNX3-202ENST00000338888 LY6HO94772 140 aa15.47■□□□□ 0.07
RUNX3-202ENST00000338888 PRTN3P24158 256 aa15.47■□□□□ 0.07
RUNX3-202ENST00000338888 GAGE5Q13069 117 aa15.47■□□□□ 0.07
RUNX3-202ENST00000338888 GAGE6Q13070 117 aa15.47■□□□□ 0.07
RUNX3-202ENST00000338888 C9orf47Q6ZRZ4 202 aa15.47■□□□□ 0.07
RUNX3-202ENST00000338888 DPH3P1Q9H4G8 78 aa15.47■□□□□ 0.07
RUNX3-202ENST00000338888 NBASA2RRP1 2371 aa15.47■□□□□ 0.07
RUNX3-202ENST00000338888 B5MCH6 92 aa15.47■□□□□ 0.07
RUNX3-202ENST00000338888 S100A4P26447 101 aaKnown RBP15.47■□□□□ 0.07
RUNX3-202ENST00000338888 C10orf126Q8N4M7 172 aa15.47■□□□□ 0.07
RUNX3-202ENST00000338888 NCOR2Q9Y618 2525 aa15.47■□□□□ 0.07
RUNX3-202ENST00000338888 IGHV3-30P01768 117 aa15.47■□□□□ 0.07
RUNX3-202ENST00000338888 IGHV3-30-5P0DP03 117 aa15.47■□□□□ 0.07
RUNX3-202ENST00000338888 ECSCRQ19T08 205 aa15.47■□□□□ 0.07
RUNX3-202ENST00000338888 CLEC19AQ6UXS0 136 aa15.47■□□□□ 0.07
RUNX3-202ENST00000338888 IGLV4-69A0A075B6H9 119 aa15.46■□□□□ 0.06
RUNX3-202ENST00000338888 TMEM262E9PQX1 116 aa15.46■□□□□ 0.06
RUNX3-202ENST00000338888 RAX2Q96IS3 184 aa15.46■□□□□ 0.06
RUNX3-202ENST00000338888 CRIP2P52943 208 aaPredicted RBP15.45■□□□□ 0.06
RUNX3-202ENST00000338888 TSPEAR-AS2P59090 65 aa15.45■□□□□ 0.06
RUNX3-202ENST00000338888 ANXA2RQ3ZCQ2 193 aa15.45■□□□□ 0.06
RUNX3-202ENST00000338888 PRO1854Q9UHT4 67 aa15.45■□□□□ 0.06
RUNX3-202ENST00000338888 TSHBP01222 138 aa15.45■□□□□ 0.06
RUNX3-202ENST00000338888 HERVK_113P61574 105 aa15.45■□□□□ 0.06
RUNX3-202ENST00000338888 PHLDA3Q9Y5J5 127 aa15.45■□□□□ 0.06
RUNX3-202ENST00000338888 ODF3BA8MYP8 253 aa15.44■□□□□ 0.06
RUNX3-202ENST00000338888 C9JAW5 83 aa15.44■□□□□ 0.06
RUNX3-202ENST00000338888 SLC25A20O43772 301 aa15.44■□□□□ 0.06
RUNX3-202ENST00000338888 NHLRC4P0CG21 123 aaPredicted RBP15.44■□□□□ 0.06
RUNX3-202ENST00000338888 AJUBAQ96IF1 538 aa15.44■□□□□ 0.06
RUNX3-202ENST00000338888 CITED1Q99966 193 aa15.44■□□□□ 0.06
RUNX3-202ENST00000338888 TRPT1Q86TN4 253 aaKnown RBP15.43■□□□□ 0.06
RUNX3-202ENST00000338888 C16orf92Q96LL3 132 aa15.43■□□□□ 0.06
RUNX3-202ENST00000338888 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.43■□□□□ 0.06
RUNX3-202ENST00000338888 TMEM170BQ5T4T1 132 aa15.43■□□□□ 0.06
RUNX3-202ENST00000338888 Q8N6K4 173 aa15.43■□□□□ 0.06
RUNX3-202ENST00000338888 SLC25A29Q8N8R3 303 aa15.43■□□□□ 0.06
RUNX3-202ENST00000338888 SVEP1Q4LDE5 3571 aa15.42■□□□□ 0.06
RUNX3-202ENST00000338888 CENPVL3A0A0U1RRI6 287 aa15.42■□□□□ 0.06
RUNX3-202ENST00000338888 TP53TG1Q9Y2A0 90 aa15.42■□□□□ 0.06
RUNX3-202ENST00000338888 ABCA4P78363 2273 aa15.42■□□□□ 0.06
RUNX3-202ENST00000338888 DCHS2Q6V1P9 2916 aa15.42■□□□□ 0.06
RUNX3-202ENST00000338888 CD3EP07766 207 aa15.42■□□□□ 0.06
RUNX3-202ENST00000338888 MRPL53Q96EL3 112 aaKnown RBP15.42■□□□□ 0.06
RUNX3-202ENST00000338888 CCDC140Q96MF4 163 aa15.42■□□□□ 0.06
RUNX3-202ENST00000338888 METTL26Q96S19 204 aa15.42■□□□□ 0.06
RUNX3-202ENST00000338888 LRBAP50851 2863 aa15.41■□□□□ 0.06
RUNX3-202ENST00000338888 H7C2G1 150 aa15.41■□□□□ 0.06
RUNX3-202ENST00000338888 ARL3P36405 182 aa15.41■□□□□ 0.06
RUNX3-202ENST00000338888 DEFB1P60022 68 aa15.41■□□□□ 0.06
RUNX3-202ENST00000338888 VMO1Q7Z5L0 202 aa15.41■□□□□ 0.06
RUNX3-202ENST00000338888 GPHB5Q86YW7 130 aa15.41■□□□□ 0.06
RUNX3-202ENST00000338888 C20orf173Q96LM9 149 aa15.41■□□□□ 0.06
RUNX3-202ENST00000338888 ASIPP42127 132 aa15.4■□□□□ 0.06
RUNX3-202ENST00000338888 RPL39P62891 51 aaKnown RBP15.4■□□□□ 0.06
RUNX3-202ENST00000338888 Q8N9W7 124 aa15.4■□□□□ 0.06
RUNX3-202ENST00000338888 FAM110DQ8TAY7 271 aaPredicted RBP15.4■□□□□ 0.06
RUNX3-202ENST00000338888 TRAV4A0A0B4J268 109 aa15.39■□□□□ 0.05
RUNX3-202ENST00000338888 GAGE2BQ13066 116 aa15.39■□□□□ 0.05
RUNX3-202ENST00000338888 PMVKQ15126 192 aa15.39■□□□□ 0.05
RUNX3-202ENST00000338888 GAGE2EQ4V326 116 aa15.39■□□□□ 0.05
RUNX3-202ENST00000338888 TIMD4Q96H15 378 aa15.39■□□□□ 0.05
RUNX3-202ENST00000338888 GAGE2DQ9UEU5 116 aa15.39■□□□□ 0.05
RUNX3-202ENST00000338888 GNRH2O43555 120 aa15.39■□□□□ 0.05
RUNX3-202ENST00000338888 CRLF1O75462 422 aa15.39■□□□□ 0.05
RUNX3-202ENST00000338888 SRD5A1P18405 259 aa15.39■□□□□ 0.05
RUNX3-202ENST00000338888 PAPPA-AS1Q5QFB9 102 aa15.39■□□□□ 0.05
RUNX3-202ENST00000338888 A4D1N5 150 aa15.38■□□□□ 0.05
RUNX3-202ENST00000338888 IGIPA6NJ69 53 aa15.38■□□□□ 0.05
RUNX3-202ENST00000338888 G3V318 75 aa15.38■□□□□ 0.05
RUNX3-202ENST00000338888 RHODO00212 210 aa15.38■□□□□ 0.05
RUNX3-202ENST00000338888 ATP6V0E1O15342 81 aa15.38■□□□□ 0.05
RUNX3-202ENST00000338888 ZFAND2AQ8N6M9 145 aa15.38■□□□□ 0.05
RUNX3-202ENST00000338888 SNCGO76070 127 aa15.38■□□□□ 0.05
RUNX3-202ENST00000338888 ZNRF2Q8NHG8 242 aa15.38■□□□□ 0.05
RUNX3-202ENST00000338888 TRAV21A0A0B4J279 112 aa15.37■□□□□ 0.05
RUNX3-202ENST00000338888 UCNP55089 124 aa15.37■□□□□ 0.05
RUNX3-202ENST00000338888 EIF4EBP3O60516 100 aaPredicted RBP15.37■□□□□ 0.05
RUNX3-202ENST00000338888 COL6A6A6NMZ7 2263 aa15.37■□□□□ 0.05
RUNX3-202ENST00000338888 MED13LQ71F56 2210 aa15.36■□□□□ 0.05
RUNX3-202ENST00000338888 M0R1W7 72 aa15.36■□□□□ 0.05
RUNX3-202ENST00000338888 NDUFV3P56181 108 aaKnown RBP15.36■□□□□ 0.05
RUNX3-202ENST00000338888 LINC01560Q8TB33 94 aa15.36■□□□□ 0.05
RUNX3-202ENST00000338888 NTN5Q8WTR8 489 aaPredicted RBP15.36■□□□□ 0.05
RUNX3-202ENST00000338888 AMELXQ99217 191 aa15.36■□□□□ 0.05
RUNX3-202ENST00000338888 J3QQQ9 107 aa15.36■□□□□ 0.05
RUNX3-202ENST00000338888 EBI3Q14213 229 aa15.36■□□□□ 0.05
RUNX3-202ENST00000338888 RNASE4P34096 147 aaKnown RBP15.35■□□□□ 0.05
RUNX3-202ENST00000338888 IGHV1-69DA0A0B4J2H0 117 aa15.35■□□□□ 0.05
RUNX3-202ENST00000338888 IGHV3-33P01772 117 aa15.35■□□□□ 0.05
RUNX3-202ENST00000338888 LGALS3P17931 250 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms