RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 CFHR3Q02985 330 aa11.38□□□□□ -0.59
TNFSF13-201ENST00000338784 APRG1Q8IVJ8 170 aa11.38□□□□□ -0.59
TNFSF13-201ENST00000338784 TRAV8-6A0A0B4J262 113 aa11.37□□□□□ -0.59
TNFSF13-201ENST00000338784 AVPP01185 164 aa11.37□□□□□ -0.59
TNFSF13-201ENST00000338784 MED14OSP0DP75 135 aa11.37□□□□□ -0.59
TNFSF13-201ENST00000338784 ZNF479Q96JC4 524 aa11.37□□□□□ -0.59
TNFSF13-201ENST00000338784 SMIM2Q9BVW6 85 aa11.37□□□□□ -0.59
TNFSF13-201ENST00000338784 DPH3P1Q9H4G8 78 aa11.37□□□□□ -0.59
TNFSF13-201ENST00000338784 IGKV2D-26A0A0A0MRZ7 120 aa11.37□□□□□ -0.59
TNFSF13-201ENST00000338784 H3BRM9 83 aa11.37□□□□□ -0.59
TNFSF13-201ENST00000338784 TMEM160Q9NX00 188 aa11.37□□□□□ -0.59
TNFSF13-201ENST00000338784 CELSR1Q9NYQ6 3014 aa11.36□□□□□ -0.59
TNFSF13-201ENST00000338784 K7EMT4 169 aa11.36□□□□□ -0.59
TNFSF13-201ENST00000338784 SPRY2O43597 315 aa11.36□□□□□ -0.59
TNFSF13-201ENST00000338784 GATA3P23771 443 aa11.36□□□□□ -0.59
TNFSF13-201ENST00000338784 KIR3DS1Q14943 382 aa11.36□□□□□ -0.59
TNFSF13-201ENST00000338784 ZC2HC1BQ5TFG8 222 aa11.36□□□□□ -0.59
TNFSF13-201ENST00000338784 HIST2H2BCQ6DN03 193 aa11.36□□□□□ -0.59
TNFSF13-201ENST00000338784 C14orf178Q8N769 122 aaPredicted RBP11.36□□□□□ -0.59
TNFSF13-201ENST00000338784 C20orf78Q9BR46 151 aa11.36□□□□□ -0.59
TNFSF13-201ENST00000338784 SUMO2P61956 95 aaKnown RBP11.36□□□□□ -0.59
TNFSF13-201ENST00000338784 ORMDL2Q53FV1 153 aa11.36□□□□□ -0.59
TNFSF13-201ENST00000338784 GTSCR1Q86UQ5 136 aa11.36□□□□□ -0.59
TNFSF13-201ENST00000338784 RNASE8Q8TDE3 154 aaKnown RBP11.36□□□□□ -0.59
TNFSF13-201ENST00000338784 MRPL35Q9NZE8 188 aaKnown RBP11.36□□□□□ -0.59
TNFSF13-201ENST00000338784 ZNF580Q9UK33 172 aa11.36□□□□□ -0.59
TNFSF13-201ENST00000338784 CRYBG3Q68DQ2 2970 aa11.35□□□□□ -0.59
TNFSF13-201ENST00000338784 A0A087WX48 190 aa11.35□□□□□ -0.59
TNFSF13-201ENST00000338784 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.35□□□□□ -0.59
TNFSF13-201ENST00000338784 GNRH2O43555 120 aa11.35□□□□□ -0.59
TNFSF13-201ENST00000338784 DSCR9P59020 149 aa11.35□□□□□ -0.59
TNFSF13-201ENST00000338784 RASL10AQ92737 203 aa11.35□□□□□ -0.59
TNFSF13-201ENST00000338784 AP1S3Q96PC3 154 aa11.35□□□□□ -0.59
TNFSF13-201ENST00000338784 HIGD1BQ9P298 99 aa11.35□□□□□ -0.59
TNFSF13-201ENST00000338784 C9orf118A6NHY6 69 aa11.34□□□□□ -0.59
TNFSF13-201ENST00000338784 SRD5A1P18405 259 aa11.34□□□□□ -0.59
TNFSF13-201ENST00000338784 ID1P41134 155 aa11.34□□□□□ -0.59
TNFSF13-201ENST00000338784 SELENOKQ9Y6D0 94 aa11.34□□□□□ -0.59
TNFSF13-201ENST00000338784 CELSR2Q9HCU4 2923 aa11.34□□□□□ -0.59
TNFSF13-201ENST00000338784 K7EMI3 77 aa11.34□□□□□ -0.59
TNFSF13-201ENST00000338784 RNASE3P12724 160 aaKnown RBP11.34□□□□□ -0.59
TNFSF13-201ENST00000338784 SAMD13Q5VXD3 122 aa11.34□□□□□ -0.59
TNFSF13-201ENST00000338784 MGPP08493 103 aa11.33□□□□□ -0.6
TNFSF13-201ENST00000338784 HLA-DRB4P13762 266 aa11.33□□□□□ -0.6
TNFSF13-201ENST00000338784 SLC25A16P16260 332 aa11.33□□□□□ -0.6
TNFSF13-201ENST00000338784 PLNP26678 52 aa11.33□□□□□ -0.6
TNFSF13-201ENST00000338784 PSMB8P28062 276 aa11.33□□□□□ -0.6
TNFSF13-201ENST00000338784 RPL39LQ96EH5 51 aaKnown RBP11.33□□□□□ -0.6
TNFSF13-201ENST00000338784 TTTY13Q9BZ97 58 aa11.33□□□□□ -0.6
TNFSF13-201ENST00000338784 HLA-DRB4X5D2U9 266 aa11.33□□□□□ -0.6
TNFSF13-201ENST00000338784 KLLNB2CW77 178 aa11.32□□□□□ -0.6
TNFSF13-201ENST00000338784 EDN2P20800 178 aa11.32□□□□□ -0.6
TNFSF13-201ENST00000338784 TOMM6Q96B49 74 aa11.32□□□□□ -0.6
TNFSF13-201ENST00000338784 ABCA12Q86UK0 2595 aa11.32□□□□□ -0.6
TNFSF13-201ENST00000338784 TRAV12-1A0A0B4J245 112 aa11.32□□□□□ -0.6
TNFSF13-201ENST00000338784 GAGE10A6NGK3 116 aa11.32□□□□□ -0.6
TNFSF13-201ENST00000338784 PPP1R17O96001 155 aa11.32□□□□□ -0.6
TNFSF13-201ENST00000338784 IGHV4-59P01825 116 aa11.32□□□□□ -0.6
TNFSF13-201ENST00000338784 DCANP1Q8TF63 244 aa11.32□□□□□ -0.6
TNFSF13-201ENST00000338784 DEFB112Q30KQ8 113 aa11.31□□□□□ -0.6
TNFSF13-201ENST00000338784 FAM159AQ6UWV7 190 aa11.31□□□□□ -0.6
TNFSF13-201ENST00000338784 SCGB3A1Q96QR1 104 aa11.31□□□□□ -0.6
TNFSF13-201ENST00000338784 CHAC1Q9BUX1 264 aa11.31□□□□□ -0.6
TNFSF13-201ENST00000338784 TRBV25-1A0A075B6N4 114 aa11.3□□□□□ -0.6
TNFSF13-201ENST00000338784 H3BUT2 72 aa11.3□□□□□ -0.6
TNFSF13-201ENST00000338784 H7C1H1 209 aa11.3□□□□□ -0.6
TNFSF13-201ENST00000338784 NXPH4O95158 308 aa11.3□□□□□ -0.6
TNFSF13-201ENST00000338784 GTF2H5Q6ZYL4 71 aa11.3□□□□□ -0.6
TNFSF13-201ENST00000338784 LINC01356Q8N9X3 169 aa11.3□□□□□ -0.6
TNFSF13-201ENST00000338784 NRGNQ92686 78 aa11.3□□□□□ -0.6
TNFSF13-201ENST00000338784 TEP1Q99973 2627 aaKnown RBP11.3□□□□□ -0.6
TNFSF13-201ENST00000338784 GAGE12BA1L429 117 aa11.3□□□□□ -0.6
TNFSF13-201ENST00000338784 F8VRH5 84 aa11.3□□□□□ -0.6
TNFSF13-201ENST00000338784 GCSHP23434 173 aa11.3□□□□□ -0.6
TNFSF13-201ENST00000338784 RBX1P62877 108 aa11.3□□□□□ -0.6
TNFSF13-201ENST00000338784 POM121L12Q8N7R1 296 aa11.3□□□□□ -0.6
TNFSF13-201ENST00000338784 RNF223E7ERA6 249 aa11.29□□□□□ -0.6
TNFSF13-201ENST00000338784 RAB37Q96AX2 223 aa11.29□□□□□ -0.6
TNFSF13-201ENST00000338784 CST9LQ9H4G1 147 aa11.29□□□□□ -0.6
TNFSF13-201ENST00000338784 TMEM89A2RUT3 159 aa11.28□□□□□ -0.6
TNFSF13-201ENST00000338784 C2orf66Q6UXQ4 117 aa11.28□□□□□ -0.6
TNFSF13-201ENST00000338784 JMJD8Q96S16 334 aa11.28□□□□□ -0.6
TNFSF13-201ENST00000338784 TGFAP01135 160 aa11.28□□□□□ -0.6
TNFSF13-201ENST00000338784 SMIM13P0DJ93 91 aa11.28□□□□□ -0.6
TNFSF13-201ENST00000338784 C10orf99Q6UWK7 81 aa11.28□□□□□ -0.6
TNFSF13-201ENST00000338784 NEXN-AS1Q8NBZ9 246 aa11.28□□□□□ -0.6
TNFSF13-201ENST00000338784 CSTL1Q9H114 145 aa11.28□□□□□ -0.6
TNFSF13-201ENST00000338784 KIF25-AS1Q9Y6Z4 181 aa11.28□□□□□ -0.6
TNFSF13-201ENST00000338784 FXYD2P54710 66 aa11.27□□□□□ -0.61
TNFSF13-201ENST00000338784 UFSP1Q6NVU6 142 aa11.27□□□□□ -0.61
TNFSF13-201ENST00000338784 NAA38Q9BRA0 125 aaKnown RBP11.27□□□□□ -0.61
TNFSF13-201ENST00000338784 SPG11Q96JI7 2443 aa11.27□□□□□ -0.61
TNFSF13-201ENST00000338784 TRAV12-3A0A0B4J271 114 aa11.27□□□□□ -0.61
TNFSF13-201ENST00000338784 J3QLI3 93 aa11.27□□□□□ -0.61
TNFSF13-201ENST00000338784 LINC00315P59091 139 aa11.27□□□□□ -0.61
TNFSF13-201ENST00000338784 MAPKAPK5-AS1Q8N8E1 139 aa11.27□□□□□ -0.61
TNFSF13-201ENST00000338784 IGHV4OR15-8A0A075B7B6 117 aa11.26□□□□□ -0.61
TNFSF13-201ENST00000338784 A0A087WW49 117 aa11.26□□□□□ -0.61
TNFSF13-201ENST00000338784 K7EP34 96 aa11.26□□□□□ -0.61
TNFSF13-201ENST00000338784 CD7P09564 240 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms