RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 CNFNQ9BYD5 112 aa10.76□□□□□ -0.69
CDK5RAP3-201ENST00000338399 MSRB1Q9NZV6 116 aa10.76□□□□□ -0.69
CDK5RAP3-201ENST00000338399 ANK2Q01484 3957 aa10.76□□□□□ -0.69
CDK5RAP3-201ENST00000338399 IGHV3-16A0A0C4DH30 117 aa10.76□□□□□ -0.69
CDK5RAP3-201ENST00000338399 PRM2P04554 102 aa10.76□□□□□ -0.69
CDK5RAP3-201ENST00000338399 KRTAP10-11P60412 298 aa10.76□□□□□ -0.69
CDK5RAP3-201ENST00000338399 C1orf158Q8N1D5 194 aa10.76□□□□□ -0.69
CDK5RAP3-201ENST00000338399 TMEM208Q9BTX3 173 aa10.76□□□□□ -0.69
CDK5RAP3-201ENST00000338399 MDFICQ9P1T7 246 aa10.76□□□□□ -0.69
CDK5RAP3-201ENST00000338399 IGHV3OR16-12A0A075B7B8 117 aa10.75□□□□□ -0.69
CDK5RAP3-201ENST00000338399 A0A1B0GW15 77 aa10.75□□□□□ -0.69
CDK5RAP3-201ENST00000338399 TRGC1P0CF51 173 aa10.75□□□□□ -0.69
CDK5RAP3-201ENST00000338399 MED14OSP0DP75 135 aa10.75□□□□□ -0.69
CDK5RAP3-201ENST00000338399 SPANXN1Q5VSR9 72 aa10.75□□□□□ -0.69
CDK5RAP3-201ENST00000338399 SCRT2Q9NQ03 307 aa10.75□□□□□ -0.69
CDK5RAP3-201ENST00000338399 PHLDA3Q9Y5J5 127 aa10.75□□□□□ -0.69
CDK5RAP3-201ENST00000338399 MUC4Q99102 2169 aa10.75□□□□□ -0.69
CDK5RAP3-201ENST00000338399 SLAQ13239 276 aa10.74□□□□□ -0.69
CDK5RAP3-201ENST00000338399 KIAA1644Q3SXP7 199 aa10.74□□□□□ -0.69
CDK5RAP3-201ENST00000338399 TRGV11A0A075B6L2 103 aa10.74□□□□□ -0.69
CDK5RAP3-201ENST00000338399 G3V4G9 280 aa10.74□□□□□ -0.69
CDK5RAP3-201ENST00000338399 APCSP02743 223 aa10.74□□□□□ -0.69
CDK5RAP3-201ENST00000338399 CACNG7P62955 275 aa10.74□□□□□ -0.69
CDK5RAP3-201ENST00000338399 EGFEM1PQ0D2K5 195 aa10.74□□□□□ -0.69
CDK5RAP3-201ENST00000338399 C1QTNF4Q9BXJ3 329 aa10.74□□□□□ -0.69
CDK5RAP3-201ENST00000338399 CSTL1Q9H114 145 aa10.74□□□□□ -0.69
CDK5RAP3-201ENST00000338399 M0R381 172 aa10.73□□□□□ -0.69
CDK5RAP3-201ENST00000338399 HIST1H2BKO60814 126 aa10.73□□□□□ -0.69
CDK5RAP3-201ENST00000338399 HIST1H2BJP06899 126 aa10.73□□□□□ -0.69
CDK5RAP3-201ENST00000338399 HIST1H2BOP23527 126 aa10.73□□□□□ -0.69
CDK5RAP3-201ENST00000338399 HIST1H2BBP33778 126 aa10.73□□□□□ -0.69
CDK5RAP3-201ENST00000338399 HIST1H2BDP58876 126 aa10.73□□□□□ -0.69
CDK5RAP3-201ENST00000338399 HIST1H2BCP62807 126 aa10.73□□□□□ -0.69
CDK5RAP3-201ENST00000338399 HIST2H2BEQ16778 126 aa10.73□□□□□ -0.69
CDK5RAP3-201ENST00000338399 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.73□□□□□ -0.69
CDK5RAP3-201ENST00000338399 TMEM256Q8N2U0 113 aa10.73□□□□□ -0.69
CDK5RAP3-201ENST00000338399 GATD1Q8NB37 220 aa10.73□□□□□ -0.69
CDK5RAP3-201ENST00000338399 HIST1H2BHQ93079 126 aa10.73□□□□□ -0.69
CDK5RAP3-201ENST00000338399 HIST1H2BNQ99877 126 aa10.73□□□□□ -0.69
CDK5RAP3-201ENST00000338399 HIST1H2BMQ99879 126 aa10.73□□□□□ -0.69
CDK5RAP3-201ENST00000338399 LINC00467Q9BRT7 94 aa10.73□□□□□ -0.69
CDK5RAP3-201ENST00000338399 IGHV4-4A0A075B6R2 117 aa10.72□□□□□ -0.69
CDK5RAP3-201ENST00000338399 LOC102724200A0A096LPH7 203 aaPredicted RBP10.72□□□□□ -0.69
CDK5RAP3-201ENST00000338399 ZNF493Q6ZR52 646 aa10.72□□□□□ -0.69
CDK5RAP3-201ENST00000338399 CSNK1G2-AS1Q8NCQ2 148 aa10.72□□□□□ -0.69
CDK5RAP3-201ENST00000338399 C9orf85Q96MD7 179 aa10.72□□□□□ -0.69
CDK5RAP3-201ENST00000338399 GOLT1BQ9Y3E0 138 aa10.72□□□□□ -0.69
CDK5RAP3-201ENST00000338399 DMRTA1Q5VZB9 504 aa10.71□□□□□ -0.69
CDK5RAP3-201ENST00000338399 IGHV4-30-4P0DP06 118 aa10.7□□□□□ -0.7
CDK5RAP3-201ENST00000338399 AZU1P20160 251 aa10.7□□□□□ -0.7
CDK5RAP3-201ENST00000338399 HOXA5P20719 270 aa10.7□□□□□ -0.7
CDK5RAP3-201ENST00000338399 SAMD5Q5TGI4 173 aa10.7□□□□□ -0.7
CDK5RAP3-201ENST00000338399 TMEM191AQ9H0A3 160 aa10.7□□□□□ -0.7
CDK5RAP3-201ENST00000338399 PKD1L1Q8TDX9 2849 aa10.7□□□□□ -0.7
CDK5RAP3-201ENST00000338399 EVI2AP22794 236 aa10.7□□□□□ -0.7
CDK5RAP3-201ENST00000338399 ZNF415Q09FC8 603 aa10.7□□□□□ -0.7
CDK5RAP3-201ENST00000338399 AMN1Q8IY45 258 aa10.7□□□□□ -0.7
CDK5RAP3-201ENST00000338399 FAM104BQ5XKR9 115 aa10.69□□□□□ -0.7
CDK5RAP3-201ENST00000338399 NXPH4O95158 308 aa10.68□□□□□ -0.7
CDK5RAP3-201ENST00000338399 SRIP30626 198 aa10.68□□□□□ -0.7
CDK5RAP3-201ENST00000338399 NDUFA6P56556 154 aa10.68□□□□□ -0.7
CDK5RAP3-201ENST00000338399 ZNF705AQ6ZN79 300 aaPredicted RBP10.68□□□□□ -0.7
CDK5RAP3-201ENST00000338399 SMIM15Q7Z3B0 74 aa10.68□□□□□ -0.7
CDK5RAP3-201ENST00000338399 C11orf72Q8NBR9 251 aa10.68□□□□□ -0.7
CDK5RAP3-201ENST00000338399 KIR2DL5BA0A0G2JN68 375 aa10.68□□□□□ -0.7
CDK5RAP3-201ENST00000338399 KIR2DL5BA0A0G2JPC4 375 aa10.68□□□□□ -0.7
CDK5RAP3-201ENST00000338399 IFITM10A6NMD0 228 aa10.68□□□□□ -0.7
CDK5RAP3-201ENST00000338399 APOC4P55056 127 aa10.68□□□□□ -0.7
CDK5RAP3-201ENST00000338399 KIR2DL5AQ8N109 375 aa10.68□□□□□ -0.7
CDK5RAP3-201ENST00000338399 KIR2DL5BQ8NHK3 375 aa10.68□□□□□ -0.7
CDK5RAP3-201ENST00000338399 RCHY1Q96PM5 261 aa10.68□□□□□ -0.7
CDK5RAP3-201ENST00000338399 SYT8Q8NBV8 401 aa10.67□□□□□ -0.7
CDK5RAP3-201ENST00000338399 RNF185Q96GF1 192 aa10.67□□□□□ -0.7
CDK5RAP3-201ENST00000338399 JPT2Q9H910 190 aa10.67□□□□□ -0.7
CDK5RAP3-201ENST00000338399 RAB4AP20338 218 aa10.66□□□□□ -0.7
CDK5RAP3-201ENST00000338399 ZNF876PQ49A33 203 aa10.66□□□□□ -0.7
CDK5RAP3-201ENST00000338399 MRPL51Q4U2R6 128 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP3-201ENST00000338399 C14orf178Q8N769 122 aaPredicted RBP10.66□□□□□ -0.7
CDK5RAP3-201ENST00000338399 RNASE8Q8TDE3 154 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP3-201ENST00000338399 ALKBH7Q9BT30 221 aaPredicted RBP10.66□□□□□ -0.7
CDK5RAP3-201ENST00000338399 RIPPLY3P57055 190 aa10.66□□□□□ -0.7
CDK5RAP3-201ENST00000338399 TMEM263Q8WUH6 116 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP3-201ENST00000338399 AP1S3Q96PC3 154 aa10.66□□□□□ -0.7
CDK5RAP3-201ENST00000338399 M0R2P5 195 aa10.65□□□□□ -0.7
CDK5RAP3-201ENST00000338399 RRN3P1Q2M238 152 aa10.65□□□□□ -0.7
CDK5RAP3-201ENST00000338399 PYY3Q5JQD4 70 aa10.65□□□□□ -0.7
CDK5RAP3-201ENST00000338399 SPXQ9BT56 116 aa10.65□□□□□ -0.7
CDK5RAP3-201ENST00000338399 D6R8Y8 96 aa10.64□□□□□ -0.71
CDK5RAP3-201ENST00000338399 S100A2P29034 98 aa10.64□□□□□ -0.71
CDK5RAP3-201ENST00000338399 DEFB135Q30KP9 77 aa10.64□□□□□ -0.71
CDK5RAP3-201ENST00000338399 DPH3P1Q9H4G8 78 aa10.64□□□□□ -0.71
CDK5RAP3-201ENST00000338399 DNAH3Q8TD57 4116 aa10.64□□□□□ -0.71
CDK5RAP3-201ENST00000338399 SMKR1H3BMG3 65 aa10.64□□□□□ -0.71
CDK5RAP3-201ENST00000338399 CKS2P33552 79 aa10.64□□□□□ -0.71
CDK5RAP3-201ENST00000338399 C16orf74Q96GX8 76 aa10.64□□□□□ -0.71
CDK5RAP3-201ENST00000338399 A0A087WWL8 130 aa10.63□□□□□ -0.71
CDK5RAP3-201ENST00000338399 NCR2O95944 276 aa10.63□□□□□ -0.71
CDK5RAP3-201ENST00000338399 MGPP08493 103 aa10.63□□□□□ -0.71
CDK5RAP3-201ENST00000338399 SMIM17P0DL12 118 aa10.63□□□□□ -0.71
CDK5RAP3-201ENST00000338399 IQCJQ1A5X6 159 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms