RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 TRBV6-1A0A0K0K1D8 114 aa4.84□□□□□ -1.63
PRKDC-202ENST00000338368 TDRG1Q3Y452 100 aa4.84□□□□□ -1.63
PRKDC-202ENST00000338368 SMIM2Q9BVW6 85 aa4.84□□□□□ -1.63
PRKDC-202ENST00000338368 MAJINQ3KP22 176 aa4.84□□□□□ -1.63
PRKDC-202ENST00000338368 TMEM86BQ8N661 226 aa4.84□□□□□ -1.63
PRKDC-202ENST00000338368 PCSK5Q92824 1860 aa4.84□□□□□ -1.63
PRKDC-202ENST00000338368 PSCAO43653 123 aa4.84□□□□□ -1.63
PRKDC-202ENST00000338368 CRXO43186 299 aaPredicted RBP4.84□□□□□ -1.63
PRKDC-202ENST00000338368 K7EMT4 169 aa4.84□□□□□ -1.64
PRKDC-202ENST00000338368 LOXL1Q08397 574 aaPredicted RBP4.84□□□□□ -1.64
PRKDC-202ENST00000338368 MRPL35Q9NZE8 188 aaKnown RBP4.84□□□□□ -1.64
PRKDC-202ENST00000338368 MBD6Q96DN6 1003 aa4.84□□□□□ -1.64
PRKDC-202ENST00000338368 SPCS1Q9Y6A9 102 aa4.84□□□□□ -1.64
PRKDC-202ENST00000338368 ESDP10768 282 aa4.83□□□□□ -1.64
PRKDC-202ENST00000338368 ZNF80P51504 273 aaPredicted RBP4.83□□□□□ -1.64
PRKDC-202ENST00000338368 C9orf47Q6ZRZ4 202 aa4.83□□□□□ -1.64
PRKDC-202ENST00000338368 IGHV3-64A0A075B6Q5 118 aa4.83□□□□□ -1.64
PRKDC-202ENST00000338368 DEFB136Q30KP8 78 aa4.83□□□□□ -1.64
PRKDC-202ENST00000338368 C20orf78Q9BR46 151 aa4.83□□□□□ -1.64
PRKDC-202ENST00000338368 IGKV3D-20A0A0C4DH25 116 aa4.83□□□□□ -1.64
PRKDC-202ENST00000338368 MRPL16Q9NX20 251 aaKnown RBP4.83□□□□□ -1.64
PRKDC-202ENST00000338368 LINC00173Q6ZV60 143 aa4.83□□□□□ -1.64
PRKDC-202ENST00000338368 ABCA12Q86UK0 2595 aa4.83□□□□□ -1.64
PRKDC-202ENST00000338368 TRBV12-3P01733 135 aa4.83□□□□□ -1.64
PRKDC-202ENST00000338368 RPL35AP18077 110 aaKnown RBP4.83□□□□□ -1.64
PRKDC-202ENST00000338368 PIEZO2Q9H5I5 2752 aa4.83□□□□□ -1.64
PRKDC-202ENST00000338368 CDK2AP2O75956 126 aa4.83□□□□□ -1.64
PRKDC-202ENST00000338368 IGHG4P01861 327 aa4.83□□□□□ -1.64
PRKDC-202ENST00000338368 PLNP26678 52 aa4.83□□□□□ -1.64
PRKDC-202ENST00000338368 PHLDA1Q8WV24 401 aaPredicted RBP4.83□□□□□ -1.64
PRKDC-202ENST00000338368 KLK5Q9Y337 293 aaPredicted RBP4.83□□□□□ -1.64
PRKDC-202ENST00000338368 FOXI2Q6ZQN5 318 aa4.83□□□□□ -1.64
PRKDC-202ENST00000338368 TOMM7Q9P0U1 55 aa4.83□□□□□ -1.64
PRKDC-202ENST00000338368 NAA38Q9BRA0 125 aaKnown RBP4.82□□□□□ -1.64
PRKDC-202ENST00000338368 IGHV4OR15-8A0A075B7B6 117 aa4.82□□□□□ -1.64
PRKDC-202ENST00000338368 A0A087WW49 117 aa4.82□□□□□ -1.64
PRKDC-202ENST00000338368 CD5LO43866 347 aa4.82□□□□□ -1.64
PRKDC-202ENST00000338368 DKK2Q9UBU2 259 aa4.82□□□□□ -1.64
PRKDC-202ENST00000338368 TSSC4Q9Y5U2 329 aaPredicted RBP4.82□□□□□ -1.64
PRKDC-202ENST00000338368 RIPPLY3P57055 190 aa4.82□□□□□ -1.64
PRKDC-202ENST00000338368 PKD1L2Q7Z442 2459 aa4.82□□□□□ -1.64
PRKDC-202ENST00000338368 CFAP161Q6P656 301 aa4.82□□□□□ -1.64
PRKDC-202ENST00000338368 NEGR1Q7Z3B1 354 aa4.82□□□□□ -1.64
PRKDC-202ENST00000338368 RHODO00212 210 aa4.82□□□□□ -1.64
PRKDC-202ENST00000338368 CHCHD5Q9BSY4 110 aa4.82□□□□□ -1.64
PRKDC-202ENST00000338368 CHAC1Q9BUX1 264 aa4.82□□□□□ -1.64
PRKDC-202ENST00000338368 DEFB1P60022 68 aa4.82□□□□□ -1.64
PRKDC-202ENST00000338368 GPHB5Q86YW7 130 aa4.82□□□□□ -1.64
PRKDC-202ENST00000338368 SIGMAR1Q99720 223 aa4.82□□□□□ -1.64
PRKDC-202ENST00000338368 A8MWV9 139 aa4.82□□□□□ -1.64
PRKDC-202ENST00000338368 COL4A2P08572 1712 aa4.82□□□□□ -1.64
PRKDC-202ENST00000338368 A0A1B0GXF2 115 aa4.81□□□□□ -1.64
PRKDC-202ENST00000338368 I3L3M4 83 aa4.81□□□□□ -1.64
PRKDC-202ENST00000338368 Q71RC1 249 aaPredicted RBP4.81□□□□□ -1.64
PRKDC-202ENST00000338368 ZNF479Q96JC4 524 aa4.81□□□□□ -1.64
PRKDC-202ENST00000338368 TRAV2A0A0B4J234 112 aa4.81□□□□□ -1.64
PRKDC-202ENST00000338368 ADARB2-AS1A8MUL3 147 aa4.81□□□□□ -1.64
PRKDC-202ENST00000338368 COX8AP10176 69 aa4.81□□□□□ -1.64
PRKDC-202ENST00000338368 SLURP1P55000 103 aa4.81□□□□□ -1.64
PRKDC-202ENST00000338368 ZFAND3Q9H8U3 227 aa4.81□□□□□ -1.64
PRKDC-202ENST00000338368 KIR2DL5BA0A0G2JN68 375 aa4.81□□□□□ -1.64
PRKDC-202ENST00000338368 KIR2DL5BA0A0G2JPC4 375 aa4.81□□□□□ -1.64
PRKDC-202ENST00000338368 KIR2DL5AQ8N109 375 aa4.81□□□□□ -1.64
PRKDC-202ENST00000338368 SPXQ9BT56 116 aa4.81□□□□□ -1.64
PRKDC-202ENST00000338368 CCL24O00175 119 aa4.81□□□□□ -1.64
PRKDC-202ENST00000338368 UBE2V1Q13404 147 aa4.81□□□□□ -1.64
PRKDC-202ENST00000338368 GDF5OSQ5U4N7 250 aa4.81□□□□□ -1.64
PRKDC-202ENST00000338368 ZNF493Q6ZR52 646 aa4.81□□□□□ -1.64
PRKDC-202ENST00000338368 LRRC75A-AS1Q8N1F1 130 aa4.81□□□□□ -1.64
PRKDC-202ENST00000338368 ZNRF2Q8NHG8 242 aa4.81□□□□□ -1.64
PRKDC-202ENST00000338368 SPAG8Q99932 426 aaPredicted RBP4.81□□□□□ -1.64
PRKDC-202ENST00000338368 TP53TG3Q9ULZ0 132 aa4.81□□□□□ -1.64
PRKDC-202ENST00000338368 SMAD5-AS1Q9Y6J3 95 aa4.81□□□□□ -1.64
PRKDC-202ENST00000338368 LINC01545Q5VT33 79 aa4.81□□□□□ -1.64
PRKDC-202ENST00000338368 C9orf66Q5T8R8 295 aa4.8□□□□□ -1.64
PRKDC-202ENST00000338368 APRG1Q8IVJ8 170 aa4.8□□□□□ -1.64
PRKDC-202ENST00000338368 C2CD3Q4AC94 2353 aa4.8□□□□□ -1.64
PRKDC-202ENST00000338368 IGHV3-16A0A0C4DH30 117 aa4.8□□□□□ -1.64
PRKDC-202ENST00000338368 IGLC6P0CF74 106 aa4.8□□□□□ -1.64
PRKDC-202ENST00000338368 C10orf126Q8N4M7 172 aa4.8□□□□□ -1.64
PRKDC-202ENST00000338368 A0A1B0GWB2 263 aa4.8□□□□□ -1.64
PRKDC-202ENST00000338368 C2orf70A6NJV1 201 aa4.8□□□□□ -1.64
PRKDC-202ENST00000338368 PMVKQ15126 192 aa4.8□□□□□ -1.64
PRKDC-202ENST00000338368 SAMD5Q5TGI4 173 aa4.8□□□□□ -1.64
PRKDC-202ENST00000338368 HTN3P15516 51 aa4.8□□□□□ -1.64
PRKDC-202ENST00000338368 CTRLP40313 264 aa4.8□□□□□ -1.64
PRKDC-202ENST00000338368 MTORP42345 2549 aa4.8□□□□□ -1.64
PRKDC-202ENST00000338368 F8W1H4 67 aa4.8□□□□□ -1.64
PRKDC-202ENST00000338368 TMEM141Q96I45 108 aa4.8□□□□□ -1.64
PRKDC-202ENST00000338368 A0A0U1RRA0 63 aa4.8□□□□□ -1.64
PRKDC-202ENST00000338368 DEFB130BP0DP73 79 aa4.8□□□□□ -1.64
PRKDC-202ENST00000338368 DEFB130AP0DP74 79 aa4.8□□□□□ -1.64
PRKDC-202ENST00000338368 ZNF462Q96JM2 2506 aa4.8□□□□□ -1.64
PRKDC-202ENST00000338368 CENPFP49454 3210 aa4.8□□□□□ -1.64
PRKDC-202ENST00000338368 FASNP49327 2511 aaKnown RBP4.79□□□□□ -1.64
PRKDC-202ENST00000338368 AZU1P20160 251 aa4.79□□□□□ -1.64
PRKDC-202ENST00000338368 KIR3DS1Q14943 382 aa4.79□□□□□ -1.64
PRKDC-202ENST00000338368 Q6ZS46 218 aa4.79□□□□□ -1.64
PRKDC-202ENST00000338368 TRAV13-1A0A0B4J241 112 aa4.79□□□□□ -1.64
PRKDC-202ENST00000338368 K7EMI3 77 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 178.1 ms