RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 C18orf15Q96N68 181 aa8.45□□□□□ -1.06
SPTLC1-202ENST00000337841 IL36BQ9NZH7 164 aa8.45□□□□□ -1.06
SPTLC1-202ENST00000337841 NAT8Q9UHE5 227 aa8.45□□□□□ -1.06
SPTLC1-202ENST00000337841 F5H768 121 aa8.44□□□□□ -1.06
SPTLC1-202ENST00000337841 K7EN84 100 aa8.44□□□□□ -1.06
SPTLC1-202ENST00000337841 GATCO43716 136 aaKnown RBP8.44□□□□□ -1.06
SPTLC1-202ENST00000337841 RNASE3P12724 160 aaKnown RBP8.44□□□□□ -1.06
SPTLC1-202ENST00000337841 ERVFC1-1P60608 527 aa8.44□□□□□ -1.06
SPTLC1-202ENST00000337841 RPL19P84098 196 aaKnown RBP8.44□□□□□ -1.06
SPTLC1-202ENST00000337841 ZNF876PQ49A33 203 aa8.44□□□□□ -1.06
SPTLC1-202ENST00000337841 CASC10Q5T4H9 136 aa8.44□□□□□ -1.06
SPTLC1-202ENST00000337841 LINC01551Q86U37 167 aa8.44□□□□□ -1.06
SPTLC1-202ENST00000337841 SYT8Q8NBV8 401 aa8.44□□□□□ -1.06
SPTLC1-202ENST00000337841 NDUFAF3Q9BU61 184 aa8.44□□□□□ -1.06
SPTLC1-202ENST00000337841 PHLDA3Q9Y5J5 127 aa8.44□□□□□ -1.06
SPTLC1-202ENST00000337841 H3BVH4 76 aa8.43□□□□□ -1.06
SPTLC1-202ENST00000337841 MED14OSP0DP75 135 aa8.43□□□□□ -1.06
SPTLC1-202ENST00000337841 PIK3CD-AS1Q5SR53 167 aa8.43□□□□□ -1.06
SPTLC1-202ENST00000337841 FAM231DQ6ZW35 169 aa8.43□□□□□ -1.06
SPTLC1-202ENST00000337841 C15orf54Q8N8G6 183 aa8.43□□□□□ -1.06
SPTLC1-202ENST00000337841 FAM210BQ96KR6 192 aa8.43□□□□□ -1.06
SPTLC1-202ENST00000337841 RNASE7Q9H1E1 156 aaKnown RBP8.43□□□□□ -1.06
SPTLC1-202ENST00000337841 LINC00862A6NCI5 91 aa8.42□□□□□ -1.06
SPTLC1-202ENST00000337841 IGLL5B9A064 214 aa8.42□□□□□ -1.06
SPTLC1-202ENST00000337841 CIDEAO60543 219 aa8.42□□□□□ -1.06
SPTLC1-202ENST00000337841 SFTA3P0C7M3 94 aa8.42□□□□□ -1.06
SPTLC1-202ENST00000337841 TCTAP57738 103 aa8.42□□□□□ -1.06
SPTLC1-202ENST00000337841 SLAQ13239 276 aa8.42□□□□□ -1.06
SPTLC1-202ENST00000337841 COMMD7Q86VX2 200 aa8.42□□□□□ -1.06
SPTLC1-202ENST00000337841 ZNF575Q86XF7 245 aa8.42□□□□□ -1.06
SPTLC1-202ENST00000337841 OR4C5Q8NGB2 326 aa8.42□□□□□ -1.06
SPTLC1-202ENST00000337841 RPP21Q9H633 154 aaKnown RBP8.42□□□□□ -1.06
SPTLC1-202ENST00000337841 SCRT2Q9NQ03 307 aa8.42□□□□□ -1.06
SPTLC1-202ENST00000337841 OSTCQ9NRP0 149 aa8.42□□□□□ -1.06
SPTLC1-202ENST00000337841 TRAV4A0A0B4J268 109 aa8.41□□□□□ -1.06
SPTLC1-202ENST00000337841 A0A1W2PPQ1 181 aa8.41□□□□□ -1.06
SPTLC1-202ENST00000337841 A8MWL6 223 aa8.41□□□□□ -1.06
SPTLC1-202ENST00000337841 F2Z2F3 143 aa8.41□□□□□ -1.06
SPTLC1-202ENST00000337841 IGHV3-53P01767 116 aa8.41□□□□□ -1.06
SPTLC1-202ENST00000337841 OR5AL1P0C617 328 aa8.41□□□□□ -1.06
SPTLC1-202ENST00000337841 RPL23P62829 140 aaKnown RBP8.41□□□□□ -1.06
SPTLC1-202ENST00000337841 ADIRFQ15847 76 aa8.41□□□□□ -1.06
SPTLC1-202ENST00000337841 ZFP82Q8N141 532 aa8.41□□□□□ -1.06
SPTLC1-202ENST00000337841 FER1L6-AS1Q8NA97 138 aa8.41□□□□□ -1.06
SPTLC1-202ENST00000337841 SSBP4Q9BWG4 385 aaPredicted RBP8.41□□□□□ -1.06
SPTLC1-202ENST00000337841 TRGV4A0A0C4DH28 118 aa8.4□□□□□ -1.06
SPTLC1-202ENST00000337841 A8MWV9 139 aa8.4□□□□□ -1.06
SPTLC1-202ENST00000337841 M0R381 172 aa8.4□□□□□ -1.06
SPTLC1-202ENST00000337841 RS1O15537 224 aa8.4□□□□□ -1.06
SPTLC1-202ENST00000337841 SNAI2O43623 268 aa8.4□□□□□ -1.06
SPTLC1-202ENST00000337841 SPANXN1Q5VSR9 72 aa8.4□□□□□ -1.06
SPTLC1-202ENST00000337841 OR10G8Q8NGN5 311 aa8.4□□□□□ -1.06
SPTLC1-202ENST00000337841 ISOC2Q96AB3 205 aa8.4□□□□□ -1.06
SPTLC1-202ENST00000337841 TPPP3Q9BW30 176 aa8.4□□□□□ -1.06
SPTLC1-202ENST00000337841 IGHV4-4A0A075B6R2 117 aa8.39□□□□□ -1.07
SPTLC1-202ENST00000337841 TMEM218A2RU14 115 aa8.39□□□□□ -1.07
SPTLC1-202ENST00000337841 GZMBP10144 247 aa8.39□□□□□ -1.07
SPTLC1-202ENST00000337841 CACNG7P62955 275 aa8.39□□□□□ -1.07
SPTLC1-202ENST00000337841 CT83Q5H943 113 aa8.39□□□□□ -1.07
SPTLC1-202ENST00000337841 HHLA3Q9XRX5 114 aa8.39□□□□□ -1.07
SPTLC1-202ENST00000337841 F8W036 122 aa8.38□□□□□ -1.07
SPTLC1-202ENST00000337841 IGLC6P0CF74 106 aa8.38□□□□□ -1.07
SPTLC1-202ENST00000337841 HOXA5P20719 270 aa8.38□□□□□ -1.07
SPTLC1-202ENST00000337841 SSTP61278 116 aa8.38□□□□□ -1.07
SPTLC1-202ENST00000337841 PNRC1Q12796 327 aaPredicted RBP8.38□□□□□ -1.07
SPTLC1-202ENST00000337841 FHL2Q14192 279 aa8.38□□□□□ -1.07
SPTLC1-202ENST00000337841 LCE2AQ5TA79 106 aaPredicted RBP8.38□□□□□ -1.07
SPTLC1-202ENST00000337841 CFAP126Q5VTH2 177 aa8.38□□□□□ -1.07
SPTLC1-202ENST00000337841 WDR73Q6P4I2 378 aa8.38□□□□□ -1.07
SPTLC1-202ENST00000337841 TMEM88Q6PEY1 159 aa8.38□□□□□ -1.07
SPTLC1-202ENST00000337841 LYZL1Q6UWQ5 148 aa8.38□□□□□ -1.07
SPTLC1-202ENST00000337841 POM121L12Q8N7R1 296 aa8.38□□□□□ -1.07
SPTLC1-202ENST00000337841 SFRP2Q96HF1 295 aa8.38□□□□□ -1.07
SPTLC1-202ENST00000337841 ZNF479Q96JC4 524 aa8.38□□□□□ -1.07
SPTLC1-202ENST00000337841 PRO0255Q9UI72 69 aa8.38□□□□□ -1.07
SPTLC1-202ENST00000337841 TRAV26-1A0A087WT03 109 aa8.37□□□□□ -1.07
SPTLC1-202ENST00000337841 MUC21A0A0G2JKD1 596 aa8.37□□□□□ -1.07
SPTLC1-202ENST00000337841 MUC21A0A140T8X8 626 aa8.37□□□□□ -1.07
SPTLC1-202ENST00000337841 H3BNG1 76 aa8.37□□□□□ -1.07
SPTLC1-202ENST00000337841 PAX4O43316 350 aa8.37□□□□□ -1.07
SPTLC1-202ENST00000337841 ZFP2Q6ZN57 461 aa8.37□□□□□ -1.07
SPTLC1-202ENST00000337841 C15orf53Q8NAA6 179 aa8.37□□□□□ -1.07
SPTLC1-202ENST00000337841 OR10AG1Q8NH19 301 aa8.37□□□□□ -1.07
SPTLC1-202ENST00000337841 APLNQ9ULZ1 77 aa8.37□□□□□ -1.07
SPTLC1-202ENST00000337841 A0A0J9YY99 117 aa8.36□□□□□ -1.07
SPTLC1-202ENST00000337841 FAM231BA6NCW3 169 aa8.36□□□□□ -1.07
SPTLC1-202ENST00000337841 RHODO00212 210 aa8.36□□□□□ -1.07
SPTLC1-202ENST00000337841 PPP1R2P9O14990 202 aa8.36□□□□□ -1.07
SPTLC1-202ENST00000337841 FOXA3P55318 350 aaPredicted RBP8.36□□□□□ -1.07
SPTLC1-202ENST00000337841 TSKUQ8WUA8 353 aa8.36□□□□□ -1.07
SPTLC1-202ENST00000337841 BORCS7Q96B45 105 aa8.36□□□□□ -1.07
SPTLC1-202ENST00000337841 SEC11CQ9BY50 192 aa8.36□□□□□ -1.07
SPTLC1-202ENST00000337841 GFRA4Q9GZZ7 299 aa8.36□□□□□ -1.07
SPTLC1-202ENST00000337841 IGHV3-73A0A0B4J1V6 119 aa8.35□□□□□ -1.07
SPTLC1-202ENST00000337841 NXPH4O95158 308 aa8.35□□□□□ -1.07
SPTLC1-202ENST00000337841 NUDT3O95989 172 aa8.35□□□□□ -1.07
SPTLC1-202ENST00000337841 MT-ND4LP03901 98 aa8.35□□□□□ -1.07
SPTLC1-202ENST00000337841 SMIM17P0DL12 118 aa8.35□□□□□ -1.07
SPTLC1-202ENST00000337841 NTF3P20783 257 aa8.35□□□□□ -1.07
SPTLC1-202ENST00000337841 CRYBA4P53673 196 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms