RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 ASIPP42127 132 aa13.07□□□□□ -0.32
DDX28-201ENST00000332395 KRTAP1-3Q8IUG1 177 aa13.07□□□□□ -0.32
DDX28-201ENST00000332395 OR2K2Q8NGT1 345 aa13.07□□□□□ -0.32
DDX28-201ENST00000332395 CREBBPQ92793 2442 aa13.07□□□□□ -0.32
DDX28-201ENST00000332395 SYNJ2BPP57105 145 aa13.07□□□□□ -0.32
DDX28-201ENST00000332395 IGHV4OR15-8A0A075B7B6 117 aa13.06□□□□□ -0.32
DDX28-201ENST00000332395 A0A087WW49 117 aa13.06□□□□□ -0.32
DDX28-201ENST00000332395 TRAV26-2A0A0B4J265 109 aa13.06□□□□□ -0.32
DDX28-201ENST00000332395 NRACQ8N912 160 aa13.06□□□□□ -0.32
DDX28-201ENST00000332395 UBE2E2Q96LR5 201 aa13.06□□□□□ -0.32
DDX28-201ENST00000332395 H3BRM9 83 aa13.05□□□□□ -0.32
DDX28-201ENST00000332395 M0R381 172 aa13.05□□□□□ -0.32
DDX28-201ENST00000332395 IFI27L1Q96BM0 104 aa13.05□□□□□ -0.32
DDX28-201ENST00000332395 DOPEY2Q9Y3R5 2298 aa13.05□□□□□ -0.32
DDX28-201ENST00000332395 TEX15Q9BXT5 2789 aa13.05□□□□□ -0.32
DDX28-201ENST00000332395 C9orf118A6NHY6 69 aa13.05□□□□□ -0.32
DDX28-201ENST00000332395 KLLNB2CW77 178 aa13.05□□□□□ -0.32
DDX28-201ENST00000332395 SPRY2O43597 315 aa13.05□□□□□ -0.32
DDX28-201ENST00000332395 LEPP41159 167 aa13.05□□□□□ -0.32
DDX28-201ENST00000332395 LGALS9BQ3B8N2 356 aa13.05□□□□□ -0.32
DDX28-201ENST00000332395 LGALS9CQ6DKI2 356 aa13.05□□□□□ -0.32
DDX28-201ENST00000332395 GTF2H5Q6ZYL4 71 aa13.05□□□□□ -0.32
DDX28-201ENST00000332395 RNF152Q8N8N0 203 aa13.05□□□□□ -0.32
DDX28-201ENST00000332395 Q8N8P6 123 aa13.05□□□□□ -0.32
DDX28-201ENST00000332395 PHLDA3Q9Y5J5 127 aa13.05□□□□□ -0.32
DDX28-201ENST00000332395 APCP25054 2843 aa13.04□□□□□ -0.32
DDX28-201ENST00000332395 IGLV2-18A0A075B6J9 118 aa13.04□□□□□ -0.32
DDX28-201ENST00000332395 LGALS9O00182 355 aa13.04□□□□□ -0.32
DDX28-201ENST00000332395 SAP30O75446 220 aa13.04□□□□□ -0.32
DDX28-201ENST00000332395 MED14OSP0DP75 135 aa13.04□□□□□ -0.32
DDX28-201ENST00000332395 FCER1GP30273 86 aa13.04□□□□□ -0.32
DDX28-201ENST00000332395 DUX5Q96PT3 197 aa13.04□□□□□ -0.32
DDX28-201ENST00000332395 GNRH2O43555 120 aa13.04□□□□□ -0.32
DDX28-201ENST00000332395 ZNF688P0C7X2 276 aa13.04□□□□□ -0.32
DDX28-201ENST00000332395 HOXD3P31249 432 aaPredicted RBP13.04□□□□□ -0.32
DDX28-201ENST00000332395 OR1N2Q8NGR9 330 aa13.04□□□□□ -0.32
DDX28-201ENST00000332395 PSMG4Q5JS54 123 aa13.03□□□□□ -0.32
DDX28-201ENST00000332395 MRAP2Q96G30 205 aa13.03□□□□□ -0.32
DDX28-201ENST00000332395 JMJD8Q96S16 334 aa13.03□□□□□ -0.32
DDX28-201ENST00000332395 A6NDN8 102 aa13.03□□□□□ -0.32
DDX28-201ENST00000332395 PRSS47A8MTI9 375 aa13.03□□□□□ -0.32
DDX28-201ENST00000332395 RNASE3P12724 160 aaKnown RBP13.03□□□□□ -0.32
DDX28-201ENST00000332395 AP1S3Q96PC3 154 aa13.03□□□□□ -0.32
DDX28-201ENST00000332395 K7EQG2 157 aa13.02□□□□□ -0.33
DDX28-201ENST00000332395 SNRPD3P62318 126 aaKnown RBP13.02□□□□□ -0.33
DDX28-201ENST00000332395 BOD1L2Q8IYS8 172 aa13.02□□□□□ -0.33
DDX28-201ENST00000332395 WFDC12Q8WWY7 111 aa13.02□□□□□ -0.33
DDX28-201ENST00000332395 C18orf15Q96N68 181 aa13.02□□□□□ -0.33
DDX28-201ENST00000332395 ZNF469Q96JG9 3925 aaPredicted RBP13.02□□□□□ -0.33
DDX28-201ENST00000332395 K7EP34 96 aa13.01□□□□□ -0.33
DDX28-201ENST00000332395 Q8N2B8 174 aa13.01□□□□□ -0.33
DDX28-201ENST00000332395 NBPF19A0A087WUL8 3843 aa13.01□□□□□ -0.33
DDX28-201ENST00000332395 G3V4G9 280 aa13.01□□□□□ -0.33
DDX28-201ENST00000332395 TMEM158Q8WZ71 300 aa13.01□□□□□ -0.33
DDX28-201ENST00000332395 DPH3P1Q9H4G8 78 aa13.01□□□□□ -0.33
DDX28-201ENST00000332395 HSD52Q0P140 79 aa13□□□□□ -0.33
DDX28-201ENST00000332395 C14orf178Q8N769 122 aaPredicted RBP13□□□□□ -0.33
DDX28-201ENST00000332395 A0A0J9YX75 114 aa13□□□□□ -0.33
DDX28-201ENST00000332395 H3BUT2 72 aa13□□□□□ -0.33
DDX28-201ENST00000332395 SIVA1O15304 175 aa13□□□□□ -0.33
DDX28-201ENST00000332395 FAM159AQ6UWV7 190 aa13□□□□□ -0.33
DDX28-201ENST00000332395 OR9G4Q8NGQ1 327 aa13□□□□□ -0.33
DDX28-201ENST00000332395 ODF3Q96PU9 254 aa13□□□□□ -0.33
DDX28-201ENST00000332395 TMEM238C9JI98 176 aa12.99□□□□□ -0.33
DDX28-201ENST00000332395 RIPPLY3P57055 190 aa12.99□□□□□ -0.33
DDX28-201ENST00000332395 TRAV12-3A0A0B4J271 114 aa12.98□□□□□ -0.33
DDX28-201ENST00000332395 LAGE3Q14657 143 aa12.98□□□□□ -0.33
DDX28-201ENST00000332395 C18orf65Q6ZTR6 163 aa12.98□□□□□ -0.33
DDX28-201ENST00000332395 DEFB136Q30KP8 78 aa12.98□□□□□ -0.33
DDX28-201ENST00000332395 ADAMTSL5Q6ZMM2 481 aa12.98□□□□□ -0.33
DDX28-201ENST00000332395 NEGR1Q7Z3B1 354 aa12.98□□□□□ -0.33
DDX28-201ENST00000332395 WFDC11Q8NEX6 87 aa12.98□□□□□ -0.33
DDX28-201ENST00000332395 NXPH4O95158 308 aa12.97□□□□□ -0.33
DDX28-201ENST00000332395 DKK2Q9UBU2 259 aa12.97□□□□□ -0.33
DDX28-201ENST00000332395 IGKV3-20P01619 116 aa12.97□□□□□ -0.33
DDX28-201ENST00000332395 SLURP1P55000 103 aa12.97□□□□□ -0.33
DDX28-201ENST00000332395 RASL10AQ92737 203 aa12.97□□□□□ -0.33
DDX28-201ENST00000332395 SMIM2Q9BVW6 85 aa12.97□□□□□ -0.33
DDX28-201ENST00000332395 MGPP08493 103 aa12.96□□□□□ -0.33
DDX28-201ENST00000332395 SMIM17P0DL12 118 aa12.96□□□□□ -0.33
DDX28-201ENST00000332395 TCTEX1D4Q5JR98 221 aa12.96□□□□□ -0.33
DDX28-201ENST00000332395 CD7P09564 240 aa12.96□□□□□ -0.34
DDX28-201ENST00000332395 SUMO2P61956 95 aaKnown RBP12.96□□□□□ -0.34
DDX28-201ENST00000332395 OR5A1Q8NGJ0 315 aa12.96□□□□□ -0.34
DDX28-201ENST00000332395 NAA38Q9BRA0 125 aaKnown RBP12.96□□□□□ -0.34
DDX28-201ENST00000332395 MUC4Q99102 2169 aa12.95□□□□□ -0.34
DDX28-201ENST00000332395 ITPR3Q14573 2671 aa12.95□□□□□ -0.34
DDX28-201ENST00000332395 TENM4Q6N022 2769 aa12.95□□□□□ -0.34
DDX28-201ENST00000332395 TRAV12-2A0A075B6T6 113 aa12.95□□□□□ -0.34
DDX28-201ENST00000332395 PRSS1P07477 247 aa12.95□□□□□ -0.34
DDX28-201ENST00000332395 ODF1Q14990 250 aa12.95□□□□□ -0.34
DDX28-201ENST00000332395 RPL39LQ96EH5 51 aaKnown RBP12.95□□□□□ -0.34
DDX28-201ENST00000332395 HIST2H2BCQ6DN03 193 aa12.94□□□□□ -0.34
DDX28-201ENST00000332395 C20orf78Q9BR46 151 aa12.94□□□□□ -0.34
DDX28-201ENST00000332395 A0A1W2PPM0 123 aa12.94□□□□□ -0.34
DDX28-201ENST00000332395 ATP5LO75964 103 aa12.94□□□□□ -0.34
DDX28-201ENST00000332395 TMEM86BQ8N661 226 aa12.94□□□□□ -0.34
DDX28-201ENST00000332395 LINC01619G3V211 115 aa12.93□□□□□ -0.34
DDX28-201ENST00000332395 DUSP14O95147 198 aaKnown RBP12.93□□□□□ -0.34
DDX28-201ENST00000332395 SPINK13Q1W4C9 94 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms