RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 TRAV12-1A0A0B4J245 112 aa11.62□□□□□ -0.55
BRCC3-201ENST00000330045 IGHV4-61A0A0C4DH41 118 aa11.62□□□□□ -0.55
BRCC3-201ENST00000330045 H7C1H1 209 aa11.62□□□□□ -0.55
BRCC3-201ENST00000330045 IGHV3-11P01762 117 aa11.62□□□□□ -0.55
BRCC3-201ENST00000330045 LY6EQ16553 131 aa11.62□□□□□ -0.55
BRCC3-201ENST00000330045 ANXA2RQ3ZCQ2 193 aa11.62□□□□□ -0.55
BRCC3-201ENST00000330045 C14orf178Q8N769 122 aaPredicted RBP11.62□□□□□ -0.55
BRCC3-201ENST00000330045 C20orf78Q9BR46 151 aa11.62□□□□□ -0.55
BRCC3-201ENST00000330045 KLK15Q9H2R5 256 aa11.62□□□□□ -0.55
BRCC3-201ENST00000330045 ANKRD17O75179 2603 aaKnown RBP11.62□□□□□ -0.55
BRCC3-201ENST00000330045 F8VRH5 84 aa11.61□□□□□ -0.55
BRCC3-201ENST00000330045 RNASE4P34096 147 aaKnown RBP11.61□□□□□ -0.55
BRCC3-201ENST00000330045 TOMM6Q96B49 74 aa11.61□□□□□ -0.55
BRCC3-201ENST00000330045 SCGB3A1Q96QR1 104 aa11.61□□□□□ -0.55
BRCC3-201ENST00000330045 ZNF469Q96JG9 3925 aaPredicted RBP11.61□□□□□ -0.55
BRCC3-201ENST00000330045 F6UB75 175 aa11.61□□□□□ -0.55
BRCC3-201ENST00000330045 H3BUA1 57 aa11.61□□□□□ -0.55
BRCC3-201ENST00000330045 K7ERJ3 54 aa11.61□□□□□ -0.55
BRCC3-201ENST00000330045 IGHG2P01859 326 aa11.61□□□□□ -0.55
BRCC3-201ENST00000330045 SLC25A16P16260 332 aa11.61□□□□□ -0.55
BRCC3-201ENST00000330045 PHLDA1Q8WV24 401 aaPredicted RBP11.61□□□□□ -0.55
BRCC3-201ENST00000330045 RPL39LQ96EH5 51 aaKnown RBP11.61□□□□□ -0.55
BRCC3-201ENST00000330045 FAM19A4Q96LR4 140 aa11.61□□□□□ -0.55
BRCC3-201ENST00000330045 NHP2Q9NX24 153 aaKnown RBP11.61□□□□□ -0.55
BRCC3-201ENST00000330045 IGKV3-7A0A075B6H7 116 aa11.6□□□□□ -0.55
BRCC3-201ENST00000330045 IGHV4-30-2A0A087WSY4 118 aa11.6□□□□□ -0.55
BRCC3-201ENST00000330045 BRI3O95415 125 aa11.6□□□□□ -0.55
BRCC3-201ENST00000330045 MED14OSP0DP75 135 aa11.6□□□□□ -0.55
BRCC3-201ENST00000330045 K7EMI3 77 aa11.6□□□□□ -0.55
BRCC3-201ENST00000330045 MGPP08493 103 aa11.6□□□□□ -0.55
BRCC3-201ENST00000330045 IGHV4-38-2P0DP08 117 aa11.6□□□□□ -0.55
BRCC3-201ENST00000330045 PF4V1P10720 104 aa11.6□□□□□ -0.55
BRCC3-201ENST00000330045 ATP5J2P56134 94 aa11.6□□□□□ -0.55
BRCC3-201ENST00000330045 CHTOPQ9Y3Y2 248 aaKnown RBP11.6□□□□□ -0.55
BRCC3-201ENST00000330045 H3BUX3 64 aa11.59□□□□□ -0.55
BRCC3-201ENST00000330045 GNRH2O43555 120 aa11.59□□□□□ -0.55
BRCC3-201ENST00000330045 TAL2Q16559 108 aa11.59□□□□□ -0.55
BRCC3-201ENST00000330045 NEGR1Q7Z3B1 354 aa11.59□□□□□ -0.55
BRCC3-201ENST00000330045 PIMREGQ9BSJ6 248 aa11.59□□□□□ -0.55
BRCC3-201ENST00000330045 KRTAP10-9P60411 292 aa11.59□□□□□ -0.55
BRCC3-201ENST00000330045 COTL1Q14019 142 aa11.59□□□□□ -0.55
BRCC3-201ENST00000330045 APRG1Q8IVJ8 170 aa11.59□□□□□ -0.55
BRCC3-201ENST00000330045 RHPN1-AS1Q9BWJ2 59 aa11.59□□□□□ -0.55
BRCC3-201ENST00000330045 KMT2BQ9UMN6 2715 aaPredicted RBP11.58□□□□□ -0.56
BRCC3-201ENST00000330045 NEXN-AS1Q8NBZ9 246 aa11.58□□□□□ -0.56
BRCC3-201ENST00000330045 SPOCK3Q9BQ16 436 aa11.58□□□□□ -0.56
BRCC3-201ENST00000330045 TRBV7-9A0A0J9YWB2 115 aa11.58□□□□□ -0.56
BRCC3-201ENST00000330045 A6NDX4 124 aa11.58□□□□□ -0.56
BRCC3-201ENST00000330045 RNF223E7ERA6 249 aa11.58□□□□□ -0.56
BRCC3-201ENST00000330045 G3V4G9 280 aa11.58□□□□□ -0.56
BRCC3-201ENST00000330045 RNASE3P12724 160 aaKnown RBP11.58□□□□□ -0.56
BRCC3-201ENST00000330045 BLCAPP62952 87 aa11.58□□□□□ -0.56
BRCC3-201ENST00000330045 C2orf66Q6UXQ4 117 aa11.57□□□□□ -0.56
BRCC3-201ENST00000330045 LCNL1Q6ZST4 164 aa11.57□□□□□ -0.56
BRCC3-201ENST00000330045 C10orf105Q8TEF2 133 aa11.57□□□□□ -0.56
BRCC3-201ENST00000330045 APCP25054 2843 aa11.57□□□□□ -0.56
BRCC3-201ENST00000330045 HIST1H4GQ99525 98 aa11.57□□□□□ -0.56
BRCC3-201ENST00000330045 OR11H12B2RN74 326 aa11.56□□□□□ -0.56
BRCC3-201ENST00000330045 PPP1R17O96001 155 aa11.56□□□□□ -0.56
BRCC3-201ENST00000330045 Q6ZS46 218 aa11.56□□□□□ -0.56
BRCC3-201ENST00000330045 OR11H1Q8NG94 326 aa11.56□□□□□ -0.56
BRCC3-201ENST00000330045 OR11H2Q8NH07 326 aa11.56□□□□□ -0.56
BRCC3-201ENST00000330045 BAALCQ8WXS3 180 aa11.55□□□□□ -0.56
BRCC3-201ENST00000330045 CSTL1Q9H114 145 aa11.55□□□□□ -0.56
BRCC3-201ENST00000330045 DAZ1Q9NQZ3 744 aaKnown RBP11.55□□□□□ -0.56
BRCC3-201ENST00000330045 DOPEY2Q9Y3R5 2298 aa11.55□□□□□ -0.56
BRCC3-201ENST00000330045 MYMXA0A1B0GTQ4 84 aa11.55□□□□□ -0.56
BRCC3-201ENST00000330045 NAV2Q8IVL1 2488 aa11.55□□□□□ -0.56
BRCC3-201ENST00000330045 IGLL5B9A064 214 aa11.54□□□□□ -0.56
BRCC3-201ENST00000330045 IGLV1-40P01703 118 aa11.54□□□□□ -0.56
BRCC3-201ENST00000330045 SRD5A1P18405 259 aa11.54□□□□□ -0.56
BRCC3-201ENST00000330045 C12orf74Q32Q52 190 aa11.54□□□□□ -0.56
BRCC3-201ENST00000330045 E9PLD3 99 aa11.54□□□□□ -0.56
BRCC3-201ENST00000330045 HIST2H2BCQ6DN03 193 aa11.54□□□□□ -0.56
BRCC3-201ENST00000330045 MAPK1IP1LQ8NDC0 245 aa11.54□□□□□ -0.56
BRCC3-201ENST00000330045 POM121L12Q8N7R1 296 aa11.53□□□□□ -0.56
BRCC3-201ENST00000330045 HELZ2Q9BYK8 2649 aaKnown RBP11.53□□□□□ -0.56
BRCC3-201ENST00000330045 TRBV7-3A0A075B6L6 115 aa11.53□□□□□ -0.56
BRCC3-201ENST00000330045 PRSS29PA6NIE9 313 aa11.53□□□□□ -0.56
BRCC3-201ENST00000330045 NXPH4O95158 308 aa11.53□□□□□ -0.56
BRCC3-201ENST00000330045 COX6B1P14854 86 aa11.53□□□□□ -0.56
BRCC3-201ENST00000330045 CLEC2AQ6UVW9 174 aa11.53□□□□□ -0.56
BRCC3-201ENST00000330045 CSPG4Q6UVK1 2322 aa11.53□□□□□ -0.56
BRCC3-201ENST00000330045 KLLNB2CW77 178 aa11.52□□□□□ -0.56
BRCC3-201ENST00000330045 LINC01619G3V211 115 aa11.52□□□□□ -0.56
BRCC3-201ENST00000330045 NDUFS8O00217 210 aa11.52□□□□□ -0.56
BRCC3-201ENST00000330045 RIPPLY3P57055 190 aa11.52□□□□□ -0.56
BRCC3-201ENST00000330045 FAM159AQ6UWV7 190 aa11.52□□□□□ -0.56
BRCC3-201ENST00000330045 ZNF479Q96JC4 524 aa11.52□□□□□ -0.56
BRCC3-201ENST00000330045 KIF25-AS1Q9Y6Z4 181 aa11.52□□□□□ -0.56
BRCC3-201ENST00000330045 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.52□□□□□ -0.566e-8■■■■■ 27.8
BRCC3-201ENST00000330045 AGRNO00468 2067 aa11.52□□□□□ -0.57
BRCC3-201ENST00000330045 LINC00315P59091 139 aa11.52□□□□□ -0.57
BRCC3-201ENST00000330045 EDN2P20800 178 aa11.51□□□□□ -0.57
BRCC3-201ENST00000330045 ID1P41134 155 aa11.51□□□□□ -0.57
BRCC3-201ENST00000330045 FOXI2Q6ZQN5 318 aa11.51□□□□□ -0.57
BRCC3-201ENST00000330045 K7EMT4 169 aa11.51□□□□□ -0.57
BRCC3-201ENST00000330045 PRADC1Q9BSG0 188 aa11.51□□□□□ -0.57
BRCC3-201ENST00000330045 MUC4Q99102 2169 aa11.51□□□□□ -0.57
BRCC3-201ENST00000330045 IGHV4OR15-8A0A075B7B6 117 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms