RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 CRYGCP07315 174 aa13.37□□□□□ -0.27
GABRB3-202ENST00000311550 SPINK8P0C7L1 97 aa13.37□□□□□ -0.27
GABRB3-202ENST00000311550 YPEL4Q96NS1 127 aa13.37□□□□□ -0.27
GABRB3-202ENST00000311550 PLXNB1O43157 2135 aa13.37□□□□□ -0.27
GABRB3-202ENST00000311550 DEFB1P60022 68 aa13.37□□□□□ -0.27
GABRB3-202ENST00000311550 SCRT2Q9NQ03 307 aa13.37□□□□□ -0.27
GABRB3-202ENST00000311550 K7EMI3 77 aa13.36□□□□□ -0.27
GABRB3-202ENST00000311550 MRPL53Q96EL3 112 aaKnown RBP13.36□□□□□ -0.27
GABRB3-202ENST00000311550 PIEZO2Q9H5I5 2752 aa13.36□□□□□ -0.27
GABRB3-202ENST00000311550 AZU1P20160 251 aa13.36□□□□□ -0.27
GABRB3-202ENST00000311550 DPH3Q96FX2 82 aa13.36□□□□□ -0.27
GABRB3-202ENST00000311550 CSPG4Q6UVK1 2322 aa13.36□□□□□ -0.27
GABRB3-202ENST00000311550 VWC2LB2RUY7 222 aa13.36□□□□□ -0.27
GABRB3-202ENST00000311550 J3QQQ9 107 aa13.36□□□□□ -0.27
GABRB3-202ENST00000311550 C12orf74Q32Q52 190 aa13.36□□□□□ -0.27
GABRB3-202ENST00000311550 C1QTNF4Q9BXJ3 329 aa13.36□□□□□ -0.27
GABRB3-202ENST00000311550 DEFB136Q30KP8 78 aa13.35□□□□□ -0.27
GABRB3-202ENST00000311550 S100A7L2Q5SY68 101 aa13.35□□□□□ -0.27
GABRB3-202ENST00000311550 C19orf71A6NCJ1 209 aa13.35□□□□□ -0.27
GABRB3-202ENST00000311550 LEPROTO15243 131 aa13.35□□□□□ -0.27
GABRB3-202ENST00000311550 TRBV25-1A0A075B6N4 114 aa13.35□□□□□ -0.27
GABRB3-202ENST00000311550 AJUBAQ96IF1 538 aa13.35□□□□□ -0.27
GABRB3-202ENST00000311550 NDUFA12Q9UI09 145 aa13.35□□□□□ -0.27
GABRB3-202ENST00000311550 DAZAP2Q15038 168 aaPredicted RBP13.34□□□□□ -0.27
GABRB3-202ENST00000311550 GDF5OSQ5U4N7 250 aa13.34□□□□□ -0.27
GABRB3-202ENST00000311550 ZNF493Q6ZR52 646 aa13.34□□□□□ -0.27
GABRB3-202ENST00000311550 FANCD2OSQ96PS1 177 aa13.34□□□□□ -0.27
GABRB3-202ENST00000311550 CACNA1AO00555 2505 aa13.34□□□□□ -0.27
GABRB3-202ENST00000311550 IGHV4-30-2A0A087WSY4 118 aa13.34□□□□□ -0.27
GABRB3-202ENST00000311550 FGF6P10767 208 aa13.34□□□□□ -0.27
GABRB3-202ENST00000311550 SLC25A20O43772 301 aa13.34□□□□□ -0.27
GABRB3-202ENST00000311550 LENEPQ9Y5L5 61 aa13.34□□□□□ -0.27
GABRB3-202ENST00000311550 GAGE7O76087 117 aa13.34□□□□□ -0.27
GABRB3-202ENST00000311550 GAGE12FP0CL80 117 aa13.34□□□□□ -0.27
GABRB3-202ENST00000311550 GAGE12GP0CL81 117 aa13.34□□□□□ -0.27
GABRB3-202ENST00000311550 GAGE12IP0CL82 117 aa13.34□□□□□ -0.27
GABRB3-202ENST00000311550 H3BUA1 57 aa13.33□□□□□ -0.28
GABRB3-202ENST00000311550 PTPRSQ13332 1948 aa13.33□□□□□ -0.28
GABRB3-202ENST00000311550 F8W1H4 67 aa13.33□□□□□ -0.28
GABRB3-202ENST00000311550 HOXD3P31249 432 aaPredicted RBP13.33□□□□□ -0.28
GABRB3-202ENST00000311550 LINC00574Q9H8X3 128 aa13.33□□□□□ -0.28
GABRB3-202ENST00000311550 C5orf56Q8N8D9 126 aa13.33□□□□□ -0.28
GABRB3-202ENST00000311550 TAL2Q16559 108 aa13.32□□□□□ -0.28
GABRB3-202ENST00000311550 PRO1854Q9UHT4 67 aa13.32□□□□□ -0.28
GABRB3-202ENST00000311550 JPT2Q9H910 190 aa13.32□□□□□ -0.28
GABRB3-202ENST00000311550 C16orf54Q6UWD8 224 aa13.32□□□□□ -0.28
GABRB3-202ENST00000311550 TRBV20-1A0A075B6N2 111 aa13.31□□□□□ -0.28
GABRB3-202ENST00000311550 ELANEP08246 267 aa13.31□□□□□ -0.28
GABRB3-202ENST00000311550 ATP6V0BQ99437 205 aa13.31□□□□□ -0.28
GABRB3-202ENST00000311550 NRGNQ92686 78 aa13.3□□□□□ -0.28
GABRB3-202ENST00000311550 C2orf70A6NJV1 201 aa13.3□□□□□ -0.28
GABRB3-202ENST00000311550 LOXL1Q08397 574 aaPredicted RBP13.3□□□□□ -0.28
GABRB3-202ENST00000311550 CEP192Q8TEP8 1941 aa13.3□□□□□ -0.28
GABRB3-202ENST00000311550 A0A1B0GXF2 115 aa13.3□□□□□ -0.28
GABRB3-202ENST00000311550 PFN2P35080 140 aa13.3□□□□□ -0.28
GABRB3-202ENST00000311550 SUMO4Q6EEV6 95 aa13.3□□□□□ -0.28
GABRB3-202ENST00000311550 NACAE9PAV3 2078 aa13.29□□□□□ -0.28
GABRB3-202ENST00000311550 J3QLI3 93 aa13.29□□□□□ -0.28
GABRB3-202ENST00000311550 KIAA1549Q9HCM3 1950 aa13.29□□□□□ -0.28
GABRB3-202ENST00000311550 GAGE6Q13070 117 aa13.29□□□□□ -0.28
GABRB3-202ENST00000311550 NOTCH2Q04721 2471 aa13.29□□□□□ -0.28
GABRB3-202ENST00000311550 FOXI2Q6ZQN5 318 aa13.28□□□□□ -0.28
GABRB3-202ENST00000311550 PRO3102Q9H379 93 aa13.28□□□□□ -0.28
GABRB3-202ENST00000311550 CEP350Q5VT06 3117 aa13.28□□□□□ -0.28
GABRB3-202ENST00000311550 TNRC6AQ8NDV7 1962 aaKnown RBP13.28□□□□□ -0.28
GABRB3-202ENST00000311550 CTRLP40313 264 aa13.28□□□□□ -0.28
GABRB3-202ENST00000311550 ZNF80P51504 273 aaPredicted RBP13.28□□□□□ -0.28
GABRB3-202ENST00000311550 VPREB3Q9UKI3 123 aa13.28□□□□□ -0.28
GABRB3-202ENST00000311550 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.28□□□□□ -0.28
GABRB3-202ENST00000311550 IGKV2-29A2NJV5 120 aaPredicted RBP13.28□□□□□ -0.28
GABRB3-202ENST00000311550 FXYD2P54710 66 aa13.28□□□□□ -0.28
GABRB3-202ENST00000311550 PPDPFLQ8WWR9 84 aa13.28□□□□□ -0.28
GABRB3-202ENST00000311550 TANC2Q9HCD6 1990 aa13.28□□□□□ -0.28
GABRB3-202ENST00000311550 TP73-AS1Q9UF72 201 aa13.27□□□□□ -0.28
GABRB3-202ENST00000311550 TP53TG3Q9ULZ0 132 aa13.27□□□□□ -0.28
GABRB3-202ENST00000311550 TAX1BP3O14907 124 aa13.27□□□□□ -0.29
GABRB3-202ENST00000311550 SLURP1P55000 103 aa13.27□□□□□ -0.29
GABRB3-202ENST00000311550 SS18Q15532 418 aa13.27□□□□□ -0.29
GABRB3-202ENST00000311550 H3BMM0 161 aa13.27□□□□□ -0.29
GABRB3-202ENST00000311550 TRBV12-3P01733 135 aa13.27□□□□□ -0.29
GABRB3-202ENST00000311550 GAGE2AQ6NT46 116 aa13.27□□□□□ -0.29
GABRB3-202ENST00000311550 APRG1Q8IVJ8 170 aa13.27□□□□□ -0.29
GABRB3-202ENST00000311550 UBE2WQ96B02 151 aa13.27□□□□□ -0.29
GABRB3-202ENST00000311550 UNQ9165/PRO28630Q6UXU0 137 aa13.26□□□□□ -0.29
GABRB3-202ENST00000311550 RNASE8Q8TDE3 154 aaKnown RBP13.26□□□□□ -0.29
GABRB3-202ENST00000311550 SIRPDQ9H106 197 aa13.26□□□□□ -0.29
GABRB3-202ENST00000311550 LGALS1P09382 135 aaKnown RBP13.26□□□□□ -0.29
GABRB3-202ENST00000311550 LINC01548A6NM66 108 aa13.26□□□□□ -0.29
GABRB3-202ENST00000311550 MLST8Q9BVC4 326 aa13.26□□□□□ -0.29
GABRB3-202ENST00000311550 RPL39P62891 51 aaKnown RBP13.26□□□□□ -0.29
GABRB3-202ENST00000311550 TMEM243Q9BU79 118 aa13.26□□□□□ -0.29
GABRB3-202ENST00000311550 C9orf47Q6ZRZ4 202 aa13.25□□□□□ -0.29
GABRB3-202ENST00000311550 GAGE12HA6NDE8 117 aa13.25□□□□□ -0.29
GABRB3-202ENST00000311550 ZFP2Q6ZN57 461 aa13.25□□□□□ -0.29
GABRB3-202ENST00000311550 HIST1H4AP62805 103 aaKnown RBP13.25□□□□□ -0.29
GABRB3-202ENST00000311550 TRBV6-1A0A0K0K1D8 114 aa13.24□□□□□ -0.29
GABRB3-202ENST00000311550 SH2D6Q7Z4S9 175 aa13.24□□□□□ -0.29
GABRB3-202ENST00000311550 U3KQE9 123 aa13.24□□□□□ -0.29
GABRB3-202ENST00000311550 WNK1Q9H4A3 2382 aa13.24□□□□□ -0.29
GABRB3-202ENST00000311550 IGLL5B9A064 214 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms