RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 KNCNA6PVL3 124 aa15.78■□□□□ 0.12
ATG4D-201ENST00000309469 NPYP01303 97 aa15.78■□□□□ 0.12
ATG4D-201ENST00000309469 RNASE3P12724 160 aaKnown RBP15.78■□□□□ 0.12
ATG4D-201ENST00000309469 IFI27P40305 119 aaPredicted RBP15.78■□□□□ 0.12
ATG4D-201ENST00000309469 SPINK13Q1W4C9 94 aa15.78■□□□□ 0.12
ATG4D-201ENST00000309469 C2orf88Q9BSF0 95 aa15.78■□□□□ 0.12
ATG4D-201ENST00000309469 SIGLEC8Q9NYZ4 499 aa15.78■□□□□ 0.12
ATG4D-201ENST00000309469 PHLDA3Q9Y5J5 127 aa15.78■□□□□ 0.12
ATG4D-201ENST00000309469 HIVEP2P31629 2446 aa15.78■□□□□ 0.12
ATG4D-201ENST00000309469 LEPROTL1O95214 131 aa15.77■□□□□ 0.12
ATG4D-201ENST00000309469 SPAG8Q99932 426 aaPredicted RBP15.77■□□□□ 0.12
ATG4D-201ENST00000309469 PAM16Q9Y3D7 125 aa15.77■□□□□ 0.12
ATG4D-201ENST00000309469 MTORP42345 2549 aa15.77■□□□□ 0.11
ATG4D-201ENST00000309469 TRAV25A0A0B4J276 109 aa15.76■□□□□ 0.11
ATG4D-201ENST00000309469 M0R381 172 aa15.76■□□□□ 0.11
ATG4D-201ENST00000309469 SPRY2O43597 315 aa15.76■□□□□ 0.11
ATG4D-201ENST00000309469 OR4C46A6NHA9 309 aa15.76■□□□□ 0.11
ATG4D-201ENST00000309469 HLA-DRB4P13762 266 aa15.76■□□□□ 0.11
ATG4D-201ENST00000309469 MAP6D1Q9H9H5 199 aa15.76■□□□□ 0.11
ATG4D-201ENST00000309469 LAMTOR2Q9Y2Q5 125 aa15.76■□□□□ 0.11
ATG4D-201ENST00000309469 HLA-DRB4X5D2U9 266 aa15.76■□□□□ 0.11
ATG4D-201ENST00000309469 TCF21O43680 179 aa15.75■□□□□ 0.11
ATG4D-201ENST00000309469 GAS8-AS1O95177 125 aa15.75■□□□□ 0.11
ATG4D-201ENST00000309469 FOSL1P15407 271 aa15.75■□□□□ 0.11
ATG4D-201ENST00000309469 C20orf144Q9BQM9 153 aa15.75■□□□□ 0.11
ATG4D-201ENST00000309469 TMEM70Q9BUB7 260 aa15.75■□□□□ 0.11
ATG4D-201ENST00000309469 A8MTW9 85 aa15.74■□□□□ 0.11
ATG4D-201ENST00000309469 H3BMM0 161 aa15.74■□□□□ 0.11
ATG4D-201ENST00000309469 ZNF256Q9Y2P7 627 aaPredicted RBP15.74■□□□□ 0.11
ATG4D-201ENST00000309469 ADARB2-AS1A8MUL3 147 aa15.74■□□□□ 0.11
ATG4D-201ENST00000309469 CD7P09564 240 aa15.74■□□□□ 0.11
ATG4D-201ENST00000309469 NOTCH2Q04721 2471 aa15.73■□□□□ 0.11
ATG4D-201ENST00000309469 ZNF124Q15973 351 aa15.73■□□□□ 0.11
ATG4D-201ENST00000309469 LINC00173Q6ZV60 143 aa15.73■□□□□ 0.11
ATG4D-201ENST00000309469 TNFRSF6BO95407 300 aa15.72■□□□□ 0.11
ATG4D-201ENST00000309469 MAP1LC3AQ9H492 121 aa15.72■□□□□ 0.11
ATG4D-201ENST00000309469 HSPB8Q9UJY1 196 aa15.72■□□□□ 0.11
ATG4D-201ENST00000309469 GATA1P15976 413 aaPredicted RBP15.72■□□□□ 0.11
ATG4D-201ENST00000309469 IGHV1OR15-1A0A075B7D0 117 aa15.71■□□□□ 0.11
ATG4D-201ENST00000309469 CRXO43186 299 aaPredicted RBP15.71■□□□□ 0.11
ATG4D-201ENST00000309469 NXPH4O95158 308 aa15.71■□□□□ 0.11
ATG4D-201ENST00000309469 NSUN5P1Q3KNT7 163 aa15.71■□□□□ 0.11
ATG4D-201ENST00000309469 SYS1-DBNDD2H3BUS1 97 aa15.7■□□□□ 0.1
ATG4D-201ENST00000309469 FXYD7P58549 80 aa15.7■□□□□ 0.1
ATG4D-201ENST00000309469 OR2K2Q8NGT1 345 aa15.7■□□□□ 0.1
ATG4D-201ENST00000309469 IGHV3-16A0A0C4DH30 117 aa15.7■□□□□ 0.1
ATG4D-201ENST00000309469 RBMY1BA6NDE4 496 aaKnown RBP15.7■□□□□ 0.1
ATG4D-201ENST00000309469 RBMY1EA6NEQ0 496 aaKnown RBP15.7■□□□□ 0.1
ATG4D-201ENST00000309469 RBMY1DP0C7P1 496 aaKnown RBP15.7■□□□□ 0.1
ATG4D-201ENST00000309469 SPATA45Q537H7 98 aa15.7■□□□□ 0.1
ATG4D-201ENST00000309469 SPATA12Q7Z6I5 190 aa15.7■□□□□ 0.1
ATG4D-201ENST00000309469 MAP1LC3CQ9BXW4 147 aa15.7■□□□□ 0.1
ATG4D-201ENST00000309469 DPH3P1Q9H4G8 78 aa15.7■□□□□ 0.1
ATG4D-201ENST00000309469 ATOH7Q8N100 152 aa15.69■□□□□ 0.1
ATG4D-201ENST00000309469 C14orf178Q8N769 122 aaPredicted RBP15.69■□□□□ 0.1
ATG4D-201ENST00000309469 MRAP2Q96G30 205 aa15.69■□□□□ 0.1
ATG4D-201ENST00000309469 TRAV26-2A0A0B4J265 109 aa15.68■□□□□ 0.1
ATG4D-201ENST00000309469 KRTAP10-3P60369 221 aa15.68■□□□□ 0.1
ATG4D-201ENST00000309469 Q8N1Y9 231 aa15.68■□□□□ 0.1
ATG4D-201ENST00000309469 MRPL52Q86TS9 123 aaKnown RBP15.68■□□□□ 0.1
ATG4D-201ENST00000309469 NRACQ8N912 160 aa15.68■□□□□ 0.1
ATG4D-201ENST00000309469 C9orf85Q96MD7 179 aa15.68■□□□□ 0.1
ATG4D-201ENST00000309469 AP1S3Q96PC3 154 aa15.68■□□□□ 0.1
ATG4D-201ENST00000309469 MDFICQ9P1T7 246 aa15.68■□□□□ 0.1
ATG4D-201ENST00000309469 C20orf202A1L168 122 aa15.67■□□□□ 0.1
ATG4D-201ENST00000309469 ODF3L2Q3SX64 289 aa15.67■□□□□ 0.1
ATG4D-201ENST00000309469 MIEN1Q9BRT3 115 aa15.67■□□□□ 0.1
ATG4D-201ENST00000309469 A0A096LNJ9 63 aa15.66■□□□□ 0.1
ATG4D-201ENST00000309469 SAP30O75446 220 aa15.66■□□□□ 0.1
ATG4D-201ENST00000309469 RBMY1A1P0DJD3 496 aaKnown RBP15.66■□□□□ 0.1
ATG4D-201ENST00000309469 RBMY1CP0DJD4 496 aa15.66■□□□□ 0.1
ATG4D-201ENST00000309469 RBMY1FQ15415 496 aaKnown RBP15.66■□□□□ 0.1
ATG4D-201ENST00000309469 NXT2Q9NPJ8 142 aaKnown RBP15.66■□□□□ 0.1
ATG4D-201ENST00000309469 A0A1B0GV90 55 aa15.66■□□□□ 0.1
ATG4D-201ENST00000309469 LINC01546A6NGU7 62 aa15.66■□□□□ 0.1
ATG4D-201ENST00000309469 PET117Q6UWS5 81 aa15.66■□□□□ 0.1
ATG4D-201ENST00000309469 ZNF705AQ6ZN79 300 aaPredicted RBP15.66■□□□□ 0.1
ATG4D-201ENST00000309469 NDUFA11Q86Y39 141 aa15.66■□□□□ 0.1
ATG4D-201ENST00000309469 ZNF747Q9BV97 191 aa15.66■□□□□ 0.1
ATG4D-201ENST00000309469 PRSS47A8MTI9 375 aa15.65■□□□□ 0.1
ATG4D-201ENST00000309469 DEFB125Q8N687 156 aa15.65■□□□□ 0.1
ATG4D-201ENST00000309469 AGRNO00468 2067 aa15.65■□□□□ 0.1
ATG4D-201ENST00000309469 CRLF1O75462 422 aa15.64■□□□□ 0.09
ATG4D-201ENST00000309469 TRGV11A0A075B6L2 103 aa15.64■□□□□ 0.09
ATG4D-201ENST00000309469 TRAV9-2A0A087WT02 112 aa15.64■□□□□ 0.09
ATG4D-201ENST00000309469 Q8N8P6 123 aa15.64■□□□□ 0.09
ATG4D-201ENST00000309469 CLUHP3Q96NS8 147 aa15.64■□□□□ 0.09
ATG4D-201ENST00000309469 KIF25-AS1Q9Y6Z4 181 aa15.64■□□□□ 0.09
ATG4D-201ENST00000309469 HBDP02042 147 aa15.63■□□□□ 0.09
ATG4D-201ENST00000309469 MGPP08493 103 aa15.63■□□□□ 0.09
ATG4D-201ENST00000309469 MAJINQ3KP22 176 aa15.63■□□□□ 0.09
ATG4D-201ENST00000309469 POM121L12Q8N7R1 296 aa15.63■□□□□ 0.09
ATG4D-201ENST00000309469 IGLV2-18A0A075B6J9 118 aa15.62■□□□□ 0.09
ATG4D-201ENST00000309469 OR11H12B2RN74 326 aa15.62■□□□□ 0.09
ATG4D-201ENST00000309469 SORL1Q92673 2214 aa15.62■□□□□ 0.09
ATG4D-201ENST00000309469 CBY3A6NI87 242 aa15.62■□□□□ 0.09
ATG4D-201ENST00000309469 H0Y8G0 127 aa15.62■□□□□ 0.09
ATG4D-201ENST00000309469 IGLV1-51P01701 117 aa15.62■□□□□ 0.09
ATG4D-201ENST00000309469 SMIM17P0DL12 118 aa15.62■□□□□ 0.09
ATG4D-201ENST00000309469 SYT8Q8NBV8 401 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms