RNA–Protein interactions for RNA: ENST00000308249.3

PPM1E-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPM1E, Length 6,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1E-201ENST00000308249 Q6ZR03 302 aa12.37□□□□□ -0.43
PPM1E-201ENST00000308249 TRBV10-2A0A0K0K1G8 114 aa12.37□□□□□ -0.43
PPM1E-201ENST00000308249 NCOR1P1Q9H4R4 102 aa12.37□□□□□ -0.43
PPM1E-201ENST00000308249 NOTCH3Q9UM47 2321 aa12.36□□□□□ -0.43
PPM1E-201ENST00000308249 Q8TCH9 128 aa12.36□□□□□ -0.43
PPM1E-201ENST00000308249 WI2-2373I1.2A0A1W2PRP0 233 aa12.36□□□□□ -0.43
PPM1E-201ENST00000308249 CACNA1BQ00975 2339 aa12.36□□□□□ -0.43
PPM1E-201ENST00000308249 NACAE9PAV3 2078 aa12.35□□□□□ -0.43
PPM1E-201ENST00000308249 RPL39P62891 51 aaKnown RBP12.35□□□□□ -0.43
PPM1E-201ENST00000308249 JMJD7-PLA2G4BH0Y9G9 81 aa12.35□□□□□ -0.43
PPM1E-201ENST00000308249 H3BQ85 93 aa12.35□□□□□ -0.43
PPM1E-201ENST00000308249 K7EN84 100 aa12.35□□□□□ -0.43
PPM1E-201ENST00000308249 TUBGCP6Q96RT7 1819 aa12.35□□□□□ -0.43
PPM1E-201ENST00000308249 FOXI1Q12951 378 aa12.34□□□□□ -0.43
PPM1E-201ENST00000308249 THADAQ6YHU6 1953 aa12.34□□□□□ -0.43
PPM1E-201ENST00000308249 STRCQ7RTU9 1775 aa12.34□□□□□ -0.43
PPM1E-201ENST00000308249 CACNA1EQ15878 2313 aa12.34□□□□□ -0.43
PPM1E-201ENST00000308249 SCXQ7RTU7 201 aa12.34□□□□□ -0.43
PPM1E-201ENST00000308249 BPY2O14599 106 aa12.33□□□□□ -0.44
PPM1E-201ENST00000308249 WFDC10BQ8IUB3 73 aa12.33□□□□□ -0.44
PPM1E-201ENST00000308249 SCN5AQ14524 2016 aa12.33□□□□□ -0.44
PPM1E-201ENST00000308249 COX7BP24311 80 aa12.33□□□□□ -0.44
PPM1E-201ENST00000308249 UPK3BQ9BT76 320 aa12.33□□□□□ -0.44
PPM1E-201ENST00000308249 MIR7-3HGQ8N6C7 128 aa12.33□□□□□ -0.44
PPM1E-201ENST00000308249 ARAP2Q8WZ64 1704 aa12.33□□□□□ -0.44
PPM1E-201ENST00000308249 PLCE1Q9P212 2302 aa12.33□□□□□ -0.44
PPM1E-201ENST00000308249 TRAV26-1A0A087WT03 109 aa12.32□□□□□ -0.44
PPM1E-201ENST00000308249 WFDC2Q14508 124 aa12.32□□□□□ -0.44
PPM1E-201ENST00000308249 MED12Q93074 2177 aa12.32□□□□□ -0.44
PPM1E-201ENST00000308249 RGPD3A6NKT7 1758 aaPredicted RBP12.32□□□□□ -0.44
PPM1E-201ENST00000308249 COL11A1P12107 1806 aaPredicted RBP12.32□□□□□ -0.44
PPM1E-201ENST00000308249 KIF13BQ9NQT8 1826 aa12.31□□□□□ -0.44
PPM1E-201ENST00000308249 GVINP1Q7Z2Y8 2422 aa12.31□□□□□ -0.44
PPM1E-201ENST00000308249 TMEM256-PLSCR3K7ERE1 68 aa12.31□□□□□ -0.44
PPM1E-201ENST00000308249 TEN1Q86WV5 123 aa12.31□□□□□ -0.44
PPM1E-201ENST00000308249 ATRXP46100 2492 aa12.31□□□□□ -0.44
PPM1E-201ENST00000308249 MARF1Q9Y4F3 1742 aaKnown RBP12.31□□□□□ -0.44
PPM1E-201ENST00000308249 A0A087WZ39 114 aa12.31□□□□□ -0.44
PPM1E-201ENST00000308249 H3BUA1 57 aa12.31□□□□□ -0.44
PPM1E-201ENST00000308249 TEX49A0A1B0GTD5 131 aa12.31□□□□□ -0.44
PPM1E-201ENST00000308249 AJUBAQ96IF1 538 aa12.31□□□□□ -0.44
PPM1E-201ENST00000308249 MSRB1Q9NZV6 116 aa12.31□□□□□ -0.44
PPM1E-201ENST00000308249 IGHV2-70P01814 119 aa12.3□□□□□ -0.44
PPM1E-201ENST00000308249 PDCD11Q14690 1871 aaKnown RBP12.3□□□□□ -0.44
PPM1E-201ENST00000308249 IGHV4-38-2P0DP08 117 aa12.3□□□□□ -0.44
PPM1E-201ENST00000308249 PRR15LQ9BU68 103 aa12.3□□□□□ -0.44
PPM1E-201ENST00000308249 LINC00311Q8N616 119 aa12.3□□□□□ -0.44
PPM1E-201ENST00000308249 TRBV7-3A0A075B6L6 115 aa12.29□□□□□ -0.44
PPM1E-201ENST00000308249 LINC00173Q6ZV60 143 aa12.29□□□□□ -0.44
PPM1E-201ENST00000308249 FAM19A1Q7Z5A9 133 aa12.29□□□□□ -0.44
PPM1E-201ENST00000308249 USF3Q68DE3 2245 aa12.29□□□□□ -0.44
PPM1E-201ENST00000308249 TTTY13Q9BZ97 58 aa12.29□□□□□ -0.44
PPM1E-201ENST00000308249 IL15RAQ13261 267 aa12.29□□□□□ -0.44
PPM1E-201ENST00000308249 PRSS33Q8NF86 280 aa12.29□□□□□ -0.44
PPM1E-201ENST00000308249 PHF3Q92576 2039 aaKnown RBP12.28□□□□□ -0.44
PPM1E-201ENST00000308249 LINC01545Q5VT33 79 aa12.28□□□□□ -0.44
PPM1E-201ENST00000308249 Q8N1Y9 231 aa12.28□□□□□ -0.44
PPM1E-201ENST00000308249 GBF1Q92538 1859 aa12.28□□□□□ -0.44
PPM1E-201ENST00000308249 DLEC1Q9Y238 1755 aa12.28□□□□□ -0.44
PPM1E-201ENST00000308249 IGHV2-5P01817 119 aa12.28□□□□□ -0.44
PPM1E-201ENST00000308249 BLCAPP62952 87 aa12.28□□□□□ -0.44
PPM1E-201ENST00000308249 PSME4Q14997 1843 aa12.27□□□□□ -0.44
PPM1E-201ENST00000308249 C15orf65H3BRN8 121 aa12.27□□□□□ -0.44
PPM1E-201ENST00000308249 IGHV4-30-4P0DP06 118 aa12.27□□□□□ -0.44
PPM1E-201ENST00000308249 IGHV4-31P0DP07 118 aa12.27□□□□□ -0.44
PPM1E-201ENST00000308249 LYPD6BQ8NI32 183 aa12.27□□□□□ -0.44
PPM1E-201ENST00000308249 IGKV1D-37A0A075B6S9 117 aa12.27□□□□□ -0.45
PPM1E-201ENST00000308249 DOCK6Q96HP0 2047 aa12.27□□□□□ -0.45
PPM1E-201ENST00000308249 IGKV1-17P01599 117 aa12.27□□□□□ -0.45
PPM1E-201ENST00000308249 FXYD2P54710 66 aa12.26□□□□□ -0.45
PPM1E-201ENST00000308249 FOXL2NBQ6ZUU3 175 aa12.26□□□□□ -0.45
PPM1E-201ENST00000308249 DEFB113Q30KQ7 82 aa12.26□□□□□ -0.45
PPM1E-201ENST00000308249 SPINK6Q6UWN8 80 aa12.26□□□□□ -0.45
PPM1E-201ENST00000308249 C20orf197Q8N268 126 aa12.26□□□□□ -0.45
PPM1E-201ENST00000308249 WNK2Q9Y3S1 2297 aa12.26□□□□□ -0.45
PPM1E-201ENST00000308249 SMAD5-AS1Q9Y6J3 95 aa12.26□□□□□ -0.45
PPM1E-201ENST00000308249 HEATR5AQ86XA9 2040 aa12.26□□□□□ -0.45
PPM1E-201ENST00000308249 HRCT1Q6UXD1 115 aa12.26□□□□□ -0.45
PPM1E-201ENST00000308249 SIRPDQ9H106 197 aa12.26□□□□□ -0.45
PPM1E-201ENST00000308249 KIR2DL5BA0A0G2JN68 375 aa12.25□□□□□ -0.45
PPM1E-201ENST00000308249 KIR2DL5BA0A0G2JPC4 375 aa12.25□□□□□ -0.45
PPM1E-201ENST00000308249 ZNF503-AS2A6NEH8 195 aa12.25□□□□□ -0.45
PPM1E-201ENST00000308249 KIR2DL5AQ8N109 375 aa12.25□□□□□ -0.45
PPM1E-201ENST00000308249 Q8N9W7 124 aa12.25□□□□□ -0.45
PPM1E-201ENST00000308249 CXCL5P42830 114 aa12.25□□□□□ -0.45
PPM1E-201ENST00000308249 ATAD5Q96QE3 1844 aa12.25□□□□□ -0.45
PPM1E-201ENST00000308249 ZFP36P26651 326 aaKnown RBP12.24□□□□□ -0.45
PPM1E-201ENST00000308249 CHD3Q12873 2000 aaKnown RBP12.24□□□□□ -0.45
PPM1E-201ENST00000308249 GRNP28799 593 aaKnown RBP12.24□□□□□ -0.45
PPM1E-201ENST00000308249 RNF152Q8N8N0 203 aa12.24□□□□□ -0.45
PPM1E-201ENST00000308249 Q6ZUT4 128 aa12.24□□□□□ -0.45
PPM1E-201ENST00000308249 NRGNQ92686 78 aa12.24□□□□□ -0.45
PPM1E-201ENST00000308249 PTH2Q96A98 100 aa12.24□□□□□ -0.45
PPM1E-201ENST00000308249 SERP1Q9Y6X1 66 aa12.24□□□□□ -0.45
PPM1E-201ENST00000308249 FAM240AA0A1B0GVK7 77 aa12.23□□□□□ -0.45
PPM1E-201ENST00000308249 ZNF236Q9UL36 1845 aa12.23□□□□□ -0.45
PPM1E-201ENST00000308249 CENPVL3A0A0U1RRI6 287 aa12.23□□□□□ -0.45
PPM1E-201ENST00000308249 HIST2H2BDQ6DRA6 164 aa12.23□□□□□ -0.45
PPM1E-201ENST00000308249 CDPF1Q6NVV7 123 aa12.23□□□□□ -0.45
PPM1E-201ENST00000308249 SDIM1Q6ZPB5 146 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms