RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 SOHLH1Q5JUK2 328 aa15.77■□□□□ 0.11
HOXD4-201ENST00000306324 LINC01551Q86U37 167 aa15.77■□□□□ 0.11
HOXD4-201ENST00000306324 NUDT10Q8NFP7 164 aa15.77■□□□□ 0.11
HOXD4-201ENST00000306324 NUDT11Q96G61 164 aa15.77■□□□□ 0.11
HOXD4-201ENST00000306324 C18orf15Q96N68 181 aa15.77■□□□□ 0.11
HOXD4-201ENST00000306324 TMEM241Q24JQ0 296 aa15.76■□□□□ 0.11
HOXD4-201ENST00000306324 CXCL1P09341 107 aa15.75■□□□□ 0.11
HOXD4-201ENST00000306324 PHLDA3Q9Y5J5 127 aa15.75■□□□□ 0.11
HOXD4-201ENST00000306324 GZMBP10144 247 aa15.74■□□□□ 0.11
HOXD4-201ENST00000306324 NAT8Q9UHE5 227 aa15.74■□□□□ 0.11
HOXD4-201ENST00000306324 IGHV4-4A0A075B6R2 117 aa15.73■□□□□ 0.11
HOXD4-201ENST00000306324 SFTA3P0C7M3 94 aa15.73■□□□□ 0.11
HOXD4-201ENST00000306324 HOXA5P20719 270 aa15.73■□□□□ 0.11
HOXD4-201ENST00000306324 ERVFC1-1P60608 527 aa15.73■□□□□ 0.11
HOXD4-201ENST00000306324 RPS20P60866 119 aaKnown RBP15.73■□□□□ 0.11
HOXD4-201ENST00000306324 XKRY2A2RUG3 117 aa15.72■□□□□ 0.11
HOXD4-201ENST00000306324 TMEM88Q6PEY1 159 aa15.72■□□□□ 0.11
HOXD4-201ENST00000306324 OR4C5Q8NGB2 326 aa15.72■□□□□ 0.11
HOXD4-201ENST00000306324 PTH2Q96A98 100 aa15.72■□□□□ 0.11
HOXD4-201ENST00000306324 RPP21Q9H633 154 aaKnown RBP15.72■□□□□ 0.11
HOXD4-201ENST00000306324 SCRT2Q9NQ03 307 aa15.72■□□□□ 0.11
HOXD4-201ENST00000306324 MED14OSP0DP75 135 aa15.71■□□□□ 0.11
HOXD4-201ENST00000306324 ADIRFQ15847 76 aa15.71■□□□□ 0.11
HOXD4-201ENST00000306324 POM121L12Q8N7R1 296 aa15.71■□□□□ 0.11
HOXD4-201ENST00000306324 SYT8Q8NBV8 401 aa15.71■□□□□ 0.11
HOXD4-201ENST00000306324 ZNF479Q96JC4 524 aa15.71■□□□□ 0.11
HOXD4-201ENST00000306324 TPPP3Q9BW30 176 aa15.71■□□□□ 0.11
HOXD4-201ENST00000306324 TRAV4A0A0B4J268 109 aa15.71■□□□□ 0.1
HOXD4-201ENST00000306324 M0R381 172 aa15.71■□□□□ 0.1
HOXD4-201ENST00000306324 GATCO43716 136 aaKnown RBP15.71■□□□□ 0.1
HOXD4-201ENST00000306324 RPL23P62829 140 aaKnown RBP15.71■□□□□ 0.1
HOXD4-201ENST00000306324 DMRTA1Q5VZB9 504 aa15.71■□□□□ 0.1
HOXD4-201ENST00000306324 FAM231DQ6ZW35 169 aa15.71■□□□□ 0.1
HOXD4-201ENST00000306324 NDUFAF3Q9BU61 184 aa15.71■□□□□ 0.1
HOXD4-201ENST00000306324 COMMD7Q86VX2 200 aa15.7■□□□□ 0.1
HOXD4-201ENST00000306324 FAM210BQ96KR6 192 aa15.7■□□□□ 0.1
HOXD4-201ENST00000306324 TRAV26-1A0A087WT03 109 aa15.69■□□□□ 0.1
HOXD4-201ENST00000306324 TRGV4A0A0C4DH28 118 aa15.69■□□□□ 0.1
HOXD4-201ENST00000306324 MUC21A0A0G2JKD1 596 aa15.69■□□□□ 0.1
HOXD4-201ENST00000306324 MUC21A0A140T8X8 626 aa15.69■□□□□ 0.1
HOXD4-201ENST00000306324 UQCC3Q6UW78 93 aa15.69■□□□□ 0.1
HOXD4-201ENST00000306324 ZFP82Q8N141 532 aa15.69■□□□□ 0.1
HOXD4-201ENST00000306324 FER1L6-AS1Q8NA97 138 aa15.69■□□□□ 0.1
HOXD4-201ENST00000306324 OR10AG1Q8NH19 301 aa15.69■□□□□ 0.1
HOXD4-201ENST00000306324 A0A0J9YY99 117 aa15.68■□□□□ 0.1
HOXD4-201ENST00000306324 SNAI2O43623 268 aa15.68■□□□□ 0.1
HOXD4-201ENST00000306324 OR5AL1P0C617 328 aa15.68■□□□□ 0.1
HOXD4-201ENST00000306324 TCTAP57738 103 aa15.68■□□□□ 0.1
HOXD4-201ENST00000306324 SSTP61278 116 aa15.68■□□□□ 0.1
HOXD4-201ENST00000306324 CFAP126Q5VTH2 177 aa15.68■□□□□ 0.1
HOXD4-201ENST00000306324 ISOC2Q96AB3 205 aa15.68■□□□□ 0.1
HOXD4-201ENST00000306324 SSBP4Q9BWG4 385 aaPredicted RBP15.68■□□□□ 0.1
HOXD4-201ENST00000306324 APLNQ9ULZ1 77 aa15.68■□□□□ 0.1
HOXD4-201ENST00000306324 RS1O15537 224 aa15.67■□□□□ 0.1
HOXD4-201ENST00000306324 IGLC6P0CF74 106 aa15.67■□□□□ 0.1
HOXD4-201ENST00000306324 FHL2Q14192 279 aa15.67■□□□□ 0.1
HOXD4-201ENST00000306324 PIK3CD-AS1Q5SR53 167 aa15.67■□□□□ 0.1
HOXD4-201ENST00000306324 SPANXN1Q5VSR9 72 aa15.67■□□□□ 0.1
HOXD4-201ENST00000306324 A8MWV9 139 aa15.66■□□□□ 0.1
HOXD4-201ENST00000306324 C15orf54Q8N8G6 183 aa15.66■□□□□ 0.1
HOXD4-201ENST00000306324 JPT2Q9H910 190 aa15.66■□□□□ 0.1
HOXD4-201ENST00000306324 OSTCQ9NRP0 149 aa15.66■□□□□ 0.1
HOXD4-201ENST00000306324 IGHV3-73A0A0B4J1V6 119 aa15.65■□□□□ 0.1
HOXD4-201ENST00000306324 LINC00862A6NCI5 91 aa15.65■□□□□ 0.1
HOXD4-201ENST00000306324 SFRP2Q96HF1 295 aa15.65■□□□□ 0.1
HOXD4-201ENST00000306324 A0A1W2PPQ1 181 aa15.65■□□□□ 0.1
HOXD4-201ENST00000306324 LYSTQ99698 3801 aa15.65■□□□□ 0.1
HOXD4-201ENST00000306324 PRO0255Q9UI72 69 aa15.65■□□□□ 0.1
HOXD4-201ENST00000306324 HHLA3Q9XRX5 114 aa15.65■□□□□ 0.1
HOXD4-201ENST00000306324 A8MWL6 223 aa15.64■□□□□ 0.09
HOXD4-201ENST00000306324 NUDT3O95989 172 aa15.64■□□□□ 0.09
HOXD4-201ENST00000306324 SLAQ13239 276 aa15.64■□□□□ 0.09
HOXD4-201ENST00000306324 LYZL1Q6UWQ5 148 aa15.64■□□□□ 0.09
HOXD4-201ENST00000306324 C15orf53Q8NAA6 179 aa15.64■□□□□ 0.09
HOXD4-201ENST00000306324 F2Z2F3 143 aa15.63■□□□□ 0.09
HOXD4-201ENST00000306324 PAX4O43316 350 aa15.63■□□□□ 0.09
HOXD4-201ENST00000306324 NXPH4O95158 308 aa15.63■□□□□ 0.09
HOXD4-201ENST00000306324 CT83Q5H943 113 aa15.63■□□□□ 0.09
HOXD4-201ENST00000306324 FAM74A4Q5TZK3 123 aa15.63■□□□□ 0.09
HOXD4-201ENST00000306324 SAMD10Q9BYL1 202 aa15.63■□□□□ 0.09
HOXD4-201ENST00000306324 KMT2CQ8NEZ4 4911 aaKnown RBP15.63■□□□□ 0.09
HOXD4-201ENST00000306324 CIDEAO60543 219 aa15.62■□□□□ 0.09
HOXD4-201ENST00000306324 CRYBA4P53673 196 aa15.62■□□□□ 0.09
HOXD4-201ENST00000306324 OR10G8Q8NGN5 311 aa15.62■□□□□ 0.09
HOXD4-201ENST00000306324 VSIG2Q96IQ7 327 aa15.62■□□□□ 0.09
HOXD4-201ENST00000306324 ALMS1Q8TCU4 4167 aa15.61■□□□□ 0.09
HOXD4-201ENST00000306324 A0A087WWL8 130 aa15.61■□□□□ 0.09
HOXD4-201ENST00000306324 TMEM218A2RU14 115 aa15.61■□□□□ 0.09
HOXD4-201ENST00000306324 GTSF1Q8WW33 167 aa15.61■□□□□ 0.09
HOXD4-201ENST00000306324 V9GYV3 84 aa15.61■□□□□ 0.09
HOXD4-201ENST00000306324 CACNG7P62955 275 aa15.6■□□□□ 0.09
HOXD4-201ENST00000306324 ZFP2Q6ZN57 461 aa15.6■□□□□ 0.09
HOXD4-201ENST00000306324 DNAH1Q9P2D7 4330 aa15.6■□□□□ 0.09
HOXD4-201ENST00000306324 F8W036 122 aa15.59■□□□□ 0.09
HOXD4-201ENST00000306324 H3BNG1 76 aa15.59■□□□□ 0.09
HOXD4-201ENST00000306324 GATA1P15976 413 aaPredicted RBP15.59■□□□□ 0.09
HOXD4-201ENST00000306324 CTRLP40313 264 aa15.59■□□□□ 0.09
HOXD4-201ENST00000306324 TSKUQ8WUA8 353 aa15.59■□□□□ 0.09
HOXD4-201ENST00000306324 RHODO00212 210 aa15.59■□□□□ 0.09
HOXD4-201ENST00000306324 ADCYAP1P18509 176 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms