RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 OVOL1O14753 267 aa4.06□□□□□ -1.76
VPS50-202ENST00000305866 CNIH1O95406 144 aa4.06□□□□□ -1.76
VPS50-202ENST00000305866 MT-ATP8P03928 68 aa4.06□□□□□ -1.76
VPS50-202ENST00000305866 CKS2P33552 79 aa4.06□□□□□ -1.76
VPS50-202ENST00000305866 C15orf32Q32M92 178 aa4.06□□□□□ -1.76
VPS50-202ENST00000305866 ZNF256Q9Y2P7 627 aaPredicted RBP4.06□□□□□ -1.76
VPS50-202ENST00000305866 TMSB15BA0A087X1C1 80 aa4.05□□□□□ -1.76
VPS50-202ENST00000305866 FABP2P12104 132 aa4.05□□□□□ -1.76
VPS50-202ENST00000305866 SRD5A1P18405 259 aa4.05□□□□□ -1.76
VPS50-202ENST00000305866 LAGE3Q14657 143 aa4.05□□□□□ -1.76
VPS50-202ENST00000305866 TWIST1Q15672 202 aa4.05□□□□□ -1.76
VPS50-202ENST00000305866 DEFB121Q5J5C9 76 aa4.05□□□□□ -1.76
VPS50-202ENST00000305866 C8orf86Q6ZUL3 223 aa4.05□□□□□ -1.76
VPS50-202ENST00000305866 NDUFA11Q86Y39 141 aa4.05□□□□□ -1.76
VPS50-202ENST00000305866 DLX4Q92988 240 aaPredicted RBP4.05□□□□□ -1.76
VPS50-202ENST00000305866 SMIM2Q9BVW6 85 aa4.05□□□□□ -1.76
VPS50-202ENST00000305866 ICE1Q9Y2F5 2266 aa4.05□□□□□ -1.76
VPS50-202ENST00000305866 IGHV1-69DA0A0B4J2H0 117 aa4.05□□□□□ -1.76
VPS50-202ENST00000305866 IGHV1-69P01742 117 aa4.05□□□□□ -1.76
VPS50-202ENST00000305866 SAA4P35542 130 aa4.05□□□□□ -1.76
VPS50-202ENST00000305866 CRYBA4P53673 196 aa4.05□□□□□ -1.76
VPS50-202ENST00000305866 Q6ZUT4 128 aa4.05□□□□□ -1.76
VPS50-202ENST00000305866 TMEM263Q8WUH6 116 aaKnown RBP4.05□□□□□ -1.76
VPS50-202ENST00000305866 RPL39LQ96EH5 51 aaKnown RBP4.05□□□□□ -1.76
VPS50-202ENST00000305866 FOXC2Q99958 501 aa4.05□□□□□ -1.76
VPS50-202ENST00000305866 MAP1LC3AQ9H492 121 aa4.05□□□□□ -1.76
VPS50-202ENST00000305866 NHP2Q9NX24 153 aaKnown RBP4.05□□□□□ -1.76
VPS50-202ENST00000305866 TRAV2A0A0B4J234 112 aa4.04□□□□□ -1.76
VPS50-202ENST00000305866 TCL1BO95988 128 aa4.04□□□□□ -1.76
VPS50-202ENST00000305866 P0DMU3 169 aa4.04□□□□□ -1.76
VPS50-202ENST00000305866 FAM231AP0DMU4 169 aa4.04□□□□□ -1.76
VPS50-202ENST00000305866 FAM231CP0DMU5 169 aa4.04□□□□□ -1.76
VPS50-202ENST00000305866 PLNP26678 52 aa4.04□□□□□ -1.76
VPS50-202ENST00000305866 ETDBQ3ZM63 59 aa4.04□□□□□ -1.76
VPS50-202ENST00000305866 Q8N2B8 174 aa4.04□□□□□ -1.76
VPS50-202ENST00000305866 C10orf105Q8TEF2 133 aa4.04□□□□□ -1.76
VPS50-202ENST00000305866 LGALS9O00182 355 aa4.04□□□□□ -1.76
VPS50-202ENST00000305866 PPP1R17O96001 155 aa4.04□□□□□ -1.76
VPS50-202ENST00000305866 ZNF876PQ49A33 203 aa4.04□□□□□ -1.76
VPS50-202ENST00000305866 C14orf178Q8N769 122 aaPredicted RBP4.04□□□□□ -1.76
VPS50-202ENST00000305866 SLC25A29Q8N8R3 303 aa4.04□□□□□ -1.76
VPS50-202ENST00000305866 ZNF479Q96JC4 524 aa4.04□□□□□ -1.76
VPS50-202ENST00000305866 C9orf85Q96MD7 179 aa4.04□□□□□ -1.76
VPS50-202ENST00000305866 H7C1H1 209 aa4.03□□□□□ -1.76
VPS50-202ENST00000305866 ZNF418Q8TF45 676 aaPredicted RBP4.03□□□□□ -1.76
VPS50-202ENST00000305866 PPDPFQ9H3Y8 114 aa4.03□□□□□ -1.76
VPS50-202ENST00000305866 TRAV41A0A0B4J266 112 aa4.03□□□□□ -1.76
VPS50-202ENST00000305866 C11orf86A6NJI1 115 aa4.03□□□□□ -1.76
VPS50-202ENST00000305866 IGHV3-23P01764 117 aa4.03□□□□□ -1.76
VPS50-202ENST00000305866 IGHV4-39P01824 125 aa4.03□□□□□ -1.76
VPS50-202ENST00000305866 CLEC3BP05452 202 aa4.03□□□□□ -1.76
VPS50-202ENST00000305866 GCSHP23434 173 aa4.03□□□□□ -1.76
VPS50-202ENST00000305866 MTURNQ8N3F0 131 aa4.03□□□□□ -1.76
VPS50-202ENST00000305866 METTL26Q96S19 204 aa4.03□□□□□ -1.76
VPS50-202ENST00000305866 ERG28Q9UKR5 140 aa4.03□□□□□ -1.76
VPS50-202ENST00000305866 DCANP1Q8TF63 244 aa4.03□□□□□ -1.76
VPS50-202ENST00000305866 UTP20O75691 2785 aaKnown RBP4.02□□□□□ -1.77
VPS50-202ENST00000305866 TRAV26-1A0A087WT03 109 aa4.02□□□□□ -1.77
VPS50-202ENST00000305866 A0A0J9YX75 114 aa4.02□□□□□ -1.77
VPS50-202ENST00000305866 SPRY2O43597 315 aa4.02□□□□□ -1.77
VPS50-202ENST00000305866 EDN2P20800 178 aa4.02□□□□□ -1.77
VPS50-202ENST00000305866 PSMB8P28062 276 aa4.02□□□□□ -1.77
VPS50-202ENST00000305866 DSCR9P59020 149 aa4.02□□□□□ -1.77
VPS50-202ENST00000305866 BEAN1Q3B7T3 259 aa4.02□□□□□ -1.77
VPS50-202ENST00000305866 TRBV27A0A0K0K1C4 114 aa4.02□□□□□ -1.77
VPS50-202ENST00000305866 CRLF1O75462 422 aa4.02□□□□□ -1.77
VPS50-202ENST00000305866 SMAGPQ0VAQ4 97 aa4.02□□□□□ -1.77
VPS50-202ENST00000305866 Q8N1Y9 231 aa4.02□□□□□ -1.77
VPS50-202ENST00000305866 DUSP14O95147 198 aaKnown RBP4.02□□□□□ -1.77
VPS50-202ENST00000305866 FOXC1Q12948 553 aa4.02□□□□□ -1.77
VPS50-202ENST00000305866 ORMDL2Q53FV1 153 aa4.02□□□□□ -1.77
VPS50-202ENST00000305866 TMEM78Q5T7P6 136 aa4.02□□□□□ -1.77
VPS50-202ENST00000305866 UNQ9165/PRO28630Q6UXU0 137 aa4.02□□□□□ -1.77
VPS50-202ENST00000305866 KLHL30-AS1Q8NEE0 82 aa4.02□□□□□ -1.77
VPS50-202ENST00000305866 PRADC1Q9BSG0 188 aa4.02□□□□□ -1.77
VPS50-202ENST00000305866 CR1P17927 2039 aa4.02□□□□□ -1.77
VPS50-202ENST00000305866 TRRAPQ9Y4A5 3859 aa4.01□□□□□ -1.77
VPS50-202ENST00000305866 ABCA1O95477 2261 aa4.01□□□□□ -1.77
VPS50-202ENST00000305866 J3QLI3 93 aa4.01□□□□□ -1.77
VPS50-202ENST00000305866 LY6HO94772 140 aa4.01□□□□□ -1.77
VPS50-202ENST00000305866 RPL13AP40429 203 aaKnown RBP4.01□□□□□ -1.77
VPS50-202ENST00000305866 DEFB1P60022 68 aa4.01□□□□□ -1.77
VPS50-202ENST00000305866 SUMO2P61956 95 aaKnown RBP4.01□□□□□ -1.77
VPS50-202ENST00000305866 GAGE13Q4V321 117 aa4.01□□□□□ -1.77
VPS50-202ENST00000305866 FAM19A3Q7Z5A8 133 aa4.01□□□□□ -1.77
VPS50-202ENST00000305866 C10orf126Q8N4M7 172 aa4.01□□□□□ -1.77
VPS50-202ENST00000305866 KIR2DL4Q99706 377 aa4.01□□□□□ -1.77
VPS50-202ENST00000305866 RAXQ9Y2V3 346 aa4.01□□□□□ -1.77
VPS50-202ENST00000305866 APC2O95996 2303 aa4.01□□□□□ -1.77
VPS50-202ENST00000305866 TRAV21A0A0B4J279 112 aa4.01□□□□□ -1.77
VPS50-202ENST00000305866 TMEM223A0PJW6 202 aa4.01□□□□□ -1.77
VPS50-202ENST00000305866 M0R2P5 195 aa4.01□□□□□ -1.77
VPS50-202ENST00000305866 TRBV12-3P01733 135 aa4.01□□□□□ -1.77
VPS50-202ENST00000305866 VCX2Q9H322 139 aa4.01□□□□□ -1.77
VPS50-202ENST00000305866 DNAH3Q8TD57 4116 aa4.01□□□□□ -1.77
VPS50-202ENST00000305866 OR11H12B2RN74 326 aa4.01□□□□□ -1.77
VPS50-202ENST00000305866 IGHV3-33P01772 117 aa4.01□□□□□ -1.77
VPS50-202ENST00000305866 RNASE4P34096 147 aaKnown RBP4.01□□□□□ -1.77
VPS50-202ENST00000305866 NSUN5P1Q3KNT7 163 aa4.01□□□□□ -1.77
VPS50-202ENST00000305866 TEN1Q86WV5 123 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms