RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 ANKRD29Q8N6D5 301 aa11.2□□□□□ -0.62
COL6A2-201ENST00000300527 NEXN-AS1Q8NBZ9 246 aa11.2□□□□□ -0.62
COL6A2-201ENST00000300527 C9JAW5 83 aa11.2□□□□□ -0.62
COL6A2-201ENST00000300527 ATP6V0E1O15342 81 aa11.2□□□□□ -0.62
COL6A2-201ENST00000300527 NPBQ8NG41 125 aa11.2□□□□□ -0.62
COL6A2-201ENST00000300527 SLC50A1Q9BRV3 221 aa11.2□□□□□ -0.62
COL6A2-201ENST00000300527 LINC01546A6NGU7 62 aa11.19□□□□□ -0.62
COL6A2-201ENST00000300527 B5MCH6 92 aa11.19□□□□□ -0.62
COL6A2-201ENST00000300527 SRD5A1P18405 259 aa11.19□□□□□ -0.62
COL6A2-201ENST00000300527 FAM74A4Q5TZK3 123 aa11.19□□□□□ -0.62
COL6A2-201ENST00000300527 TP53TG1Q9Y2A0 90 aa11.19□□□□□ -0.62
COL6A2-201ENST00000300527 TRBV20-1A0A075B6N2 111 aa11.19□□□□□ -0.62
COL6A2-201ENST00000300527 A0A087WWL8 130 aa11.18□□□□□ -0.62
COL6A2-201ENST00000300527 TRPT1Q86TN4 253 aaKnown RBP11.18□□□□□ -0.62
COL6A2-201ENST00000300527 TMEM190Q8WZ59 177 aa11.18□□□□□ -0.62
COL6A2-201ENST00000300527 TOMM6Q96B49 74 aa11.18□□□□□ -0.62
COL6A2-201ENST00000300527 TIMD4Q96H15 378 aa11.18□□□□□ -0.62
COL6A2-201ENST00000300527 IGHV3OR16-10A0A075B7F0 116 aa11.18□□□□□ -0.62
COL6A2-201ENST00000300527 IGHV4-39P01824 125 aa11.18□□□□□ -0.62
COL6A2-201ENST00000300527 HERVK_113P61574 105 aa11.18□□□□□ -0.62
COL6A2-201ENST00000300527 ZNF48Q96MX3 618 aaPredicted RBP11.18□□□□□ -0.62
COL6A2-201ENST00000300527 JPT2Q9H910 190 aa11.18□□□□□ -0.62
COL6A2-201ENST00000300527 ZNF256Q9Y2P7 627 aaPredicted RBP11.18□□□□□ -0.62
COL6A2-201ENST00000300527 TRAV2A0A0B4J234 112 aa11.18□□□□□ -0.62
COL6A2-201ENST00000300527 ASIPP42127 132 aa11.18□□□□□ -0.62
COL6A2-201ENST00000300527 TEN1Q86WV5 123 aa11.18□□□□□ -0.62
COL6A2-201ENST00000300527 OR11H6Q8NGC7 330 aa11.18□□□□□ -0.62
COL6A2-201ENST00000300527 TRAV12-1A0A0B4J245 112 aa11.17□□□□□ -0.62
COL6A2-201ENST00000300527 NDUFA11Q86Y39 141 aa11.17□□□□□ -0.62
COL6A2-201ENST00000300527 TEX29Q8N6K0 151 aa11.17□□□□□ -0.62
COL6A2-201ENST00000300527 DPH3P1Q9H4G8 78 aa11.17□□□□□ -0.62
COL6A2-201ENST00000300527 ATRXP46100 2492 aa11.17□□□□□ -0.62
COL6A2-201ENST00000300527 LYRM7Q5U5X0 104 aa11.17□□□□□ -0.62
COL6A2-201ENST00000300527 ZFAND3Q9H8U3 227 aa11.17□□□□□ -0.62
COL6A2-201ENST00000300527 TMEM219Q86XT9 240 aa11.17□□□□□ -0.62
COL6A2-201ENST00000300527 ZFAND6Q6FIF0 208 aa11.16□□□□□ -0.62
COL6A2-201ENST00000300527 ZNF688P0C7X2 276 aa11.16□□□□□ -0.62
COL6A2-201ENST00000300527 SRSF2Q01130 221 aaKnown RBP11.16□□□□□ -0.62
COL6A2-201ENST00000300527 IGFL3Q6UXB1 125 aa11.16□□□□□ -0.62
COL6A2-201ENST00000300527 C20orf173Q96LM9 149 aa11.16□□□□□ -0.62
COL6A2-201ENST00000300527 CRIP2P52943 208 aaPredicted RBP11.15□□□□□ -0.62
COL6A2-201ENST00000300527 OPRPNQ99935 248 aaPredicted RBP11.15□□□□□ -0.62
COL6A2-201ENST00000300527 PRO3102Q9H379 93 aa11.15□□□□□ -0.62
COL6A2-201ENST00000300527 MAP1AP78559 2803 aaPredicted RBP11.15□□□□□ -0.62
COL6A2-201ENST00000300527 OR10J6PQ8NGY7 276 aa11.15□□□□□ -0.62
COL6A2-201ENST00000300527 CCDC140Q96MF4 163 aa11.15□□□□□ -0.62
COL6A2-201ENST00000300527 SORL1Q92673 2214 aa11.15□□□□□ -0.62
COL6A2-201ENST00000300527 CLPSL1A2RUU4 121 aa11.15□□□□□ -0.63
COL6A2-201ENST00000300527 IGHV3-11P01762 117 aa11.15□□□□□ -0.63
COL6A2-201ENST00000300527 CFC1BP0CG36 223 aa11.15□□□□□ -0.63
COL6A2-201ENST00000300527 CFC1P0CG37 223 aa11.15□□□□□ -0.63
COL6A2-201ENST00000300527 LGALS3P17931 250 aaKnown RBP11.15□□□□□ -0.63
COL6A2-201ENST00000300527 TSPEAR-AS2P59090 65 aa11.15□□□□□ -0.63
COL6A2-201ENST00000300527 ADARB2-AS1A8MUL3 147 aa11.14□□□□□ -0.63
COL6A2-201ENST00000300527 A0A0J9YY99 117 aa11.14□□□□□ -0.63
COL6A2-201ENST00000300527 IGKV3-20P01619 116 aa11.14□□□□□ -0.63
COL6A2-201ENST00000300527 UBE2D1P51668 147 aa11.14□□□□□ -0.63
COL6A2-201ENST00000300527 Q8N9W7 124 aa11.14□□□□□ -0.63
COL6A2-201ENST00000300527 SLC25A20O43772 301 aa11.13□□□□□ -0.63
COL6A2-201ENST00000300527 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.13□□□□□ -0.63
COL6A2-201ENST00000300527 RBAKDNA6NC62 111 aa11.13□□□□□ -0.63
COL6A2-201ENST00000300527 CD7P09564 240 aa11.13□□□□□ -0.63
COL6A2-201ENST00000300527 NPC2P61916 151 aa11.13□□□□□ -0.63
COL6A2-201ENST00000300527 NTN5Q8WTR8 489 aaPredicted RBP11.13□□□□□ -0.63
COL6A2-201ENST00000300527 EEF1AKMT3Q96AZ1 226 aa11.13□□□□□ -0.63
COL6A2-201ENST00000300527 PRSS2P07478 247 aa11.12□□□□□ -0.63
COL6A2-201ENST00000300527 ATP6V0E2Q8NHE4 81 aa11.12□□□□□ -0.63
COL6A2-201ENST00000300527 PRO1854Q9UHT4 67 aa11.12□□□□□ -0.63
COL6A2-201ENST00000300527 TRAV21A0A0B4J279 112 aa11.12□□□□□ -0.63
COL6A2-201ENST00000300527 A4D1N5 150 aa11.12□□□□□ -0.63
COL6A2-201ENST00000300527 PSMG3-AS1Q96PY0 264 aa11.12□□□□□ -0.63
COL6A2-201ENST00000300527 ERG28Q9UKR5 140 aa11.12□□□□□ -0.63
COL6A2-201ENST00000300527 SNCGO76070 127 aa11.12□□□□□ -0.63
COL6A2-201ENST00000300527 TCF15Q12870 199 aa11.11□□□□□ -0.63
COL6A2-201ENST00000300527 C10orf126Q8N4M7 172 aa11.11□□□□□ -0.63
COL6A2-201ENST00000300527 CRYGDP07320 174 aa11.11□□□□□ -0.63
COL6A2-201ENST00000300527 UBE2D3P61077 147 aa11.11□□□□□ -0.63
COL6A2-201ENST00000300527 UBE2D2P62837 147 aa11.11□□□□□ -0.63
COL6A2-201ENST00000300527 GAGE2BQ13066 116 aa11.11□□□□□ -0.63
COL6A2-201ENST00000300527 GAGE2EQ4V326 116 aa11.11□□□□□ -0.63
COL6A2-201ENST00000300527 PIP4P1Q86T03 277 aa11.11□□□□□ -0.63
COL6A2-201ENST00000300527 FAM110DQ8TAY7 271 aaPredicted RBP11.11□□□□□ -0.63
COL6A2-201ENST00000300527 GAGE2DQ9UEU5 116 aa11.11□□□□□ -0.63
COL6A2-201ENST00000300527 TRBV12-3P01733 135 aa11.1□□□□□ -0.63
COL6A2-201ENST00000300527 LY6G5BQ8NDX9 201 aa11.1□□□□□ -0.63
COL6A2-201ENST00000300527 ZFP36P26651 326 aaKnown RBP11.1□□□□□ -0.63
COL6A2-201ENST00000300527 UNQ9165/PRO28630Q6UXU0 137 aa11.1□□□□□ -0.63
COL6A2-201ENST00000300527 C9orf47Q6ZRZ4 202 aa11.1□□□□□ -0.63
COL6A2-201ENST00000300527 UBTD1Q9HAC8 227 aa11.1□□□□□ -0.63
COL6A2-201ENST00000300527 J3QQQ9 107 aa11.1□□□□□ -0.63
COL6A2-201ENST00000300527 COX6B1P14854 86 aa11.1□□□□□ -0.63
COL6A2-201ENST00000300527 PMVKQ15126 192 aa11.1□□□□□ -0.63
COL6A2-201ENST00000300527 TTC32Q5I0X7 151 aa11.1□□□□□ -0.63
COL6A2-201ENST00000300527 ODF3BA8MYP8 253 aa11.09□□□□□ -0.63
COL6A2-201ENST00000300527 TSHBP01222 138 aa11.09□□□□□ -0.63
COL6A2-201ENST00000300527 C3orf56Q8N813 242 aa11.09□□□□□ -0.63
COL6A2-201ENST00000300527 IGLV4-69A0A075B6H9 119 aa11.08□□□□□ -0.64
COL6A2-201ENST00000300527 TRAV4A0A0B4J268 109 aa11.08□□□□□ -0.64
COL6A2-201ENST00000300527 IGHV3-30P01768 117 aa11.08□□□□□ -0.64
COL6A2-201ENST00000300527 IGHV3-30-5P0DP03 117 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms