RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 NACAE9PAV3 2078 aa8.75□□□□□ -1.01
TRUB1-201ENST00000298746 ZNF688P0C7X2 276 aa8.75□□□□□ -1.01
TRUB1-201ENST00000298746 GAGE2BQ13066 116 aa8.75□□□□□ -1.01
TRUB1-201ENST00000298746 GAGE2EQ4V326 116 aa8.75□□□□□ -1.01
TRUB1-201ENST00000298746 GAGE2DQ9UEU5 116 aa8.75□□□□□ -1.01
TRUB1-201ENST00000298746 CSMD1Q96PZ7 3565 aa8.75□□□□□ -1.01
TRUB1-201ENST00000298746 ANKRD29Q8N6D5 301 aa8.74□□□□□ -1.01
TRUB1-201ENST00000298746 TRAV12-1A0A0B4J245 112 aa8.74□□□□□ -1.01
TRUB1-201ENST00000298746 LINC01548A6NM66 108 aa8.74□□□□□ -1.01
TRUB1-201ENST00000298746 SMCPP49901 116 aaPredicted RBP8.74□□□□□ -1.01
TRUB1-201ENST00000298746 CDIP1Q9H305 208 aa8.74□□□□□ -1.01
TRUB1-201ENST00000298746 A0A087WWL8 130 aa8.74□□□□□ -1.01
TRUB1-201ENST00000298746 TRAV21A0A0B4J279 112 aa8.74□□□□□ -1.01
TRUB1-201ENST00000298746 IGHV7-4-1A0A0J9YVY3 117 aa8.74□□□□□ -1.01
TRUB1-201ENST00000298746 C11orf86A6NJI1 115 aa8.74□□□□□ -1.01
TRUB1-201ENST00000298746 TMEM262E9PQX1 116 aa8.74□□□□□ -1.01
TRUB1-201ENST00000298746 ATP6V0E1O15342 81 aa8.74□□□□□ -1.01
TRUB1-201ENST00000298746 NPBQ8NG41 125 aa8.74□□□□□ -1.01
TRUB1-201ENST00000298746 EEF1AKMT3Q96AZ1 226 aa8.74□□□□□ -1.01
TRUB1-201ENST00000298746 LY6LH3BQJ8 138 aa8.73□□□□□ -1.01
TRUB1-201ENST00000298746 GNRH2O43555 120 aa8.73□□□□□ -1.01
TRUB1-201ENST00000298746 SLC25A20O43772 301 aa8.73□□□□□ -1.01
TRUB1-201ENST00000298746 SRD5A1P18405 259 aa8.73□□□□□ -1.01
TRUB1-201ENST00000298746 GATA3P23771 443 aa8.73□□□□□ -1.01
TRUB1-201ENST00000298746 NEXN-AS1Q8NBZ9 246 aa8.73□□□□□ -1.01
TRUB1-201ENST00000298746 TOMM6Q96B49 74 aa8.73□□□□□ -1.01
TRUB1-201ENST00000298746 IGHV7-81A0A0B4J1V7 117 aa8.73□□□□□ -1.01
TRUB1-201ENST00000298746 RPL39P62891 51 aaKnown RBP8.73□□□□□ -1.01
TRUB1-201ENST00000298746 NDUFA11Q86Y39 141 aa8.73□□□□□ -1.01
TRUB1-201ENST00000298746 RASL10AQ92737 203 aa8.73□□□□□ -1.01
TRUB1-201ENST00000298746 PRO1854Q9UHT4 67 aa8.73□□□□□ -1.01
TRUB1-201ENST00000298746 F6UB75 175 aa8.73□□□□□ -1.01
TRUB1-201ENST00000298746 SRSF2Q01130 221 aaKnown RBP8.73□□□□□ -1.01
TRUB1-201ENST00000298746 PRR30Q53SZ7 412 aaPredicted RBP8.73□□□□□ -1.01
TRUB1-201ENST00000298746 ERG28Q9UKR5 140 aa8.73□□□□□ -1.01
TRUB1-201ENST00000298746 COX8CQ7Z4L0 72 aa8.72□□□□□ -1.01
TRUB1-201ENST00000298746 VCX2Q9H322 139 aa8.72□□□□□ -1.01
TRUB1-201ENST00000298746 LRBAP50851 2863 aa8.72□□□□□ -1.01
TRUB1-201ENST00000298746 IGHV3OR16-10A0A075B7F0 116 aa8.72□□□□□ -1.01
TRUB1-201ENST00000298746 IGKV3-20P01619 116 aa8.72□□□□□ -1.01
TRUB1-201ENST00000298746 IGFL3Q6UXB1 125 aa8.72□□□□□ -1.01
TRUB1-201ENST00000298746 TRPT1Q86TN4 253 aaKnown RBP8.72□□□□□ -1.01
TRUB1-201ENST00000298746 ATP6V0E2Q8NHE4 81 aa8.72□□□□□ -1.01
TRUB1-201ENST00000298746 PTPRQQ9UMZ3 2332 aa8.71□□□□□ -1.01
TRUB1-201ENST00000298746 RBAKDNA6NC62 111 aa8.71□□□□□ -1.01
TRUB1-201ENST00000298746 IGHV3-11P01762 117 aa8.71□□□□□ -1.01
TRUB1-201ENST00000298746 PAPPA-AS1Q5QFB9 102 aa8.71□□□□□ -1.01
TRUB1-201ENST00000298746 TMEM219Q86XT9 240 aa8.71□□□□□ -1.01
TRUB1-201ENST00000298746 NTN5Q8WTR8 489 aaPredicted RBP8.71□□□□□ -1.01
TRUB1-201ENST00000298746 PRR9Q5T870 116 aa8.71□□□□□ -1.02
TRUB1-201ENST00000298746 Q6ZS46 218 aa8.71□□□□□ -1.02
TRUB1-201ENST00000298746 C10orf126Q8N4M7 172 aa8.71□□□□□ -1.02
TRUB1-201ENST00000298746 GAGE5Q13069 117 aa8.7□□□□□ -1.02
TRUB1-201ENST00000298746 GAGE6Q13070 117 aa8.7□□□□□ -1.02
TRUB1-201ENST00000298746 PMVKQ15126 192 aa8.7□□□□□ -1.02
TRUB1-201ENST00000298746 ZNF56Q15929 161 aa8.7□□□□□ -1.02
TRUB1-201ENST00000298746 FAM159AQ6UWV7 190 aa8.7□□□□□ -1.02
TRUB1-201ENST00000298746 CARD19Q96LW7 228 aa8.7□□□□□ -1.02
TRUB1-201ENST00000298746 A4D1N5 150 aa8.7□□□□□ -1.02
TRUB1-201ENST00000298746 HTN1P15515 57 aa8.7□□□□□ -1.02
TRUB1-201ENST00000298746 NPC2P61916 151 aa8.7□□□□□ -1.02
TRUB1-201ENST00000298746 J3QQQ9 107 aa8.7□□□□□ -1.02
TRUB1-201ENST00000298746 PPP1R17O96001 155 aa8.7□□□□□ -1.02
TRUB1-201ENST00000298746 GRNP28799 593 aaKnown RBP8.7□□□□□ -1.02
TRUB1-201ENST00000298746 TCF15Q12870 199 aa8.7□□□□□ -1.02
TRUB1-201ENST00000298746 ZNF575Q86XF7 245 aa8.7□□□□□ -1.02
TRUB1-201ENST00000298746 JPT2Q9H910 190 aa8.7□□□□□ -1.02
TRUB1-201ENST00000298746 UBTD1Q9HAC8 227 aa8.7□□□□□ -1.02
TRUB1-201ENST00000298746 MSRB2Q9Y3D2 182 aa8.7□□□□□ -1.02
TRUB1-201ENST00000298746 COL27A1Q8IZC6 1860 aaPredicted RBP8.69□□□□□ -1.02
TRUB1-201ENST00000298746 A0A0J9YY99 117 aa8.69□□□□□ -1.02
TRUB1-201ENST00000298746 LINC01546A6NGU7 62 aa8.69□□□□□ -1.02
TRUB1-201ENST00000298746 CD7P09564 240 aa8.69□□□□□ -1.02
TRUB1-201ENST00000298746 FHL3Q13643 280 aa8.69□□□□□ -1.02
TRUB1-201ENST00000298746 ADARB2-AS1A8MUL3 147 aa8.69□□□□□ -1.02
TRUB1-201ENST00000298746 CFC1BP0CG36 223 aa8.69□□□□□ -1.02
TRUB1-201ENST00000298746 CFC1P0CG37 223 aa8.69□□□□□ -1.02
TRUB1-201ENST00000298746 FAM110DQ8TAY7 271 aaPredicted RBP8.69□□□□□ -1.02
TRUB1-201ENST00000298746 UBE2D1P51668 147 aa8.68□□□□□ -1.02
TRUB1-201ENST00000298746 SVIPQ8NHG7 77 aa8.68□□□□□ -1.02
TRUB1-201ENST00000298746 ZFAND3Q9H8U3 227 aa8.68□□□□□ -1.02
TRUB1-201ENST00000298746 C9orf139Q6ZV77 190 aa8.68□□□□□ -1.02
TRUB1-201ENST00000298746 Q8N9W7 124 aa8.68□□□□□ -1.02
TRUB1-201ENST00000298746 SPENQ96T58 3664 aaKnown RBP8.68□□□□□ -1.02
TRUB1-201ENST00000298746 SDHAF1A6NFY7 115 aa8.68□□□□□ -1.02
TRUB1-201ENST00000298746 C9orf47Q6ZRZ4 202 aa8.68□□□□□ -1.02
TRUB1-201ENST00000298746 LINC00477Q96M19 166 aa8.68□□□□□ -1.02
TRUB1-201ENST00000298746 OPRPNQ99935 248 aaPredicted RBP8.68□□□□□ -1.02
TRUB1-201ENST00000298746 MAP1AP78559 2803 aaPredicted RBP8.68□□□□□ -1.02
TRUB1-201ENST00000298746 TRAV8-4A0A0B4J246 113 aa8.67□□□□□ -1.02
TRUB1-201ENST00000298746 M0R1W7 72 aa8.67□□□□□ -1.02
TRUB1-201ENST00000298746 CCDC140Q96MF4 163 aa8.67□□□□□ -1.02
TRUB1-201ENST00000298746 VCYO14598 125 aa8.67□□□□□ -1.02
TRUB1-201ENST00000298746 IGF2RP11717 2491 aa8.67□□□□□ -1.02
TRUB1-201ENST00000298746 PF4V1P10720 104 aa8.66□□□□□ -1.02
TRUB1-201ENST00000298746 CRIP2P52943 208 aaPredicted RBP8.66□□□□□ -1.02
TRUB1-201ENST00000298746 TRAV12-3A0A0B4J271 114 aa8.66□□□□□ -1.02
TRUB1-201ENST00000298746 UBE2D3P61077 147 aa8.66□□□□□ -1.02
TRUB1-201ENST00000298746 UBE2D2P62837 147 aa8.66□□□□□ -1.02
TRUB1-201ENST00000298746 SPXQ9BT56 116 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms