RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 VAMP3Q15836 100 aa14.84□□□□□ -0.03
NFIL3-201ENST00000297689 C20orf78Q9BR46 151 aa14.84□□□□□ -0.03
NFIL3-201ENST00000297689 DPH3P1Q9H4G8 78 aa14.84□□□□□ -0.03
NFIL3-201ENST00000297689 K7EP13 123 aa14.83□□□□□ -0.03
NFIL3-201ENST00000297689 M0R381 172 aa14.83□□□□□ -0.03
NFIL3-201ENST00000297689 IGHV4-59P01825 116 aa14.83□□□□□ -0.03
NFIL3-201ENST00000297689 TCTAP57738 103 aa14.83□□□□□ -0.03
NFIL3-201ENST00000297689 ERASQ7Z444 233 aa14.83□□□□□ -0.03
NFIL3-201ENST00000297689 TMEM89A2RUT3 159 aa14.83□□□□□ -0.04
NFIL3-201ENST00000297689 J3QLI3 93 aa14.83□□□□□ -0.04
NFIL3-201ENST00000297689 GNRH2O43555 120 aa14.83□□□□□ -0.04
NFIL3-201ENST00000297689 NMUP48645 174 aa14.83□□□□□ -0.04
NFIL3-201ENST00000297689 IGKV3-7A0A075B6H7 116 aa14.82□□□□□ -0.04
NFIL3-201ENST00000297689 C7orf71A4D174 169 aa14.82□□□□□ -0.04
NFIL3-201ENST00000297689 DPM2O94777 84 aa14.82□□□□□ -0.04
NFIL3-201ENST00000297689 IGHV4-31P0DP07 118 aa14.82□□□□□ -0.04
NFIL3-201ENST00000297689 S100A4P26447 101 aaKnown RBP14.82□□□□□ -0.04
NFIL3-201ENST00000297689 DEFB113Q30KQ7 82 aa14.82□□□□□ -0.04
NFIL3-201ENST00000297689 HIST2H2BCQ6DN03 193 aa14.82□□□□□ -0.04
NFIL3-201ENST00000297689 MYOZ3Q8TDC0 251 aa14.82□□□□□ -0.04
NFIL3-201ENST00000297689 PHLDA3Q9Y5J5 127 aa14.82□□□□□ -0.04
NFIL3-201ENST00000297689 FASNP49327 2511 aaKnown RBP14.82□□□□□ -0.04
NFIL3-201ENST00000297689 TRAV8-6A0A0B4J262 113 aa14.81□□□□□ -0.04
NFIL3-201ENST00000297689 SUMO2P61956 95 aaKnown RBP14.81□□□□□ -0.04
NFIL3-201ENST00000297689 C14orf178Q8N769 122 aaPredicted RBP14.81□□□□□ -0.04
NFIL3-201ENST00000297689 BEX4Q9NWD9 120 aaPredicted RBP14.81□□□□□ -0.04
NFIL3-201ENST00000297689 HIGD1BQ9P298 99 aa14.81□□□□□ -0.04
NFIL3-201ENST00000297689 K7EMI3 77 aa14.81□□□□□ -0.04
NFIL3-201ENST00000297689 HLA-DRB4P13762 266 aa14.81□□□□□ -0.04
NFIL3-201ENST00000297689 LINC00315P59091 139 aa14.81□□□□□ -0.04
NFIL3-201ENST00000297689 SAMD13Q5VXD3 122 aa14.81□□□□□ -0.04
NFIL3-201ENST00000297689 KIF25-AS1Q9Y6Z4 181 aa14.81□□□□□ -0.04
NFIL3-201ENST00000297689 HLA-DRB4X5D2U9 266 aa14.81□□□□□ -0.04
NFIL3-201ENST00000297689 MUC4Q99102 2169 aa14.81□□□□□ -0.04
NFIL3-201ENST00000297689 A0A087WX48 190 aa14.8□□□□□ -0.04
NFIL3-201ENST00000297689 FSHBP01225 129 aa14.8□□□□□ -0.04
NFIL3-201ENST00000297689 AMMECR1LQ6DCA0 310 aa14.8□□□□□ -0.04
NFIL3-201ENST00000297689 C10orf99Q6UWK7 81 aa14.8□□□□□ -0.04
NFIL3-201ENST00000297689 MRPL35Q9NZE8 188 aaKnown RBP14.8□□□□□ -0.04
NFIL3-201ENST00000297689 SRD5A1P18405 259 aa14.8□□□□□ -0.04
NFIL3-201ENST00000297689 ZANQ9Y493 2812 aa14.8□□□□□ -0.04
NFIL3-201ENST00000297689 H3BRM9 83 aa14.79□□□□□ -0.04
NFIL3-201ENST00000297689 Q5PR19 223 aa14.79□□□□□ -0.04
NFIL3-201ENST00000297689 ZC2HC1BQ5TFG8 222 aa14.79□□□□□ -0.04
NFIL3-201ENST00000297689 TOMM6Q96B49 74 aa14.79□□□□□ -0.04
NFIL3-201ENST00000297689 RPL39LQ96EH5 51 aaKnown RBP14.79□□□□□ -0.04
NFIL3-201ENST00000297689 SELENOKQ9Y6D0 94 aa14.79□□□□□ -0.04
NFIL3-201ENST00000297689 TRAV12-1A0A0B4J245 112 aa14.78□□□□□ -0.04
NFIL3-201ENST00000297689 ID1P41134 155 aa14.78□□□□□ -0.04
NFIL3-201ENST00000297689 ORMDL2Q53FV1 153 aa14.78□□□□□ -0.04
NFIL3-201ENST00000297689 OR4C5Q8NGB2 326 aa14.78□□□□□ -0.04
NFIL3-201ENST00000297689 A6NDN8 102 aa14.78□□□□□ -0.04
NFIL3-201ENST00000297689 KRTAP1-3Q8IUG1 177 aa14.78□□□□□ -0.04
NFIL3-201ENST00000297689 LRRC75A-AS1Q8N1F1 130 aa14.78□□□□□ -0.04
NFIL3-201ENST00000297689 TTTY13Q9BZ97 58 aa14.77□□□□□ -0.04
NFIL3-201ENST00000297689 ITPR2Q14571 2701 aa14.77□□□□□ -0.05
NFIL3-201ENST00000297689 IGHV4OR15-8A0A075B7B6 117 aa14.77□□□□□ -0.05
NFIL3-201ENST00000297689 A0A087WW49 117 aa14.77□□□□□ -0.05
NFIL3-201ENST00000297689 GTSCR1Q86UQ5 136 aa14.77□□□□□ -0.05
NFIL3-201ENST00000297689 RNASE8Q8TDE3 154 aaKnown RBP14.77□□□□□ -0.05
NFIL3-201ENST00000297689 AP1S3Q96PC3 154 aa14.77□□□□□ -0.05
NFIL3-201ENST00000297689 UNC79Q9P2D8 2635 aa14.76□□□□□ -0.05
NFIL3-201ENST00000297689 C9orf118A6NHY6 69 aa14.76□□□□□ -0.05
NFIL3-201ENST00000297689 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.76□□□□□ -0.05
NFIL3-201ENST00000297689 ODF3Q96PU9 254 aa14.76□□□□□ -0.05
NFIL3-201ENST00000297689 TMEM160Q9NX00 188 aa14.76□□□□□ -0.05
NFIL3-201ENST00000297689 RPL32P62910 135 aaKnown RBP14.75□□□□□ -0.05
NFIL3-201ENST00000297689 TRBV25-1A0A075B6N4 114 aa14.74□□□□□ -0.05
NFIL3-201ENST00000297689 PPP1R17O96001 155 aa14.74□□□□□ -0.05
NFIL3-201ENST00000297689 NEXN-AS1Q8NBZ9 246 aa14.74□□□□□ -0.05
NFIL3-201ENST00000297689 Q96MF0 132 aa14.74□□□□□ -0.05
NFIL3-201ENST00000297689 PLNP26678 52 aa14.73□□□□□ -0.05
NFIL3-201ENST00000297689 F8VRH5 84 aa14.73□□□□□ -0.05
NFIL3-201ENST00000297689 H7C1H1 209 aa14.73□□□□□ -0.05
NFIL3-201ENST00000297689 K7EQG2 157 aa14.73□□□□□ -0.05
NFIL3-201ENST00000297689 PDZD2O15018 2839 aa14.72□□□□□ -0.05
NFIL3-201ENST00000297689 A0A0J9YX75 114 aa14.72□□□□□ -0.05
NFIL3-201ENST00000297689 UFSP1Q6NVU6 142 aa14.72□□□□□ -0.05
NFIL3-201ENST00000297689 FAM159AQ6UWV7 190 aa14.72□□□□□ -0.05
NFIL3-201ENST00000297689 LGALS9O00182 355 aa14.72□□□□□ -0.05
NFIL3-201ENST00000297689 MGPP08493 103 aa14.72□□□□□ -0.05
NFIL3-201ENST00000297689 MAPKAPK5-AS1Q8N8E1 139 aa14.72□□□□□ -0.05
NFIL3-201ENST00000297689 SCGB3A1Q96QR1 104 aa14.72□□□□□ -0.05
NFIL3-201ENST00000297689 JMJD8Q96S16 334 aa14.72□□□□□ -0.05
NFIL3-201ENST00000297689 HECTD1Q9ULT8 2610 aa14.71□□□□□ -0.05
NFIL3-201ENST00000297689 PRRC2AP48634 2157 aaKnown RBP14.71□□□□□ -0.05
NFIL3-201ENST00000297689 RBX1P62877 108 aa14.71□□□□□ -0.05
NFIL3-201ENST00000297689 C2orf66Q6UXQ4 117 aa14.71□□□□□ -0.05
NFIL3-201ENST00000297689 Q6YL49 198 aa14.71□□□□□ -0.05
NFIL3-201ENST00000297689 CHAC1Q9BUX1 264 aa14.71□□□□□ -0.05
NFIL3-201ENST00000297689 VPREB3Q9UKI3 123 aa14.71□□□□□ -0.05
NFIL3-201ENST00000297689 POLR2KP53803 58 aaKnown RBP14.7□□□□□ -0.06
NFIL3-201ENST00000297689 RNF152Q8N8N0 203 aa14.7□□□□□ -0.06
NFIL3-201ENST00000297689 C9orf85Q96MD7 179 aa14.7□□□□□ -0.06
NFIL3-201ENST00000297689 ELANEP08246 267 aa14.7□□□□□ -0.06
NFIL3-201ENST00000297689 LGALS1P09382 135 aaKnown RBP14.7□□□□□ -0.06
NFIL3-201ENST00000297689 ZNF688P0C7X2 276 aa14.7□□□□□ -0.06
NFIL3-201ENST00000297689 TM2D2Q9BX73 214 aa14.7□□□□□ -0.06
NFIL3-201ENST00000297689 JPT2Q9H910 190 aa14.7□□□□□ -0.06
NFIL3-201ENST00000297689 ZNF702PQ9H963 129 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms