RNA–Protein interactions for RNA: ENST00000297439.3

DEFB1-201, Transcript of defensin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEFB1, Length 478 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEFB1-201ENST00000297439 PHLDA3Q9Y5J5 127 aa4.95□□□□□ -1.62
DEFB1-201ENST00000297439 NBASA2RRP1 2371 aa4.95□□□□□ -1.62
DEFB1-201ENST00000297439 SPTBN1Q01082 2364 aaKnown RBP4.95□□□□□ -1.62
DEFB1-201ENST00000297439 WNK2Q9Y3S1 2297 aa4.94□□□□□ -1.62
DEFB1-201ENST00000297439 A0A0J9YX75 114 aa4.94□□□□□ -1.62
DEFB1-201ENST00000297439 H7C1H1 209 aa4.94□□□□□ -1.62
DEFB1-201ENST00000297439 DUSP14O95147 198 aaKnown RBP4.94□□□□□ -1.62
DEFB1-201ENST00000297439 IGHV3-11P01762 117 aa4.94□□□□□ -1.62
DEFB1-201ENST00000297439 PRSS1P07477 247 aa4.94□□□□□ -1.62
DEFB1-201ENST00000297439 LGALS1P09382 135 aaKnown RBP4.94□□□□□ -1.62
DEFB1-201ENST00000297439 PRB4P10163 310 aaPredicted RBP4.94□□□□□ -1.62
DEFB1-201ENST00000297439 DEFB112Q30KQ8 113 aa4.94□□□□□ -1.62
DEFB1-201ENST00000297439 PAPPA-AS1Q5QFB9 102 aa4.94□□□□□ -1.62
DEFB1-201ENST00000297439 Q6YL49 198 aa4.94□□□□□ -1.62
DEFB1-201ENST00000297439 C9orf85Q96MD7 179 aa4.94□□□□□ -1.62
DEFB1-201ENST00000297439 FOXC2Q99958 501 aa4.94□□□□□ -1.62
DEFB1-201ENST00000297439 TM2D2Q9BX73 214 aa4.94□□□□□ -1.62
DEFB1-201ENST00000297439 BEX4Q9NWD9 120 aaPredicted RBP4.94□□□□□ -1.62
DEFB1-201ENST00000297439 TP73-AS1Q9UF72 201 aa4.94□□□□□ -1.62
DEFB1-201ENST00000297439 COL6A6A6NMZ7 2263 aa4.94□□□□□ -1.62
DEFB1-201ENST00000297439 DCHS1Q96JQ0 3298 aa4.94□□□□□ -1.62
DEFB1-201ENST00000297439 C9orf118A6NHY6 69 aa4.93□□□□□ -1.62
DEFB1-201ENST00000297439 IGHV4-59P01825 116 aa4.93□□□□□ -1.62
DEFB1-201ENST00000297439 POLR2KP53803 58 aaKnown RBP4.93□□□□□ -1.62
DEFB1-201ENST00000297439 RIPPLY3P57055 190 aa4.93□□□□□ -1.62
DEFB1-201ENST00000297439 SNRPD3P62318 126 aaKnown RBP4.93□□□□□ -1.62
DEFB1-201ENST00000297439 VAMP3Q15836 100 aa4.93□□□□□ -1.62
DEFB1-201ENST00000297439 ZC2HC1BQ5TFG8 222 aa4.93□□□□□ -1.62
DEFB1-201ENST00000297439 UFSP1Q6NVU6 142 aa4.93□□□□□ -1.62
DEFB1-201ENST00000297439 FAM159AQ6UWV7 190 aa4.93□□□□□ -1.62
DEFB1-201ENST00000297439 ERASQ7Z444 233 aa4.93□□□□□ -1.62
DEFB1-201ENST00000297439 TEX29Q8N6K0 151 aa4.93□□□□□ -1.62
DEFB1-201ENST00000297439 NEXN-AS1Q8NBZ9 246 aa4.93□□□□□ -1.62
DEFB1-201ENST00000297439 OR4C5Q8NGB2 326 aa4.93□□□□□ -1.62
DEFB1-201ENST00000297439 PTH2Q96A98 100 aa4.93□□□□□ -1.62
DEFB1-201ENST00000297439 C18orf15Q96N68 181 aa4.93□□□□□ -1.62
DEFB1-201ENST00000297439 JMJD8Q96S16 334 aa4.93□□□□□ -1.62
DEFB1-201ENST00000297439 TIMM17AQ99595 171 aa4.93□□□□□ -1.62
DEFB1-201ENST00000297439 MRPL35Q9NZE8 188 aaKnown RBP4.93□□□□□ -1.62
DEFB1-201ENST00000297439 ZNF256Q9Y2P7 627 aaPredicted RBP4.93□□□□□ -1.62
DEFB1-201ENST00000297439 TIMM8BQ9Y5J9 83 aaPredicted RBP4.93□□□□□ -1.62
DEFB1-201ENST00000297439 NCOR2Q9Y618 2525 aa4.93□□□□□ -1.62
DEFB1-201ENST00000297439 SMG1Q96Q15 3661 aaKnown RBP4.93□□□□□ -1.62
DEFB1-201ENST00000297439 DCHS2Q6V1P9 2916 aa4.93□□□□□ -1.62
DEFB1-201ENST00000297439 ITPR1Q14643 2758 aa4.93□□□□□ -1.62
DEFB1-201ENST00000297439 PKD1L2Q7Z442 2459 aa4.92□□□□□ -1.62
DEFB1-201ENST00000297439 TRBV25-1A0A075B6N4 114 aa4.92□□□□□ -1.62
DEFB1-201ENST00000297439 IGKV2D-26A0A0A0MRZ7 120 aa4.92□□□□□ -1.62
DEFB1-201ENST00000297439 TRAV26-2A0A0B4J265 109 aa4.92□□□□□ -1.62
DEFB1-201ENST00000297439 TRBV27A0A0K0K1C4 114 aa4.92□□□□□ -1.62
DEFB1-201ENST00000297439 COX6B1P14854 86 aa4.92□□□□□ -1.62
DEFB1-201ENST00000297439 RNASE4P34096 147 aaKnown RBP4.92□□□□□ -1.62
DEFB1-201ENST00000297439 NMUP48645 174 aa4.92□□□□□ -1.62
DEFB1-201ENST00000297439 RHOHQ15669 191 aa4.92□□□□□ -1.62
DEFB1-201ENST00000297439 C2orf66Q6UXQ4 117 aa4.92□□□□□ -1.62
DEFB1-201ENST00000297439 FOXI2Q6ZQN5 318 aa4.92□□□□□ -1.62
DEFB1-201ENST00000297439 Q6ZQT7 251 aa4.92□□□□□ -1.62
DEFB1-201ENST00000297439 LCNL1Q6ZST4 164 aa4.92□□□□□ -1.62
DEFB1-201ENST00000297439 GTF2H5Q6ZYL4 71 aa4.92□□□□□ -1.62
DEFB1-201ENST00000297439 PCP2Q8IVA1 136 aa4.92□□□□□ -1.62
DEFB1-201ENST00000297439 TMEM86BQ8N661 226 aa4.92□□□□□ -1.62
DEFB1-201ENST00000297439 SYT8Q8NBV8 401 aa4.92□□□□□ -1.62
DEFB1-201ENST00000297439 TMEM141Q96I45 108 aa4.92□□□□□ -1.62
DEFB1-201ENST00000297439 CHAC1Q9BUX1 264 aa4.92□□□□□ -1.62
DEFB1-201ENST00000297439 ZNF702PQ9H963 129 aa4.92□□□□□ -1.62
DEFB1-201ENST00000297439 CYSLTR1Q9Y271 337 aa4.92□□□□□ -1.62
DEFB1-201ENST00000297439 CBY1Q9Y3M2 126 aa4.92□□□□□ -1.62
DEFB1-201ENST00000297439 SPTBN4Q9H254 2564 aa4.92□□□□□ -1.62
DEFB1-201ENST00000297439 TRAV8-6A0A0B4J262 113 aa4.91□□□□□ -1.62
DEFB1-201ENST00000297439 IGHV3-16A0A0C4DH30 117 aa4.91□□□□□ -1.62
DEFB1-201ENST00000297439 E9PLD3 99 aa4.91□□□□□ -1.62
DEFB1-201ENST00000297439 F6UB75 175 aa4.91□□□□□ -1.62
DEFB1-201ENST00000297439 VCYO14598 125 aa4.91□□□□□ -1.62
DEFB1-201ENST00000297439 IGHV4-31P0DP07 118 aa4.91□□□□□ -1.62
DEFB1-201ENST00000297439 CDKN1BP46527 198 aa4.91□□□□□ -1.62
DEFB1-201ENST00000297439 FXYD7P58549 80 aa4.91□□□□□ -1.62
DEFB1-201ENST00000297439 RPL11P62913 178 aaKnown RBP4.91□□□□□ -1.62
DEFB1-201ENST00000297439 NSUN5P1Q3KNT7 163 aa4.91□□□□□ -1.62
DEFB1-201ENST00000297439 Q5PR19 223 aa4.91□□□□□ -1.62
DEFB1-201ENST00000297439 AMTNQ6UX39 209 aa4.91□□□□□ -1.62
DEFB1-201ENST00000297439 C14orf178Q8N769 122 aaPredicted RBP4.91□□□□□ -1.62
DEFB1-201ENST00000297439 OR5A1Q8NGJ0 315 aa4.91□□□□□ -1.62
DEFB1-201ENST00000297439 SCGB3A1Q96QR1 104 aa4.91□□□□□ -1.62
DEFB1-201ENST00000297439 SPAG8Q99932 426 aaPredicted RBP4.91□□□□□ -1.62
DEFB1-201ENST00000297439 LINC00467Q9BRT7 94 aa4.91□□□□□ -1.62
DEFB1-201ENST00000297439 CHTOPQ9Y3Y2 248 aaKnown RBP4.91□□□□□ -1.62
DEFB1-201ENST00000297439 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.9□□□□□ -1.62
DEFB1-201ENST00000297439 TRGV11A0A075B6L2 103 aa4.9□□□□□ -1.63
DEFB1-201ENST00000297439 IGHV1OR15-1A0A075B7D0 117 aa4.9□□□□□ -1.63
DEFB1-201ENST00000297439 A0A1B0GWB2 263 aa4.9□□□□□ -1.63
DEFB1-201ENST00000297439 IGIPA6NJ69 53 aa4.9□□□□□ -1.63
DEFB1-201ENST00000297439 OR11H12B2RN74 326 aa4.9□□□□□ -1.63
DEFB1-201ENST00000297439 K7EP34 96 aa4.9□□□□□ -1.63
DEFB1-201ENST00000297439 GNRH2O43555 120 aa4.9□□□□□ -1.63
DEFB1-201ENST00000297439 TGFAP01135 160 aa4.9□□□□□ -1.63
DEFB1-201ENST00000297439 CRYBA4P53673 196 aa4.9□□□□□ -1.63
DEFB1-201ENST00000297439 TMEM95Q3KNT9 176 aa4.9□□□□□ -1.63
DEFB1-201ENST00000297439 AMMECR1LQ6DCA0 310 aa4.9□□□□□ -1.63
DEFB1-201ENST00000297439 Q6ZVH6 145 aa4.9□□□□□ -1.63
DEFB1-201ENST00000297439 OR11H1Q8NG94 326 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms