RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 PKIAP61925 76 aa10.05□□□□□ -0.8
CHMP4C-201ENST00000297265 SPINK13Q1W4C9 94 aa10.05□□□□□ -0.8
CHMP4C-201ENST00000297265 SPANXN1Q5VSR9 72 aa10.05□□□□□ -0.8
CHMP4C-201ENST00000297265 SPATA12Q7Z6I5 190 aa10.05□□□□□ -0.8
CHMP4C-201ENST00000297265 FN1P02751 2386 aaKnown RBP10.05□□□□□ -0.8
CHMP4C-201ENST00000297265 INAFM1C9JVW0 142 aa10.04□□□□□ -0.8
CHMP4C-201ENST00000297265 PPBPP02775 128 aa10.04□□□□□ -0.8
CHMP4C-201ENST00000297265 LEPP41159 167 aa10.04□□□□□ -0.8
CHMP4C-201ENST00000297265 KRTAP10-3P60369 221 aa10.04□□□□□ -0.8
CHMP4C-201ENST00000297265 PRSS3P2Q8NHM4 247 aa10.04□□□□□ -0.8
CHMP4C-201ENST00000297265 AP5S1Q9NUS5 200 aa10.04□□□□□ -0.8
CHMP4C-201ENST00000297265 TIMM8BQ9Y5J9 83 aaPredicted RBP10.04□□□□□ -0.8
CHMP4C-201ENST00000297265 RBMY1BA6NDE4 496 aaKnown RBP10.04□□□□□ -0.8
CHMP4C-201ENST00000297265 RBMY1EA6NEQ0 496 aaKnown RBP10.04□□□□□ -0.8
CHMP4C-201ENST00000297265 H3BMM0 161 aa10.04□□□□□ -0.8
CHMP4C-201ENST00000297265 CRXO43186 299 aaPredicted RBP10.04□□□□□ -0.8
CHMP4C-201ENST00000297265 TCF21O43680 179 aa10.04□□□□□ -0.8
CHMP4C-201ENST00000297265 DUSP14O95147 198 aaKnown RBP10.04□□□□□ -0.8
CHMP4C-201ENST00000297265 RBMY1DP0C7P1 496 aaKnown RBP10.04□□□□□ -0.8
CHMP4C-201ENST00000297265 RBMY1A1P0DJD3 496 aaKnown RBP10.04□□□□□ -0.8
CHMP4C-201ENST00000297265 RBMY1CP0DJD4 496 aa10.04□□□□□ -0.8
CHMP4C-201ENST00000297265 RBMY1FQ15415 496 aaKnown RBP10.04□□□□□ -0.8
CHMP4C-201ENST00000297265 M0R381 172 aa10.03□□□□□ -0.8
CHMP4C-201ENST00000297265 NXPH4O95158 308 aa10.03□□□□□ -0.8
CHMP4C-201ENST00000297265 TNFRSF6BO95407 300 aa10.03□□□□□ -0.8
CHMP4C-201ENST00000297265 HLA-DRB4P13762 266 aa10.03□□□□□ -0.8
CHMP4C-201ENST00000297265 S100A4P26447 101 aaKnown RBP10.03□□□□□ -0.8
CHMP4C-201ENST00000297265 FAM159AQ6UWV7 190 aa10.03□□□□□ -0.8
CHMP4C-201ENST00000297265 DYNLRB2Q8TF09 96 aa10.03□□□□□ -0.8
CHMP4C-201ENST00000297265 MAP6D1Q9H9H5 199 aa10.03□□□□□ -0.8
CHMP4C-201ENST00000297265 HLA-DRB4X5D2U9 266 aa10.03□□□□□ -0.8
CHMP4C-201ENST00000297265 TRAV26-2A0A0B4J265 109 aa10.02□□□□□ -0.8
CHMP4C-201ENST00000297265 LINC01546A6NGU7 62 aa10.02□□□□□ -0.8
CHMP4C-201ENST00000297265 NRACQ8N912 160 aa10.02□□□□□ -0.8
CHMP4C-201ENST00000297265 PHLDA3Q9Y5J5 127 aa10.02□□□□□ -0.8
CHMP4C-201ENST00000297265 IGLV2-18A0A075B6J9 118 aa10.02□□□□□ -0.81
CHMP4C-201ENST00000297265 LEPROTL1O95214 131 aa10.02□□□□□ -0.81
CHMP4C-201ENST00000297265 BTF3P20290 206 aaKnown RBP10.02□□□□□ -0.81
CHMP4C-201ENST00000297265 SPAG8Q99932 426 aaPredicted RBP10.02□□□□□ -0.81
CHMP4C-201ENST00000297265 MDFICQ9P1T7 246 aa10.02□□□□□ -0.81
CHMP4C-201ENST00000297265 LAMTOR2Q9Y2Q5 125 aa10.02□□□□□ -0.81
CHMP4C-201ENST00000297265 KIF25-AS1Q9Y6Z4 181 aa10.02□□□□□ -0.81
CHMP4C-201ENST00000297265 IGHV3-16A0A0C4DH30 117 aa10.01□□□□□ -0.81
CHMP4C-201ENST00000297265 KIR2DL5BA0A0G2JN68 375 aa10.01□□□□□ -0.81
CHMP4C-201ENST00000297265 KIR2DL5BA0A0G2JPC4 375 aa10.01□□□□□ -0.81
CHMP4C-201ENST00000297265 PRSS47A8MTI9 375 aa10.01□□□□□ -0.81
CHMP4C-201ENST00000297265 CD7P09564 240 aa10.01□□□□□ -0.81
CHMP4C-201ENST00000297265 TSPOP30536 169 aa10.01□□□□□ -0.81
CHMP4C-201ENST00000297265 LINC00315P59091 139 aa10.01□□□□□ -0.81
CHMP4C-201ENST00000297265 FA2HQ7L5A8 372 aa10.01□□□□□ -0.81
CHMP4C-201ENST00000297265 KIR2DL5AQ8N109 375 aa10.01□□□□□ -0.81
CHMP4C-201ENST00000297265 Q8N1Y9 231 aa10.01□□□□□ -0.81
CHMP4C-201ENST00000297265 DEFB125Q8N687 156 aa10.01□□□□□ -0.81
CHMP4C-201ENST00000297265 JMJD8Q96S16 334 aa10.01□□□□□ -0.81
CHMP4C-201ENST00000297265 TRAV25A0A0B4J276 109 aa10□□□□□ -0.81
CHMP4C-201ENST00000297265 FXYD7P58549 80 aa10□□□□□ -0.81
CHMP4C-201ENST00000297265 ODF3L2Q3SX64 289 aa10□□□□□ -0.81
CHMP4C-201ENST00000297265 C14orf178Q8N769 122 aaPredicted RBP10□□□□□ -0.81
CHMP4C-201ENST00000297265 C9orf85Q96MD7 179 aa10□□□□□ -0.81
CHMP4C-201ENST00000297265 C2CD3Q4AC94 2353 aa10□□□□□ -0.81
CHMP4C-201ENST00000297265 TSTD3H0UI37 97 aa10□□□□□ -0.81
CHMP4C-201ENST00000297265 POM121L12Q8N7R1 296 aa10□□□□□ -0.81
CHMP4C-201ENST00000297265 OR2K2Q8NGT1 345 aa10□□□□□ -0.81
CHMP4C-201ENST00000297265 TMEM70Q9BUB7 260 aa10□□□□□ -0.81
CHMP4C-201ENST00000297265 ZNF747Q9BV97 191 aa10□□□□□ -0.81
CHMP4C-201ENST00000297265 IGHV1OR15-1A0A075B7D0 117 aa9.99□□□□□ -0.81
CHMP4C-201ENST00000297265 SYS1-DBNDD2H3BUS1 97 aa9.99□□□□□ -0.81
CHMP4C-201ENST00000297265 DDTP30046 118 aa9.99□□□□□ -0.81
CHMP4C-201ENST00000297265 SMIM15Q7Z3B0 74 aa9.99□□□□□ -0.81
CHMP4C-201ENST00000297265 JPT2Q9H910 190 aa9.99□□□□□ -0.81
CHMP4C-201ENST00000297265 OR4C46A6NHA9 309 aa9.98□□□□□ -0.81
CHMP4C-201ENST00000297265 MAP1LC3AQ9H492 121 aa9.98□□□□□ -0.81
CHMP4C-201ENST00000297265 DPH3P1Q9H4G8 78 aa9.98□□□□□ -0.81
CHMP4C-201ENST00000297265 FOSL1P15407 271 aa9.98□□□□□ -0.81
CHMP4C-201ENST00000297265 RASL10AQ92737 203 aa9.98□□□□□ -0.81
CHMP4C-201ENST00000297265 MRAP2Q96G30 205 aa9.98□□□□□ -0.81
CHMP4C-201ENST00000297265 PAM16Q9Y3D7 125 aa9.98□□□□□ -0.81
CHMP4C-201ENST00000297265 NSUN5P1Q3KNT7 163 aa9.97□□□□□ -0.81
CHMP4C-201ENST00000297265 MAJINQ3KP22 176 aa9.97□□□□□ -0.81
CHMP4C-201ENST00000297265 ATOH7Q8N100 152 aa9.97□□□□□ -0.81
CHMP4C-201ENST00000297265 C20orf144Q9BQM9 153 aa9.97□□□□□ -0.81
CHMP4C-201ENST00000297265 TENM1Q9UKZ4 2725 aa9.96□□□□□ -0.81
CHMP4C-201ENST00000297265 PRM2P04554 102 aa9.96□□□□□ -0.81
CHMP4C-201ENST00000297265 CLUHP3Q96NS8 147 aa9.96□□□□□ -0.81
CHMP4C-201ENST00000297265 MCRIP2Q9BUT9 160 aaKnown RBP9.96□□□□□ -0.81
CHMP4C-201ENST00000297265 VAMP8Q9BV40 100 aa9.96□□□□□ -0.81
CHMP4C-201ENST00000297265 NXT2Q9NPJ8 142 aaKnown RBP9.96□□□□□ -0.81
CHMP4C-201ENST00000297265 VWFP04275 2813 aa9.96□□□□□ -0.82
CHMP4C-201ENST00000297265 IGLV1-51P01701 117 aa9.96□□□□□ -0.82
CHMP4C-201ENST00000297265 Q8N8P6 123 aa9.96□□□□□ -0.82
CHMP4C-201ENST00000297265 C14orf144Q96I85 54 aa9.96□□□□□ -0.82
CHMP4C-201ENST00000297265 HSPB8Q9UJY1 196 aa9.96□□□□□ -0.82
CHMP4C-201ENST00000297265 RPL39LQ96EH5 51 aaKnown RBP9.95□□□□□ -0.82
CHMP4C-201ENST00000297265 AP1S3Q96PC3 154 aa9.95□□□□□ -0.82
CHMP4C-201ENST00000297265 CRLF1O75462 422 aa9.94□□□□□ -0.82
CHMP4C-201ENST00000297265 HBDP02042 147 aa9.94□□□□□ -0.82
CHMP4C-201ENST00000297265 MAP1LC3CQ9BXW4 147 aa9.94□□□□□ -0.82
CHMP4C-201ENST00000297265 JMJD1CQ15652 2540 aa9.94□□□□□ -0.82
CHMP4C-201ENST00000297265 SAP30O75446 220 aa9.93□□□□□ -0.82
CHMP4C-201ENST00000297265 CRYGDP07320 174 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms