RNA–Protein interactions for RNA: ENST00000296930.9

NPM1-201, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-201ENST00000296930 TRAV12-2A0A075B6T6 113 aa11.62□□□□□ -0.55
NPM1-201ENST00000296930 RNASE4P34096 147 aaKnown RBP11.62□□□□□ -0.55
NPM1-201ENST00000296930 CT83Q5H943 113 aa11.62□□□□□ -0.55
NPM1-201ENST00000296930 OR2D3Q8NGH3 330 aa11.62□□□□□ -0.55
NPM1-201ENST00000296930 C7orf71A4D174 169 aa11.62□□□□□ -0.55
NPM1-201ENST00000296930 CRXO43186 299 aaPredicted RBP11.62□□□□□ -0.55
NPM1-201ENST00000296930 INSP01308 110 aa11.62□□□□□ -0.55
NPM1-201ENST00000296930 IL36BQ9NZH7 164 aa11.62□□□□□ -0.55
NPM1-201ENST00000296930 TRAV21A0A0B4J279 112 aa11.61□□□□□ -0.55
NPM1-201ENST00000296930 LINC01559Q495D7 138 aa11.61□□□□□ -0.55
NPM1-201ENST00000296930 ZNF575Q86XF7 245 aa11.61□□□□□ -0.55
NPM1-201ENST00000296930 YPEL4Q96NS1 127 aa11.61□□□□□ -0.55
NPM1-201ENST00000296930 URGCP-MRPS24S4R325 110 aa11.61□□□□□ -0.55
NPM1-201ENST00000296930 IGKV3D-20A0A0C4DH25 116 aa11.6□□□□□ -0.55
NPM1-201ENST00000296930 ZNF324O75467 553 aaPredicted RBP11.6□□□□□ -0.55
NPM1-201ENST00000296930 TRAV12-3A0A0B4J271 114 aa11.59□□□□□ -0.55
NPM1-201ENST00000296930 SMIM27A0A1W2PRY6 76 aa11.59□□□□□ -0.55
NPM1-201ENST00000296930 DAD1P61803 113 aa11.59□□□□□ -0.55
NPM1-201ENST00000296930 ELOBQ15370 118 aa11.59□□□□□ -0.55
NPM1-201ENST00000296930 LINC00336Q6ZUF6 198 aa11.59□□□□□ -0.55
NPM1-201ENST00000296930 TSKUQ8WUA8 353 aa11.59□□□□□ -0.55
NPM1-201ENST00000296930 IMMP2LQ96T52 175 aa11.59□□□□□ -0.55
NPM1-201ENST00000296930 TMSB15BA0A087X1C1 80 aa11.59□□□□□ -0.55
NPM1-201ENST00000296930 A8MWL6 223 aa11.59□□□□□ -0.55
NPM1-201ENST00000296930 ORM1P02763 201 aa11.59□□□□□ -0.55
NPM1-201ENST00000296930 GZMBP10144 247 aa11.59□□□□□ -0.55
NPM1-201ENST00000296930 HTN3P15516 51 aa11.59□□□□□ -0.55
NPM1-201ENST00000296930 FAM3BP58499 235 aaPredicted RBP11.59□□□□□ -0.55
NPM1-201ENST00000296930 GTSF1Q8WW33 167 aa11.59□□□□□ -0.55
NPM1-201ENST00000296930 HECTD4Q9Y4D8 3996 aa11.58□□□□□ -0.55
NPM1-201ENST00000296930 TCL1AP56279 114 aa11.58□□□□□ -0.56
NPM1-201ENST00000296930 LYRM9A8MSI8 78 aa11.57□□□□□ -0.56
NPM1-201ENST00000296930 MUC21Q5SSG8 566 aa11.57□□□□□ -0.56
NPM1-201ENST00000296930 UBE2DNLQ8IWF7 75 aa11.57□□□□□ -0.56
NPM1-201ENST00000296930 TMEM256Q8N2U0 113 aa11.57□□□□□ -0.56
NPM1-201ENST00000296930 NAGKQ9UJ70 344 aa11.57□□□□□ -0.56
NPM1-201ENST00000296930 S100PP25815 95 aa11.56□□□□□ -0.56
NPM1-201ENST00000296930 ANXA2RQ3ZCQ2 193 aa11.56□□□□□ -0.56
NPM1-201ENST00000296930 KCNIP4Q6PIL6 250 aa11.56□□□□□ -0.56
NPM1-201ENST00000296930 GFRA4Q9GZZ7 299 aa11.56□□□□□ -0.56
NPM1-201ENST00000296930 A0A1W2PPQ1 181 aa11.56□□□□□ -0.56
NPM1-201ENST00000296930 FAM231BA6NCW3 169 aa11.56□□□□□ -0.56
NPM1-201ENST00000296930 HIGD1CA8MV81 97 aa11.56□□□□□ -0.56
NPM1-201ENST00000296930 RPS20P60866 119 aaKnown RBP11.56□□□□□ -0.56
NPM1-201ENST00000296930 TGIF2-C20orf24A0A0A6YYL0 155 aa11.55□□□□□ -0.56
NPM1-201ENST00000296930 XKRY2A2RUG3 117 aa11.55□□□□□ -0.56
NPM1-201ENST00000296930 GRIFINA4D1Z8 144 aa11.55□□□□□ -0.56
NPM1-201ENST00000296930 COLCA2A8K830 154 aa11.55□□□□□ -0.56
NPM1-201ENST00000296930 PRM2P04554 102 aa11.55□□□□□ -0.56
NPM1-201ENST00000296930 CXCL1P09341 107 aa11.55□□□□□ -0.56
NPM1-201ENST00000296930 NUP35Q8NFH5 326 aa11.55□□□□□ -0.56
NPM1-201ENST00000296930 LINC01587Q99440 93 aa11.55□□□□□ -0.56
NPM1-201ENST00000296930 PYGO2Q9BRQ0 406 aa11.55□□□□□ -0.56
NPM1-201ENST00000296930 TRBV24-1A0A075B6N3 115 aa11.54□□□□□ -0.56
NPM1-201ENST00000296930 FOXA3P55318 350 aaPredicted RBP11.54□□□□□ -0.56
NPM1-201ENST00000296930 LGALS9BQ3B8N2 356 aa11.54□□□□□ -0.56
NPM1-201ENST00000296930 TDRG1Q3Y452 100 aa11.54□□□□□ -0.56
NPM1-201ENST00000296930 NAT8BQ9UHF3 227 aa11.54□□□□□ -0.56
NPM1-201ENST00000296930 M0R2N4 97 aa11.54□□□□□ -0.56
NPM1-201ENST00000296930 IGLC6P0CF74 106 aa11.54□□□□□ -0.56
NPM1-201ENST00000296930 FAM159AQ6UWV7 190 aa11.54□□□□□ -0.56
NPM1-201ENST00000296930 C15orf53Q8NAA6 179 aa11.54□□□□□ -0.56
NPM1-201ENST00000296930 C20orf144Q9BQM9 153 aa11.54□□□□□ -0.56
NPM1-201ENST00000296930 TRAV9-1A0A075B6T8 112 aa11.53□□□□□ -0.56
NPM1-201ENST00000296930 TYMSP04818 313 aa11.53□□□□□ -0.56
NPM1-201ENST00000296930 DEFB130BP0DP73 79 aa11.53□□□□□ -0.56
NPM1-201ENST00000296930 DEFB130AP0DP74 79 aa11.53□□□□□ -0.56
NPM1-201ENST00000296930 AZU1P20160 251 aa11.53□□□□□ -0.56
NPM1-201ENST00000296930 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.53□□□□□ -0.56
NPM1-201ENST00000296930 NACAE9PAV3 2078 aa11.52□□□□□ -0.56
NPM1-201ENST00000296930 IGHV1OR15-1A0A075B7D0 117 aa11.52□□□□□ -0.57
NPM1-201ENST00000296930 PLAC8L1A1L4L8 177 aa11.52□□□□□ -0.57
NPM1-201ENST00000296930 C16orf74Q96GX8 76 aa11.52□□□□□ -0.57
NPM1-201ENST00000296930 BTF3L4Q96K17 158 aa11.52□□□□□ -0.57
NPM1-201ENST00000296930 KCNS1Q96KK3 526 aa11.52□□□□□ -0.57
NPM1-201ENST00000296930 PGLYRP4Q96LB8 373 aa11.52□□□□□ -0.57
NPM1-201ENST00000296930 GNRH2O43555 120 aa11.51□□□□□ -0.57
NPM1-201ENST00000296930 SPINK4O60575 86 aa11.51□□□□□ -0.57
NPM1-201ENST00000296930 CTRLP40313 264 aa11.51□□□□□ -0.57
NPM1-201ENST00000296930 FER1L6-AS1Q8NA97 138 aa11.51□□□□□ -0.57
NPM1-201ENST00000296930 TP53TG3Q9ULZ0 132 aa11.51□□□□□ -0.57
NPM1-201ENST00000296930 HTN1P15515 57 aa11.51□□□□□ -0.57
NPM1-201ENST00000296930 DNLZQ5SXM8 178 aa11.51□□□□□ -0.57
NPM1-201ENST00000296930 LYZL1Q6UWQ5 148 aa11.51□□□□□ -0.57
NPM1-201ENST00000296930 ZNF493Q6ZR52 646 aa11.51□□□□□ -0.57
NPM1-201ENST00000296930 TPPP3Q9BW30 176 aa11.51□□□□□ -0.57
NPM1-201ENST00000296930 IGLV2-18A0A075B6J9 118 aa11.5□□□□□ -0.57
NPM1-201ENST00000296930 RTL8CO15255 209 aa11.5□□□□□ -0.57
NPM1-201ENST00000296930 ATP5G1P05496 136 aa11.5□□□□□ -0.57
NPM1-201ENST00000296930 RNASE3P12724 160 aaKnown RBP11.5□□□□□ -0.57
NPM1-201ENST00000296930 TIMM8BQ9Y5J9 83 aaPredicted RBP11.5□□□□□ -0.57
NPM1-201ENST00000296930 CBY3A6NI87 242 aa11.49□□□□□ -0.57
NPM1-201ENST00000296930 PRSS29PA6NIE9 313 aa11.49□□□□□ -0.57
NPM1-201ENST00000296930 H3BVH4 76 aa11.49□□□□□ -0.57
NPM1-201ENST00000296930 SNAI2O43623 268 aa11.49□□□□□ -0.57
NPM1-201ENST00000296930 ARMS2P0C7Q2 107 aa11.49□□□□□ -0.57
NPM1-201ENST00000296930 ASIPP42127 132 aa11.49□□□□□ -0.57
NPM1-201ENST00000296930 MRPL54Q6P161 138 aaKnown RBP11.49□□□□□ -0.57
NPM1-201ENST00000296930 Q6ZR54 194 aa11.49□□□□□ -0.57
NPM1-201ENST00000296930 TMEM263Q8WUH6 116 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms