RNA–Protein interactions for RNA: ENST00000281187.9

VPS26B-201, Transcript of VPS26, retromer complex component B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26B, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-201ENST00000281187 C11orf21Q9P2W6 132 aa10.97□□□□□ -0.65
VPS26B-201ENST00000281187 PRO1854Q9UHT4 67 aa10.97□□□□□ -0.65
VPS26B-201ENST00000281187 ZFHX4Q86UP3 3567 aa10.97□□□□□ -0.65
VPS26B-201ENST00000281187 IGF1P05019 195 aa10.96□□□□□ -0.65
VPS26B-201ENST00000281187 C3orf56Q8N813 242 aa10.96□□□□□ -0.65
VPS26B-201ENST00000281187 SPATA25Q9BR10 227 aa10.96□□□□□ -0.65
VPS26B-201ENST00000281187 TRAV8-4A0A0B4J246 113 aa10.96□□□□□ -0.66
VPS26B-201ENST00000281187 PAX8Q06710 450 aa10.96□□□□□ -0.66
VPS26B-201ENST00000281187 SMAD5-AS1Q9Y6J3 95 aa10.96□□□□□ -0.66
VPS26B-201ENST00000281187 MYO9AB2RTY4 2548 aa10.96□□□□□ -0.66
VPS26B-201ENST00000281187 TCL1BO95988 128 aa10.95□□□□□ -0.66
VPS26B-201ENST00000281187 TRPT1Q86TN4 253 aaKnown RBP10.95□□□□□ -0.66
VPS26B-201ENST00000281187 BAALCQ8WXS3 180 aa10.95□□□□□ -0.66
VPS26B-201ENST00000281187 BUB3O43684 328 aa10.95□□□□□ -0.66
VPS26B-201ENST00000281187 HOXB4P17483 251 aaPredicted RBP10.95□□□□□ -0.66
VPS26B-201ENST00000281187 SPXQ9BT56 116 aa10.95□□□□□ -0.66
VPS26B-201ENST00000281187 C11orf86A6NJI1 115 aa10.95□□□□□ -0.66
VPS26B-201ENST00000281187 PAPPA-AS1Q5QFB9 102 aa10.95□□□□□ -0.66
VPS26B-201ENST00000281187 VCX2Q9H322 139 aa10.95□□□□□ -0.66
VPS26B-201ENST00000281187 PTPN13Q12923 2485 aa10.95□□□□□ -0.66
VPS26B-201ENST00000281187 PTPRQQ9UMZ3 2332 aa10.94□□□□□ -0.66
VPS26B-201ENST00000281187 IGHV3-73A0A0B4J1V6 119 aa10.94□□□□□ -0.66
VPS26B-201ENST00000281187 DGAT2L7PQ6IED9 249 aa10.94□□□□□ -0.66
VPS26B-201ENST00000281187 PHLDA1Q8WV24 401 aaPredicted RBP10.94□□□□□ -0.66
VPS26B-201ENST00000281187 TCTEX1D4Q5JR98 221 aa10.94□□□□□ -0.66
VPS26B-201ENST00000281187 LINC00477Q96M19 166 aa10.94□□□□□ -0.66
VPS26B-201ENST00000281187 DMDP11532 3685 aa10.93□□□□□ -0.66
VPS26B-201ENST00000281187 PPP1R17O96001 155 aa10.93□□□□□ -0.66
VPS26B-201ENST00000281187 TMEM190Q8WZ59 177 aa10.93□□□□□ -0.66
VPS26B-201ENST00000281187 A4D1N5 150 aa10.93□□□□□ -0.66
VPS26B-201ENST00000281187 GAGE5Q13069 117 aa10.93□□□□□ -0.66
VPS26B-201ENST00000281187 GAGE6Q13070 117 aa10.93□□□□□ -0.66
VPS26B-201ENST00000281187 TMEM95Q3KNT9 176 aa10.93□□□□□ -0.66
VPS26B-201ENST00000281187 IGFL2Q6UWQ7 119 aa10.93□□□□□ -0.66
VPS26B-201ENST00000281187 C2orf82Q6UX34 121 aa10.93□□□□□ -0.66
VPS26B-201ENST00000281187 SMIM20Q8N5G0 67 aa10.93□□□□□ -0.66
VPS26B-201ENST00000281187 MAP1AP78559 2803 aaPredicted RBP10.93□□□□□ -0.66
VPS26B-201ENST00000281187 SDHAF1A6NFY7 115 aa10.93□□□□□ -0.66
VPS26B-201ENST00000281187 J3QQQ9 107 aa10.93□□□□□ -0.66
VPS26B-201ENST00000281187 MRPS12O15235 138 aaKnown RBP10.93□□□□□ -0.66
VPS26B-201ENST00000281187 GRNP28799 593 aaKnown RBP10.93□□□□□ -0.66
VPS26B-201ENST00000281187 PMVKQ15126 192 aa10.93□□□□□ -0.66
VPS26B-201ENST00000281187 GATD1Q8NB37 220 aa10.92□□□□□ -0.66
VPS26B-201ENST00000281187 JPT2Q9H910 190 aa10.92□□□□□ -0.66
VPS26B-201ENST00000281187 SETD2Q9BYW2 2564 aaPredicted RBP10.92□□□□□ -0.66
VPS26B-201ENST00000281187 TRBV7-3A0A075B6L6 115 aa10.91□□□□□ -0.66
VPS26B-201ENST00000281187 IGHV7-81A0A0B4J1V7 117 aa10.91□□□□□ -0.66
VPS26B-201ENST00000281187 CFAP126Q5VTH2 177 aa10.91□□□□□ -0.66
VPS26B-201ENST00000281187 NFE4Q86UQ8 179 aa10.91□□□□□ -0.66
VPS26B-201ENST00000281187 RNASE13Q5GAN3 156 aaKnown RBP10.91□□□□□ -0.66
VPS26B-201ENST00000281187 OPRPNQ99935 248 aaPredicted RBP10.91□□□□□ -0.66
VPS26B-201ENST00000281187 FOXC1Q12948 553 aa10.91□□□□□ -0.66
VPS26B-201ENST00000281187 MORN3Q6PF18 240 aaPredicted RBP10.91□□□□□ -0.66
VPS26B-201ENST00000281187 NDUFA11Q86Y39 141 aa10.91□□□□□ -0.66
VPS26B-201ENST00000281187 C10orf126Q8N4M7 172 aa10.9□□□□□ -0.66
VPS26B-201ENST00000281187 NRACQ8N912 160 aa10.9□□□□□ -0.66
VPS26B-201ENST00000281187 VCYO14598 125 aa10.9□□□□□ -0.66
VPS26B-201ENST00000281187 GATA3P23771 443 aa10.9□□□□□ -0.66
VPS26B-201ENST00000281187 ATMQ13315 3056 aa10.9□□□□□ -0.66
VPS26B-201ENST00000281187 C9orf139Q6ZV77 190 aa10.9□□□□□ -0.66
VPS26B-201ENST00000281187 ZMAT4Q9H898 229 aa10.9□□□□□ -0.66
VPS26B-201ENST00000281187 TRAV8-3A0A0A6YYJ7 113 aa10.89□□□□□ -0.67
VPS26B-201ENST00000281187 PLA2G2CQ5R387 149 aa10.89□□□□□ -0.67
VPS26B-201ENST00000281187 RASL10AQ92737 203 aa10.89□□□□□ -0.67
VPS26B-201ENST00000281187 SAA4P35542 130 aa10.89□□□□□ -0.67
VPS26B-201ENST00000281187 ZNF876PQ49A33 203 aa10.89□□□□□ -0.67
VPS26B-201ENST00000281187 C15orf53Q8NAA6 179 aa10.89□□□□□ -0.67
VPS26B-201ENST00000281187 BRD3OSQ6XYD6 125 aa10.89□□□□□ -0.67
VPS26B-201ENST00000281187 TOMM6Q96B49 74 aa10.89□□□□□ -0.67
VPS26B-201ENST00000281187 GAGE12JA6NER3 117 aa10.88□□□□□ -0.67
VPS26B-201ENST00000281187 GAGE7O76087 117 aa10.88□□□□□ -0.67
VPS26B-201ENST00000281187 GAGE12FP0CL80 117 aa10.88□□□□□ -0.67
VPS26B-201ENST00000281187 GAGE12GP0CL81 117 aa10.88□□□□□ -0.67
VPS26B-201ENST00000281187 GAGE12IP0CL82 117 aa10.88□□□□□ -0.67
VPS26B-201ENST00000281187 GAGE4Q13068 117 aa10.88□□□□□ -0.67
VPS26B-201ENST00000281187 ATXN8Q156A1 80 aa10.88□□□□□ -0.67
VPS26B-201ENST00000281187 CUL9Q8IWT3 2517 aa10.88□□□□□ -0.67
VPS26B-201ENST00000281187 TRAV12-1A0A0B4J245 112 aa10.88□□□□□ -0.67
VPS26B-201ENST00000281187 LINC01548A6NM66 108 aa10.88□□□□□ -0.67
VPS26B-201ENST00000281187 CFC1BP0CG36 223 aa10.88□□□□□ -0.67
VPS26B-201ENST00000281187 CFC1P0CG37 223 aa10.88□□□□□ -0.67
VPS26B-201ENST00000281187 CD28P10747 220 aa10.88□□□□□ -0.67
VPS26B-201ENST00000281187 Q6ZS46 218 aa10.88□□□□□ -0.67
VPS26B-201ENST00000281187 TRAV12-2A0A075B6T6 113 aa10.88□□□□□ -0.67
VPS26B-201ENST00000281187 IFITM1P13164 125 aa10.88□□□□□ -0.67
VPS26B-201ENST00000281187 NEXN-AS1Q8NBZ9 246 aa10.88□□□□□ -0.67
VPS26B-201ENST00000281187 NCOR2Q9Y618 2525 aa10.88□□□□□ -0.67
VPS26B-201ENST00000281187 ZNF625Q96I27 306 aaPredicted RBP10.87□□□□□ -0.67
VPS26B-201ENST00000281187 MUC6Q6W4X9 2439 aa10.87□□□□□ -0.67
VPS26B-201ENST00000281187 KHDC1LQ5JSQ8 128 aa10.87□□□□□ -0.67
VPS26B-201ENST00000281187 FAM110DQ8TAY7 271 aaPredicted RBP10.87□□□□□ -0.67
VPS26B-201ENST00000281187 MUC3AQ02505 3323 aa10.87□□□□□ -0.67
VPS26B-201ENST00000281187 TRAV41A0A0B4J266 112 aa10.87□□□□□ -0.67
VPS26B-201ENST00000281187 OVOL1O14753 267 aa10.87□□□□□ -0.67
VPS26B-201ENST00000281187 PIFOQ8TCI5 191 aa10.87□□□□□ -0.67
VPS26B-201ENST00000281187 ID1P41134 155 aa10.86□□□□□ -0.67
VPS26B-201ENST00000281187 MUSTN1Q8IVN3 82 aa10.86□□□□□ -0.67
VPS26B-201ENST00000281187 NPBQ8NG41 125 aa10.86□□□□□ -0.67
VPS26B-201ENST00000281187 H3BMM0 161 aa10.86□□□□□ -0.67
VPS26B-201ENST00000281187 M0R2P5 195 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms