RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 A0A1B0GUT8 65 aa10.97□□□□□ -0.65
TNFRSF11A-201ENST00000269485 SYNJ2BPP57105 145 aa10.97□□□□□ -0.65
TNFRSF11A-201ENST00000269485 MSRB1Q9NZV6 116 aa10.97□□□□□ -0.65
TNFRSF11A-201ENST00000269485 KLF5Q13887 457 aaPredicted RBP10.96□□□□□ -0.65
TNFRSF11A-201ENST00000269485 TRAV12-2A0A075B6T6 113 aa10.96□□□□□ -0.65
TNFRSF11A-201ENST00000269485 I3L2K1 104 aa10.96□□□□□ -0.65
TNFRSF11A-201ENST00000269485 MRPL32Q9BYC8 188 aaKnown RBP10.96□□□□□ -0.65
TNFRSF11A-201ENST00000269485 D6R8Y8 96 aa10.96□□□□□ -0.66
TNFRSF11A-201ENST00000269485 IGF1P05019 195 aa10.96□□□□□ -0.66
TNFRSF11A-201ENST00000269485 UBE2E1P51965 193 aa10.96□□□□□ -0.66
TNFRSF11A-201ENST00000269485 EMP1P54849 157 aa10.96□□□□□ -0.66
TNFRSF11A-201ENST00000269485 Q1RN00 199 aa10.96□□□□□ -0.66
TNFRSF11A-201ENST00000269485 ZC2HC1BQ5TFG8 222 aa10.96□□□□□ -0.66
TNFRSF11A-201ENST00000269485 LINC01545Q5VT33 79 aa10.96□□□□□ -0.66
TNFRSF11A-201ENST00000269485 IGHV3-73A0A0B4J1V6 119 aa10.95□□□□□ -0.66
TNFRSF11A-201ENST00000269485 NPIPB6E9PJ23 425 aa10.95□□□□□ -0.66
TNFRSF11A-201ENST00000269485 PGPEP1Q9NXJ5 209 aa10.95□□□□□ -0.66
TNFRSF11A-201ENST00000269485 IGHV1-69DA0A0B4J2H0 117 aa10.95□□□□□ -0.66
TNFRSF11A-201ENST00000269485 NDUFA3O95167 84 aa10.95□□□□□ -0.66
TNFRSF11A-201ENST00000269485 IGHV1-69P01742 117 aa10.95□□□□□ -0.66
TNFRSF11A-201ENST00000269485 PRM2P04554 102 aa10.95□□□□□ -0.66
TNFRSF11A-201ENST00000269485 RNASE4P34096 147 aaKnown RBP10.95□□□□□ -0.66
TNFRSF11A-201ENST00000269485 SPANXN1Q5VSR9 72 aa10.95□□□□□ -0.66
TNFRSF11A-201ENST00000269485 YAE1D1Q9NRH1 226 aa10.95□□□□□ -0.66
TNFRSF11A-201ENST00000269485 TRAV26-2A0A0B4J265 109 aa10.95□□□□□ -0.66
TNFRSF11A-201ENST00000269485 GAGE12JA6NER3 117 aa10.95□□□□□ -0.66
TNFRSF11A-201ENST00000269485 M0R1W7 72 aa10.95□□□□□ -0.66
TNFRSF11A-201ENST00000269485 GAGE7O76087 117 aa10.95□□□□□ -0.66
TNFRSF11A-201ENST00000269485 GAGE12FP0CL80 117 aa10.95□□□□□ -0.66
TNFRSF11A-201ENST00000269485 GAGE12GP0CL81 117 aa10.95□□□□□ -0.66
TNFRSF11A-201ENST00000269485 GAGE12IP0CL82 117 aa10.95□□□□□ -0.66
TNFRSF11A-201ENST00000269485 GAGE4Q13068 117 aa10.95□□□□□ -0.66
TNFRSF11A-201ENST00000269485 RASL11AQ6T310 242 aa10.95□□□□□ -0.66
TNFRSF11A-201ENST00000269485 GTSF1Q8WW33 167 aa10.95□□□□□ -0.66
TNFRSF11A-201ENST00000269485 MBD6Q96DN6 1003 aa10.95□□□□□ -0.66
TNFRSF11A-201ENST00000269485 KIR2DL4Q99706 377 aa10.95□□□□□ -0.66
TNFRSF11A-201ENST00000269485 SMR3AQ99954 134 aa10.95□□□□□ -0.66
TNFRSF11A-201ENST00000269485 RPL7P18124 248 aaKnown RBP10.94□□□□□ -0.66
TNFRSF11A-201ENST00000269485 MRGPRG-AS1Q2M3A8 158 aa10.94□□□□□ -0.66
TNFRSF11A-201ENST00000269485 TMEM78Q5T7P6 136 aa10.94□□□□□ -0.66
TNFRSF11A-201ENST00000269485 FOXI2Q6ZQN5 318 aa10.94□□□□□ -0.66
TNFRSF11A-201ENST00000269485 AMN1Q8IY45 258 aa10.94□□□□□ -0.66
TNFRSF11A-201ENST00000269485 WFDC11Q8NEX6 87 aa10.94□□□□□ -0.66
TNFRSF11A-201ENST00000269485 CTSGP08311 255 aa10.94□□□□□ -0.66
TNFRSF11A-201ENST00000269485 PAX8Q06710 450 aa10.94□□□□□ -0.66
TNFRSF11A-201ENST00000269485 CFHR4Q92496 578 aa10.94□□□□□ -0.66
TNFRSF11A-201ENST00000269485 EEF1AKMT3Q96AZ1 226 aa10.94□□□□□ -0.66
TNFRSF11A-201ENST00000269485 TRGV9Q99603 122 aa10.94□□□□□ -0.66
TNFRSF11A-201ENST00000269485 IGLL5B9A064 214 aa10.93□□□□□ -0.66
TNFRSF11A-201ENST00000269485 ATP5L2Q7Z4Y8 100 aa10.93□□□□□ -0.66
TNFRSF11A-201ENST00000269485 OR11H6Q8NGC7 330 aa10.93□□□□□ -0.66
TNFRSF11A-201ENST00000269485 IGKV2D-26A0A0A0MRZ7 120 aa10.93□□□□□ -0.66
TNFRSF11A-201ENST00000269485 HOXA3O43365 443 aaPredicted RBP10.93□□□□□ -0.66
TNFRSF11A-201ENST00000269485 GATA1P15976 413 aaPredicted RBP10.93□□□□□ -0.66
TNFRSF11A-201ENST00000269485 HBDP02042 147 aa10.93□□□□□ -0.66
TNFRSF11A-201ENST00000269485 XGP55808 180 aa10.93□□□□□ -0.66
TNFRSF11A-201ENST00000269485 RPL32P62910 135 aaKnown RBP10.93□□□□□ -0.66
TNFRSF11A-201ENST00000269485 LYZL1Q6UWQ5 148 aa10.92□□□□□ -0.66
TNFRSF11A-201ENST00000269485 LY6G5BQ8NDX9 201 aa10.92□□□□□ -0.66
TNFRSF11A-201ENST00000269485 ZNF502Q8TBZ5 544 aa10.92□□□□□ -0.66
TNFRSF11A-201ENST00000269485 B4DSR2 109 aa10.92□□□□□ -0.66
TNFRSF11A-201ENST00000269485 Q6ZUT4 128 aa10.92□□□□□ -0.66
TNFRSF11A-201ENST00000269485 SIRPDQ9H106 197 aa10.92□□□□□ -0.66
TNFRSF11A-201ENST00000269485 FOXI1Q12951 378 aa10.92□□□□□ -0.66
TNFRSF11A-201ENST00000269485 ZNF843Q8N446 348 aa10.92□□□□□ -0.66
TNFRSF11A-201ENST00000269485 TENM4Q6N022 2769 aa10.91□□□□□ -0.66
TNFRSF11A-201ENST00000269485 PSMG4Q5JS54 123 aa10.91□□□□□ -0.66
TNFRSF11A-201ENST00000269485 MRPL23Q16540 153 aaKnown RBP10.91□□□□□ -0.66
TNFRSF11A-201ENST00000269485 C12orf74Q32Q52 190 aa10.91□□□□□ -0.66
TNFRSF11A-201ENST00000269485 ERG28Q9UKR5 140 aa10.91□□□□□ -0.66
TNFRSF11A-201ENST00000269485 MOB4Q9Y3A3 225 aa10.91□□□□□ -0.66
TNFRSF11A-201ENST00000269485 OR11H12B2RN74 326 aa10.9□□□□□ -0.66
TNFRSF11A-201ENST00000269485 LY6LH3BQJ8 138 aa10.9□□□□□ -0.66
TNFRSF11A-201ENST00000269485 LEPP41159 167 aa10.9□□□□□ -0.66
TNFRSF11A-201ENST00000269485 OR11H1Q8NG94 326 aa10.9□□□□□ -0.66
TNFRSF11A-201ENST00000269485 OR11H2Q8NH07 326 aa10.9□□□□□ -0.66
TNFRSF11A-201ENST00000269485 IGF2BP2-AS1Q96M15 143 aa10.9□□□□□ -0.66
TNFRSF11A-201ENST00000269485 SHANK2-AS3Q9BTD1 123 aa10.9□□□□□ -0.66
TNFRSF11A-201ENST00000269485 TRBV19A0A075B6N1 114 aa10.9□□□□□ -0.66
TNFRSF11A-201ENST00000269485 MEIG1Q5JSS6 88 aa10.9□□□□□ -0.66
TNFRSF11A-201ENST00000269485 SPATA25Q9BR10 227 aa10.9□□□□□ -0.66
TNFRSF11A-201ENST00000269485 C18orf65Q6ZTR6 163 aa10.9□□□□□ -0.67
TNFRSF11A-201ENST00000269485 TRBV25-1A0A075B6N4 114 aa10.89□□□□□ -0.67
TNFRSF11A-201ENST00000269485 GP9P14770 177 aa10.89□□□□□ -0.67
TNFRSF11A-201ENST00000269485 C10orf105Q8TEF2 133 aa10.89□□□□□ -0.67
TNFRSF11A-201ENST00000269485 CRXO43186 299 aaPredicted RBP10.89□□□□□ -0.67
TNFRSF11A-201ENST00000269485 RHPN1-AS1Q9BWJ2 59 aa10.89□□□□□ -0.67
TNFRSF11A-201ENST00000269485 HIVEP1P15822 2718 aa10.88□□□□□ -0.67
TNFRSF11A-201ENST00000269485 TRAV12-3A0A0B4J271 114 aa10.88□□□□□ -0.67
TNFRSF11A-201ENST00000269485 LINC01549A6NIU2 74 aa10.88□□□□□ -0.67
TNFRSF11A-201ENST00000269485 KNCNA6PVL3 124 aa10.88□□□□□ -0.67
TNFRSF11A-201ENST00000269485 CCDC179H3BU77 68 aa10.88□□□□□ -0.67
TNFRSF11A-201ENST00000269485 SH2D1AO60880 128 aa10.88□□□□□ -0.67
TNFRSF11A-201ENST00000269485 Q86TA4 180 aa10.88□□□□□ -0.67
TNFRSF11A-201ENST00000269485 DLX4Q92988 240 aaPredicted RBP10.88□□□□□ -0.67
TNFRSF11A-201ENST00000269485 SIGLEC8Q9NYZ4 499 aa10.88□□□□□ -0.67
TNFRSF11A-201ENST00000269485 A8MWV9 139 aa10.88□□□□□ -0.67
TNFRSF11A-201ENST00000269485 FNDC10F2Z333 226 aa10.88□□□□□ -0.67
TNFRSF11A-201ENST00000269485 FGF6P10767 208 aa10.88□□□□□ -0.67
TNFRSF11A-201ENST00000269485 SRSF1Q07955 248 aaKnown RBP eCLIP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms