RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 S100A4P26447 101 aaKnown RBP10.35□□□□□ -0.75
SS18-201ENST00000269137 JOSD1Q15040 202 aaPredicted RBP10.35□□□□□ -0.75
SS18-201ENST00000269137 TWIST1Q15672 202 aa10.35□□□□□ -0.75
SS18-201ENST00000269137 TMEM256Q8N2U0 113 aa10.35□□□□□ -0.75
SS18-201ENST00000269137 MUC21A0A0G2JKD1 596 aa10.35□□□□□ -0.75
SS18-201ENST00000269137 MUC21A0A140T8X8 626 aa10.35□□□□□ -0.75
SS18-201ENST00000269137 NUTF2P61970 127 aaKnown RBP10.35□□□□□ -0.75
SS18-201ENST00000269137 OR10AG1Q8NH19 301 aa10.35□□□□□ -0.75
SS18-201ENST00000269137 RBMY1A1P0DJD3 496 aaKnown RBP10.34□□□□□ -0.75
SS18-201ENST00000269137 RBMY1CP0DJD4 496 aa10.34□□□□□ -0.75
SS18-201ENST00000269137 RNASE3P12724 160 aaKnown RBP10.34□□□□□ -0.75
SS18-201ENST00000269137 RBMY1FQ15415 496 aaKnown RBP10.34□□□□□ -0.75
SS18-201ENST00000269137 KIAA1644Q3SXP7 199 aa10.34□□□□□ -0.75
SS18-201ENST00000269137 IGHV3-16A0A0C4DH30 117 aa10.33□□□□□ -0.76
SS18-201ENST00000269137 LINC00587B1AMM8 73 aa10.33□□□□□ -0.76
SS18-201ENST00000269137 NUPR1O60356 82 aa10.33□□□□□ -0.76
SS18-201ENST00000269137 INSP01308 110 aa10.33□□□□□ -0.76
SS18-201ENST00000269137 IGLL1P15814 213 aa10.33□□□□□ -0.76
SS18-201ENST00000269137 Q0VG73 95 aa10.33□□□□□ -0.76
SS18-201ENST00000269137 GTSCR1Q86UQ5 136 aa10.33□□□□□ -0.76
SS18-201ENST00000269137 LINC00467Q9BRT7 94 aa10.33□□□□□ -0.76
SS18-201ENST00000269137 TMEM191AQ9H0A3 160 aa10.33□□□□□ -0.76
SS18-201ENST00000269137 WFDC10AQ9H1F0 79 aa10.33□□□□□ -0.76
SS18-201ENST00000269137 MSRB1Q9NZV6 116 aa10.33□□□□□ -0.76
SS18-201ENST00000269137 TP53TG3Q9ULZ0 132 aa10.33□□□□□ -0.76
SS18-201ENST00000269137 LOC102724200A0A096LPH7 203 aaPredicted RBP10.33□□□□□ -0.76
SS18-201ENST00000269137 SSTP61278 116 aa10.33□□□□□ -0.76
SS18-201ENST00000269137 DMRTA1Q5VZB9 504 aa10.33□□□□□ -0.76
SS18-201ENST00000269137 FAM104BQ5XKR9 115 aa10.33□□□□□ -0.76
SS18-201ENST00000269137 Q8N1Y9 231 aa10.33□□□□□ -0.76
SS18-201ENST00000269137 PHLDA3Q9Y5J5 127 aa10.33□□□□□ -0.76
SS18-201ENST00000269137 TRGV11A0A075B6L2 103 aa10.32□□□□□ -0.76
SS18-201ENST00000269137 ESDP10768 282 aa10.32□□□□□ -0.76
SS18-201ENST00000269137 SPANXN1Q5VSR9 72 aa10.32□□□□□ -0.76
SS18-201ENST00000269137 NXPH4O95158 308 aa10.31□□□□□ -0.76
SS18-201ENST00000269137 SRIP30626 198 aa10.31□□□□□ -0.76
SS18-201ENST00000269137 LINC00310P59036 64 aa10.31□□□□□ -0.76
SS18-201ENST00000269137 MORN3Q6PF18 240 aaPredicted RBP10.31□□□□□ -0.76
SS18-201ENST00000269137 C9orf85Q96MD7 179 aa10.31□□□□□ -0.76
SS18-201ENST00000269137 ALKBH7Q9BT30 221 aaPredicted RBP10.31□□□□□ -0.76
SS18-201ENST00000269137 XCL2Q9UBD3 114 aa10.31□□□□□ -0.76
SS18-201ENST00000269137 CMYA5Q8N3K9 4069 aa10.31□□□□□ -0.76
SS18-201ENST00000269137 MUC4Q99102 2169 aa10.31□□□□□ -0.76
SS18-201ENST00000269137 OR10J3Q5JRS4 329 aa10.3□□□□□ -0.76
SS18-201ENST00000269137 DEFB125Q8N687 156 aa10.3□□□□□ -0.76
SS18-201ENST00000269137 MDFICQ9P1T7 246 aa10.3□□□□□ -0.76
SS18-201ENST00000269137 TIMM8BQ9Y5J9 83 aaPredicted RBP10.3□□□□□ -0.76
SS18-201ENST00000269137 SERF1AO75920 110 aa10.3□□□□□ -0.76
SS18-201ENST00000269137 GIG44P09565 113 aaPredicted RBP10.3□□□□□ -0.76
SS18-201ENST00000269137 PRR31Q5SQ13 230 aa10.3□□□□□ -0.76
SS18-201ENST00000269137 SMIM15Q7Z3B0 74 aa10.3□□□□□ -0.76
SS18-201ENST00000269137 BAGE3Q86Y29 109 aa10.3□□□□□ -0.76
SS18-201ENST00000269137 CBY3A6NI87 242 aa10.29□□□□□ -0.76
SS18-201ENST00000269137 CTAG1AP78358 180 aa10.29□□□□□ -0.76
SS18-201ENST00000269137 AMN1Q8IY45 258 aa10.29□□□□□ -0.76
SS18-201ENST00000269137 LINC01587Q99440 93 aa10.29□□□□□ -0.76
SS18-201ENST00000269137 C1QTNF4Q9BXJ3 329 aa10.29□□□□□ -0.76
SS18-201ENST00000269137 ANK2Q01484 3957 aa10.29□□□□□ -0.76
SS18-201ENST00000269137 M0R381 172 aa10.28□□□□□ -0.76
SS18-201ENST00000269137 RPL35AP18077 110 aaKnown RBP10.28□□□□□ -0.76
SS18-201ENST00000269137 C1orf158Q8N1D5 194 aa10.28□□□□□ -0.76
SS18-201ENST00000269137 U3KQK5 164 aa10.28□□□□□ -0.76
SS18-201ENST00000269137 EVI2AP22794 236 aa10.28□□□□□ -0.76
SS18-201ENST00000269137 MRPL51Q4U2R6 128 aaKnown RBP10.28□□□□□ -0.76
SS18-201ENST00000269137 C18orf32Q8TCD1 76 aa10.28□□□□□ -0.76
SS18-201ENST00000269137 RNF185Q96GF1 192 aa10.28□□□□□ -0.76
SS18-201ENST00000269137 SPRY2O43597 315 aa10.27□□□□□ -0.77
SS18-201ENST00000269137 RAB4AP20338 218 aa10.27□□□□□ -0.77
SS18-201ENST00000269137 PKIAP61925 76 aa10.27□□□□□ -0.77
SS18-201ENST00000269137 PKD1L1Q8TDX9 2849 aa10.27□□□□□ -0.77
SS18-201ENST00000269137 TMEM208Q9BTX3 173 aa10.26□□□□□ -0.77
SS18-201ENST00000269137 PPBPP02775 128 aa10.26□□□□□ -0.77
SS18-201ENST00000269137 HTN1P15515 57 aa10.26□□□□□ -0.77
SS18-201ENST00000269137 IQCJQ1A5X6 159 aa10.26□□□□□ -0.77
SS18-201ENST00000269137 ORMDL3Q8N138 153 aa10.26□□□□□ -0.77
SS18-201ENST00000269137 SYT8Q8NBV8 401 aa10.26□□□□□ -0.77
SS18-201ENST00000269137 CSNK1G2-AS1Q8NCQ2 148 aa10.26□□□□□ -0.77
SS18-201ENST00000269137 PTH2Q96A98 100 aa10.26□□□□□ -0.77
SS18-201ENST00000269137 AP1S3Q96PC3 154 aa10.26□□□□□ -0.77
SS18-201ENST00000269137 CSTL1Q9H114 145 aa10.26□□□□□ -0.77
SS18-201ENST00000269137 GOLT1BQ9Y3E0 138 aa10.26□□□□□ -0.77
SS18-201ENST00000269137 D6R8Y8 96 aa10.25□□□□□ -0.77
SS18-201ENST00000269137 ZNF415Q09FC8 603 aa10.25□□□□□ -0.77
SS18-201ENST00000269137 DPH3P1Q9H4G8 78 aa10.25□□□□□ -0.77
SS18-201ENST00000269137 TSTD3H0UI37 97 aa10.24□□□□□ -0.77
SS18-201ENST00000269137 CKS2P33552 79 aa10.24□□□□□ -0.77
SS18-201ENST00000269137 PIK3CD-AS1Q5SR53 167 aa10.24□□□□□ -0.77
SS18-201ENST00000269137 C11orf72Q8NBR9 251 aa10.24□□□□□ -0.77
SS18-201ENST00000269137 PRM2P04554 102 aa10.23□□□□□ -0.77
SS18-201ENST00000269137 EGFEM1PQ0D2K5 195 aa10.23□□□□□ -0.77
SS18-201ENST00000269137 OXLD1Q5BKU9 147 aa10.23□□□□□ -0.77
SS18-201ENST00000269137 Q6ZWC4 215 aa10.23□□□□□ -0.77
SS18-201ENST00000269137 C14orf178Q8N769 122 aaPredicted RBP10.23□□□□□ -0.77
SS18-201ENST00000269137 PRELID3AQ96N28 172 aa10.23□□□□□ -0.77
SS18-201ENST00000269137 RCHY1Q96PM5 261 aa10.23□□□□□ -0.77
SS18-201ENST00000269137 SPXQ9BT56 116 aa10.23□□□□□ -0.77
SS18-201ENST00000269137 SAMD10Q9BYL1 202 aa10.23□□□□□ -0.77
SS18-201ENST00000269137 PRO1933Q9H354 126 aa10.23□□□□□ -0.77
SS18-201ENST00000269137 LAMTOR2Q9Y2Q5 125 aa10.23□□□□□ -0.77
SS18-201ENST00000269137 KIF25-AS1Q9Y6Z4 181 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms