RNA–Protein interactions for RNA: ENST00000254853.9

SLC52A1-201, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-201ENST00000254853 MED14OSP0DP75 135 aa12.88□□□□□ -0.35
SLC52A1-201ENST00000254853 ABCA2Q9BZC7 2435 aa12.88□□□□□ -0.35
SLC52A1-201ENST00000254853 IGHV4-38-2P0DP08 117 aa12.87□□□□□ -0.35
SLC52A1-201ENST00000254853 FOXI2Q6ZQN5 318 aa12.87□□□□□ -0.35
SLC52A1-201ENST00000254853 SPTBN4Q9H254 2564 aa12.87□□□□□ -0.35
SLC52A1-201ENST00000254853 AGRNO00468 2067 aa12.87□□□□□ -0.35
SLC52A1-201ENST00000254853 PRSS29PA6NIE9 313 aa12.87□□□□□ -0.35
SLC52A1-201ENST00000254853 PF4V1P10720 104 aa12.87□□□□□ -0.35
SLC52A1-201ENST00000254853 APRG1Q8IVJ8 170 aa12.87□□□□□ -0.35
SLC52A1-201ENST00000254853 USMG5Q96IX5 58 aa12.87□□□□□ -0.35
SLC52A1-201ENST00000254853 RHPN1-AS1Q9BWJ2 59 aa12.87□□□□□ -0.35
SLC52A1-201ENST00000254853 IGHV4-61A0A0C4DH41 118 aa12.86□□□□□ -0.35
SLC52A1-201ENST00000254853 LGALS1P09382 135 aaKnown RBP12.86□□□□□ -0.35
SLC52A1-201ENST00000254853 IGHG2P01859 326 aa12.86□□□□□ -0.35
SLC52A1-201ENST00000254853 SRD5A1P18405 259 aa12.86□□□□□ -0.35
SLC52A1-201ENST00000254853 Q6ZS46 218 aa12.86□□□□□ -0.35
SLC52A1-201ENST00000254853 LINC01619G3V211 115 aa12.85□□□□□ -0.35
SLC52A1-201ENST00000254853 BLCAPP62952 87 aa12.85□□□□□ -0.35
SLC52A1-201ENST00000254853 PRADC1Q9BSG0 188 aa12.85□□□□□ -0.35
SLC52A1-201ENST00000254853 CYSLTR1Q9Y271 337 aa12.85□□□□□ -0.35
SLC52A1-201ENST00000254853 H3BUX3 64 aa12.85□□□□□ -0.35
SLC52A1-201ENST00000254853 EDN2P20800 178 aa12.85□□□□□ -0.35
SLC52A1-201ENST00000254853 WFDC2Q14508 124 aa12.85□□□□□ -0.35
SLC52A1-201ENST00000254853 H3BUA1 57 aa12.84□□□□□ -0.35
SLC52A1-201ENST00000254853 LINC00315P59091 139 aa12.84□□□□□ -0.35
SLC52A1-201ENST00000254853 RRN3P1Q2M238 152 aa12.84□□□□□ -0.35
SLC52A1-201ENST00000254853 A6NDX4 124 aa12.84□□□□□ -0.35
SLC52A1-201ENST00000254853 H3BMG7 143 aa12.84□□□□□ -0.35
SLC52A1-201ENST00000254853 DUSP14O95147 198 aaKnown RBP12.84□□□□□ -0.35
SLC52A1-201ENST00000254853 BRI3O95415 125 aa12.84□□□□□ -0.35
SLC52A1-201ENST00000254853 AMTNQ6UX39 209 aa12.84□□□□□ -0.35
SLC52A1-201ENST00000254853 POM121L12Q8N7R1 296 aa12.84□□□□□ -0.35
SLC52A1-201ENST00000254853 DEFB104AQ8WTQ1 72 aa12.84□□□□□ -0.35
SLC52A1-201ENST00000254853 KIF25-AS1Q9Y6Z4 181 aa12.84□□□□□ -0.35
SLC52A1-201ENST00000254853 A0A1B0GWB2 263 aa12.83□□□□□ -0.36
SLC52A1-201ENST00000254853 NXPH4O95158 308 aa12.83□□□□□ -0.36
SLC52A1-201ENST00000254853 TRBV7-9A0A0J9YWB2 115 aa12.83□□□□□ -0.36
SLC52A1-201ENST00000254853 PPP1R17O96001 155 aa12.83□□□□□ -0.36
SLC52A1-201ENST00000254853 WFDC12Q8WWY7 111 aa12.83□□□□□ -0.36
SLC52A1-201ENST00000254853 JPT2Q9H910 190 aa12.83□□□□□ -0.36
SLC52A1-201ENST00000254853 F8W1H4 67 aa12.82□□□□□ -0.36
SLC52A1-201ENST00000254853 CRYGDP07320 174 aa12.82□□□□□ -0.36
SLC52A1-201ENST00000254853 MUC4Q99102 2169 aa12.82□□□□□ -0.36
SLC52A1-201ENST00000254853 ZNF815PA8K554 130 aa12.81□□□□□ -0.36
SLC52A1-201ENST00000254853 TSHBP01222 138 aa12.81□□□□□ -0.36
SLC52A1-201ENST00000254853 DAZ1Q9NQZ3 744 aaKnown RBP12.81□□□□□ -0.36
SLC52A1-201ENST00000254853 SPANXB1Q9NS25 103 aaPredicted RBP12.81□□□□□ -0.36
SLC52A1-201ENST00000254853 KLLNB2CW77 178 aa12.81□□□□□ -0.36
SLC52A1-201ENST00000254853 SCGB2A2Q13296 93 aa12.81□□□□□ -0.36
SLC52A1-201ENST00000254853 PLEKHB2Q96CS7 222 aa12.81□□□□□ -0.36
SLC52A1-201ENST00000254853 PIMREGQ9BSJ6 248 aa12.81□□□□□ -0.36
SLC52A1-201ENST00000254853 IGHV4OR15-8A0A075B7B6 117 aa12.8□□□□□ -0.36
SLC52A1-201ENST00000254853 A0A087WW49 117 aa12.8□□□□□ -0.36
SLC52A1-201ENST00000254853 IGLV1-40P01703 118 aa12.8□□□□□ -0.36
SLC52A1-201ENST00000254853 COX6B1P14854 86 aa12.8□□□□□ -0.36
SLC52A1-201ENST00000254853 SUMO4Q6EEV6 95 aa12.8□□□□□ -0.36
SLC52A1-201ENST00000254853 MORN3Q6PF18 240 aaPredicted RBP12.8□□□□□ -0.36
SLC52A1-201ENST00000254853 FAM159AQ6UWV7 190 aa12.8□□□□□ -0.36
SLC52A1-201ENST00000254853 MTURNQ8N3F0 131 aa12.8□□□□□ -0.36
SLC52A1-201ENST00000254853 TP53TG1Q9Y2A0 90 aa12.8□□□□□ -0.36
SLC52A1-201ENST00000254853 CELSR1Q9NYQ6 3014 aa12.8□□□□□ -0.36
SLC52A1-201ENST00000254853 SPTAN1Q13813 2472 aaKnown RBP12.79□□□□□ -0.36
SLC52A1-201ENST00000254853 A0A087WWL8 130 aa12.79□□□□□ -0.36
SLC52A1-201ENST00000254853 HOXA3O43365 443 aaPredicted RBP12.79□□□□□ -0.36
SLC52A1-201ENST00000254853 GNLYP22749 145 aa12.79□□□□□ -0.36
SLC52A1-201ENST00000254853 EMP1P54849 157 aa12.79□□□□□ -0.36
SLC52A1-201ENST00000254853 CD300EQ496F6 205 aaPredicted RBP12.79□□□□□ -0.36
SLC52A1-201ENST00000254853 KLHL30-AS1Q8NEE0 82 aa12.79□□□□□ -0.36
SLC52A1-201ENST00000254853 IGLV4-69A0A075B6H9 119 aa12.79□□□□□ -0.36
SLC52A1-201ENST00000254853 C11orf86A6NJI1 115 aa12.79□□□□□ -0.36
SLC52A1-201ENST00000254853 ZFP2Q6ZN57 461 aa12.79□□□□□ -0.36
SLC52A1-201ENST00000254853 SH2D6Q7Z4S9 175 aa12.79□□□□□ -0.36
SLC52A1-201ENST00000254853 TMEM238C9JI98 176 aa12.78□□□□□ -0.36
SLC52A1-201ENST00000254853 POLR2KP53803 58 aaKnown RBP12.78□□□□□ -0.36
SLC52A1-201ENST00000254853 SCGB1D4Q6XE38 83 aa12.78□□□□□ -0.36
SLC52A1-201ENST00000254853 C10orf105Q8TEF2 133 aa12.78□□□□□ -0.36
SLC52A1-201ENST00000254853 TRAV12-3A0A0B4J271 114 aa12.78□□□□□ -0.36
SLC52A1-201ENST00000254853 IGIPA6NJ69 53 aa12.78□□□□□ -0.36
SLC52A1-201ENST00000254853 RPL39P62891 51 aaKnown RBP12.78□□□□□ -0.36
SLC52A1-201ENST00000254853 RPL32P62910 135 aaKnown RBP12.78□□□□□ -0.36
SLC52A1-201ENST00000254853 CD7P09564 240 aa12.77□□□□□ -0.36
SLC52A1-201ENST00000254853 ETDBQ3ZM63 59 aa12.77□□□□□ -0.36
SLC52A1-201ENST00000254853 GAGE13Q4V321 117 aa12.77□□□□□ -0.36
SLC52A1-201ENST00000254853 DCANP1Q8TF63 244 aa12.77□□□□□ -0.36
SLC52A1-201ENST00000254853 PRO0461Q9UI25 63 aa12.77□□□□□ -0.36
SLC52A1-201ENST00000254853 VPS13CQ709C8 3753 aa12.77□□□□□ -0.37
SLC52A1-201ENST00000254853 F5H697 171 aa12.77□□□□□ -0.37
SLC52A1-201ENST00000254853 ID1P41134 155 aa12.77□□□□□ -0.37
SLC52A1-201ENST00000254853 PGPEP1Q9NXJ5 209 aa12.77□□□□□ -0.37
SLC52A1-201ENST00000254853 CFHR3Q02985 330 aa12.76□□□□□ -0.37
SLC52A1-201ENST00000254853 TMEM95Q3KNT9 176 aa12.76□□□□□ -0.37
SLC52A1-201ENST00000254853 VCYO14598 125 aa12.76□□□□□ -0.37
SLC52A1-201ENST00000254853 SRSF9Q13242 221 aaKnown RBP eCLIP12.76□□□□□ -0.37
SLC52A1-201ENST00000254853 PMVKQ15126 192 aa12.75□□□□□ -0.37
SLC52A1-201ENST00000254853 CCL19Q99731 98 aa12.75□□□□□ -0.37
SLC52A1-201ENST00000254853 TSSC4Q9Y5U2 329 aaPredicted RBP12.75□□□□□ -0.37
SLC52A1-201ENST00000254853 IGHV4-30-2A0A087WSY4 118 aa12.74□□□□□ -0.37
SLC52A1-201ENST00000254853 K7EMT4 169 aa12.74□□□□□ -0.37
SLC52A1-201ENST00000254853 MRPL16Q9NX20 251 aaKnown RBP12.74□□□□□ -0.37
SLC52A1-201ENST00000254853 SDHAF1A6NFY7 115 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms