RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 FLVCR1-AS1Q8TAF5 88 aa10.48□□□□□ -0.73
NEK9-201ENST00000238616 SPART-AS1P0CW21 52 aa10.48□□□□□ -0.73
NEK9-201ENST00000238616 FOXE3Q13461 319 aa10.48□□□□□ -0.73
NEK9-201ENST00000238616 SLC25A29Q8N8R3 303 aa10.48□□□□□ -0.73
NEK9-201ENST00000238616 MRPL35Q9NZE8 188 aaKnown RBP10.48□□□□□ -0.73
NEK9-201ENST00000238616 GAGE12HA6NDE8 117 aa10.47□□□□□ -0.73
NEK9-201ENST00000238616 ZC2HC1AQ96GY0 325 aa10.47□□□□□ -0.73
NEK9-201ENST00000238616 DEFB112Q30KQ8 113 aa10.47□□□□□ -0.73
NEK9-201ENST00000238616 MP68P56378 58 aa10.47□□□□□ -0.73
NEK9-201ENST00000238616 A0A1B0GW64 132 aa10.47□□□□□ -0.73
NEK9-201ENST00000238616 A0A1B0GX51 115 aa10.47□□□□□ -0.73
NEK9-201ENST00000238616 HHLA3Q9XRX5 114 aa10.47□□□□□ -0.73
NEK9-201ENST00000238616 PPDPFLQ8WWR9 84 aa10.47□□□□□ -0.73
NEK9-201ENST00000238616 TMEM190Q8WZ59 177 aa10.47□□□□□ -0.73
NEK9-201ENST00000238616 TRBV24-1A0A075B6N3 115 aa10.46□□□□□ -0.73
NEK9-201ENST00000238616 J3QQQ9 107 aa10.46□□□□□ -0.73
NEK9-201ENST00000238616 NDUFA4L2Q9NRX3 87 aa10.46□□□□□ -0.73
NEK9-201ENST00000238616 J3QRE1 110 aa10.46□□□□□ -0.73
NEK9-201ENST00000238616 SIGLEC8Q9NYZ4 499 aa10.46□□□□□ -0.73
NEK9-201ENST00000238616 NRGNQ92686 78 aa10.46□□□□□ -0.74
NEK9-201ENST00000238616 A0A0G2JRQ6 117 aa10.46□□□□□ -0.74
NEK9-201ENST00000238616 C9orf118A6NHY6 69 aa10.46□□□□□ -0.74
NEK9-201ENST00000238616 ELANEP08246 267 aa10.46□□□□□ -0.74
NEK9-201ENST00000238616 HIGD2BQ4VC39 106 aa10.46□□□□□ -0.74
NEK9-201ENST00000238616 F8W1H4 67 aa10.45□□□□□ -0.74
NEK9-201ENST00000238616 DLEU1O43261 78 aa10.45□□□□□ -0.74
NEK9-201ENST00000238616 HLA-DMBP28068 263 aa10.45□□□□□ -0.74
NEK9-201ENST00000238616 IGKV3D-7A0A0C4DH55 119 aa10.45□□□□□ -0.74
NEK9-201ENST00000238616 DYNAPQ8N1N2 210 aa10.45□□□□□ -0.74
NEK9-201ENST00000238616 TRBV19A0A075B6N1 114 aa10.45□□□□□ -0.74
NEK9-201ENST00000238616 MRPL23Q16540 153 aaKnown RBP10.45□□□□□ -0.74
NEK9-201ENST00000238616 DEFB135Q30KP9 77 aa10.45□□□□□ -0.74
NEK9-201ENST00000238616 ZNF833PQ6ZTB9 187 aa10.45□□□□□ -0.74
NEK9-201ENST00000238616 NREPQ16612 68 aa10.44□□□□□ -0.74
NEK9-201ENST00000238616 PRR25Q96S07 402 aa10.44□□□□□ -0.74
NEK9-201ENST00000238616 FOXI2Q6ZQN5 318 aa10.44□□□□□ -0.74
NEK9-201ENST00000238616 TRAV1-1A0A0B4J248 108 aa10.44□□□□□ -0.74
NEK9-201ENST00000238616 VOPP1Q96AW1 172 aa10.44□□□□□ -0.74
NEK9-201ENST00000238616 F8VRH5 84 aa10.44□□□□□ -0.74
NEK9-201ENST00000238616 DAND5Q8N907 189 aa10.44□□□□□ -0.74
NEK9-201ENST00000238616 C16orf74Q96GX8 76 aa10.44□□□□□ -0.74
NEK9-201ENST00000238616 ETDBQ3ZM63 59 aa10.43□□□□□ -0.74
NEK9-201ENST00000238616 DEFB113Q30KQ7 82 aa10.43□□□□□ -0.74
NEK9-201ENST00000238616 GPHB5Q86YW7 130 aa10.43□□□□□ -0.74
NEK9-201ENST00000238616 MYO9AB2RTY4 2548 aa10.43□□□□□ -0.74
NEK9-201ENST00000238616 ZNF664Q8N3J9 261 aa10.43□□□□□ -0.74
NEK9-201ENST00000238616 KLHDC3Q9BQ90 382 aa10.43□□□□□ -0.74
NEK9-201ENST00000238616 DIAPH2-AS1Q14236 149 aa10.43□□□□□ -0.74
NEK9-201ENST00000238616 Q6ZRM9 215 aa10.43□□□□□ -0.74
NEK9-201ENST00000238616 FNDC10F2Z333 226 aa10.43□□□□□ -0.74
NEK9-201ENST00000238616 COLCA2A8K830 154 aa10.43□□□□□ -0.74
NEK9-201ENST00000238616 K7EQD1 137 aa10.42□□□□□ -0.74
NEK9-201ENST00000238616 C17orf77Q96MU5 243 aa10.42□□□□□ -0.74
NEK9-201ENST00000238616 PYGO2Q9BRQ0 406 aa10.42□□□□□ -0.74
NEK9-201ENST00000238616 ZFP36P26651 326 aaKnown RBP10.42□□□□□ -0.74
NEK9-201ENST00000238616 YPEL3P61236 119 aaPredicted RBP10.42□□□□□ -0.74
NEK9-201ENST00000238616 IGLC2P0DOY2 106 aa10.42□□□□□ -0.74
NEK9-201ENST00000238616 IGLC3P0DOY3 106 aa10.42□□□□□ -0.74
NEK9-201ENST00000238616 RPL39LQ96EH5 51 aaKnown RBP10.42□□□□□ -0.74
NEK9-201ENST00000238616 DKK2Q9UBU2 259 aa10.42□□□□□ -0.74
NEK9-201ENST00000238616 IGKV2-24A0A0C4DH68 120 aa10.42□□□□□ -0.74
NEK9-201ENST00000238616 ATP6V0E2Q8NHE4 81 aa10.42□□□□□ -0.74
NEK9-201ENST00000238616 C18orf32Q8TCD1 76 aa10.42□□□□□ -0.74
NEK9-201ENST00000238616 SRSF2Q01130 221 aaKnown RBP10.41□□□□□ -0.74
NEK9-201ENST00000238616 C17orf58Q2M2W7 97 aa10.41□□□□□ -0.74
NEK9-201ENST00000238616 GOLGB1Q14789 3259 aaKnown RBP10.41□□□□□ -0.74
NEK9-201ENST00000238616 NDUFS7O75251 213 aa10.41□□□□□ -0.74
NEK9-201ENST00000238616 DAZ2Q13117 558 aaKnown RBP10.41□□□□□ -0.74
NEK9-201ENST00000238616 DAZ4Q86SG3 579 aaKnown RBP10.41□□□□□ -0.74
NEK9-201ENST00000238616 DAZ3Q9NR90 486 aaKnown RBP10.41□□□□□ -0.74
NEK9-201ENST00000238616 A0A1W2PPM0 123 aa10.41□□□□□ -0.74
NEK9-201ENST00000238616 TTC28Q96AY4 2481 aa10.4□□□□□ -0.74
NEK9-201ENST00000238616 CTSGP08311 255 aa10.4□□□□□ -0.74
NEK9-201ENST00000238616 PRSS33Q8NF86 280 aa10.4□□□□□ -0.74
NEK9-201ENST00000238616 NOTCH2Q04721 2471 aa10.4□□□□□ -0.74
NEK9-201ENST00000238616 A0A096LNI7 61 aa10.4□□□□□ -0.74
NEK9-201ENST00000238616 LTAP01374 205 aa10.4□□□□□ -0.74
NEK9-201ENST00000238616 LHFPL1Q86WI0 220 aa10.4□□□□□ -0.74
NEK9-201ENST00000238616 SPTSSBQ8NFR3 76 aa10.4□□□□□ -0.74
NEK9-201ENST00000238616 H3BRN7 92 aa10.4□□□□□ -0.74
NEK9-201ENST00000238616 IGHV4-38-2P0DP08 117 aa10.4□□□□□ -0.74
NEK9-201ENST00000238616 ZFP2Q6ZN57 461 aa10.4□□□□□ -0.74
NEK9-201ENST00000238616 LY96Q9Y6Y9 160 aa10.4□□□□□ -0.74
NEK9-201ENST00000238616 IGLV3-9A0A075B6K5 115 aa10.4□□□□□ -0.75
NEK9-201ENST00000238616 B3GALT5-AS1P59052 145 aa10.4□□□□□ -0.75
NEK9-201ENST00000238616 SND1-IT1Q9HBX3 110 aa10.4□□□□□ -0.75
NEK9-201ENST00000238616 IGKV1-6A0A0C4DH72 117 aa10.39□□□□□ -0.75
NEK9-201ENST00000238616 KLK12Q9UKR0 248 aa10.39□□□□□ -0.75
NEK9-201ENST00000238616 ZNF493Q6ZR52 646 aa10.39□□□□□ -0.75
NEK9-201ENST00000238616 GRNP28799 593 aaKnown RBP10.39□□□□□ -0.75
NEK9-201ENST00000238616 B9D2Q9BPU9 175 aa10.39□□□□□ -0.75
NEK9-201ENST00000238616 IGHV2-5P01817 119 aa10.38□□□□□ -0.75
NEK9-201ENST00000238616 POLR3KQ9Y2Y1 108 aaPredicted RBP10.38□□□□□ -0.75
NEK9-201ENST00000238616 SMIM27A0A1W2PRY6 76 aa10.38□□□□□ -0.75
NEK9-201ENST00000238616 KLF2Q9Y5W3 355 aaPredicted RBP10.38□□□□□ -0.75
NEK9-201ENST00000238616 CYTL1Q9NRR1 136 aa10.38□□□□□ -0.75
NEK9-201ENST00000238616 THSD7BQ9C0I4 1608 aa10.38□□□□□ -0.75
NEK9-201ENST00000238616 LYPD3O95274 346 aa10.38□□□□□ -0.75
NEK9-201ENST00000238616 CACNA1AO00555 2505 aa10.38□□□□□ -0.75
NEK9-201ENST00000238616 PIEZO2Q9H5I5 2752 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms