RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 TEP1Q99973 2627 aaKnown RBP11.79□□□□□ -0.52
CTSD-201ENST00000236671 K7ERJ3 54 aa11.79□□□□□ -0.52
CTSD-201ENST00000236671 COTL1Q14019 142 aa11.79□□□□□ -0.52
CTSD-201ENST00000236671 SAMD5Q5TGI4 173 aa11.79□□□□□ -0.52
CTSD-201ENST00000236671 PHLDA1Q8WV24 401 aaPredicted RBP11.79□□□□□ -0.52
CTSD-201ENST00000236671 SMIM2Q9BVW6 85 aa11.79□□□□□ -0.52
CTSD-201ENST00000236671 TM2D2Q9BX73 214 aa11.79□□□□□ -0.52
CTSD-201ENST00000236671 CSPG4Q6UVK1 2322 aa11.79□□□□□ -0.52
CTSD-201ENST00000236671 FABP2P12104 132 aa11.78□□□□□ -0.52
CTSD-201ENST00000236671 ARL3P36405 182 aa11.78□□□□□ -0.52
CTSD-201ENST00000236671 CRIP2P52943 208 aaPredicted RBP11.78□□□□□ -0.52
CTSD-201ENST00000236671 UNQ9165/PRO28630Q6UXU0 137 aa11.78□□□□□ -0.52
CTSD-201ENST00000236671 NEGR1Q7Z3B1 354 aa11.78□□□□□ -0.52
CTSD-201ENST00000236671 ZFAND2AQ8N6M9 145 aa11.78□□□□□ -0.52
CTSD-201ENST00000236671 CEND1Q8N111 149 aa11.78□□□□□ -0.52
CTSD-201ENST00000236671 MAPKAPK5-AS1Q8N8E1 139 aa11.78□□□□□ -0.52
CTSD-201ENST00000236671 ABCA2Q9BZC7 2435 aa11.78□□□□□ -0.52
CTSD-201ENST00000236671 SOCS3O14543 225 aa11.77□□□□□ -0.52
CTSD-201ENST00000236671 TRBV12-3P01733 135 aa11.77□□□□□ -0.52
CTSD-201ENST00000236671 IGHV4-39P01824 125 aa11.77□□□□□ -0.52
CTSD-201ENST00000236671 IGHV3OR16-10A0A075B7F0 116 aa11.77□□□□□ -0.53
CTSD-201ENST00000236671 J3KRW8 73 aa11.77□□□□□ -0.53
CTSD-201ENST00000236671 PLNP26678 52 aa11.77□□□□□ -0.53
CTSD-201ENST00000236671 LINC00477Q96M19 166 aa11.77□□□□□ -0.53
CTSD-201ENST00000236671 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.76□□□□□ -0.53
CTSD-201ENST00000236671 RASL10AQ92737 203 aa11.76□□□□□ -0.53
CTSD-201ENST00000236671 TRAV12-1A0A0B4J245 112 aa11.75□□□□□ -0.53
CTSD-201ENST00000236671 M0R381 172 aa11.75□□□□□ -0.53
CTSD-201ENST00000236671 SPRY2O43597 315 aa11.75□□□□□ -0.53
CTSD-201ENST00000236671 DEFB1P60022 68 aa11.75□□□□□ -0.53
CTSD-201ENST00000236671 TRAV21A0A0B4J279 112 aa11.75□□□□□ -0.53
CTSD-201ENST00000236671 G3V4G9 280 aa11.75□□□□□ -0.53
CTSD-201ENST00000236671 NDUFA4O00483 81 aa11.75□□□□□ -0.53
CTSD-201ENST00000236671 ATP5J2P56134 94 aa11.75□□□□□ -0.53
CTSD-201ENST00000236671 SUMO2P61956 95 aaKnown RBP11.75□□□□□ -0.53
CTSD-201ENST00000236671 NHP2Q9NX24 153 aaKnown RBP11.75□□□□□ -0.53
CTSD-201ENST00000236671 F8VRH5 84 aa11.74□□□□□ -0.53
CTSD-201ENST00000236671 OVOL1O14753 267 aa11.74□□□□□ -0.53
CTSD-201ENST00000236671 ORMDL2Q53FV1 153 aa11.74□□□□□ -0.53
CTSD-201ENST00000236671 OR10J6PQ8NGY7 276 aa11.74□□□□□ -0.53
CTSD-201ENST00000236671 TOMM6Q96B49 74 aa11.74□□□□□ -0.53
CTSD-201ENST00000236671 FAM19A4Q96LR4 140 aa11.74□□□□□ -0.53
CTSD-201ENST00000236671 CSTL1Q9H114 145 aa11.74□□□□□ -0.53
CTSD-201ENST00000236671 RNF223E7ERA6 249 aa11.74□□□□□ -0.53
CTSD-201ENST00000236671 H7C1H1 209 aa11.74□□□□□ -0.53
CTSD-201ENST00000236671 SLC25A16P16260 332 aa11.74□□□□□ -0.53
CTSD-201ENST00000236671 RPL39LQ96EH5 51 aaKnown RBP11.74□□□□□ -0.53
CTSD-201ENST00000236671 C20orf78Q9BR46 151 aa11.74□□□□□ -0.53
CTSD-201ENST00000236671 DPH3P1Q9H4G8 78 aa11.74□□□□□ -0.53
CTSD-201ENST00000236671 IGHV1-69DA0A0B4J2H0 117 aa11.73□□□□□ -0.53
CTSD-201ENST00000236671 K7EMI3 77 aa11.73□□□□□ -0.53
CTSD-201ENST00000236671 IGHV1-69P01742 117 aa11.73□□□□□ -0.53
CTSD-201ENST00000236671 ASIPP42127 132 aa11.73□□□□□ -0.53
CTSD-201ENST00000236671 TAL2Q16559 108 aa11.73□□□□□ -0.53
CTSD-201ENST00000236671 DEFB113Q30KQ7 82 aa11.73□□□□□ -0.53
CTSD-201ENST00000236671 ANXA2RQ3ZCQ2 193 aa11.73□□□□□ -0.53
CTSD-201ENST00000236671 BRD3OSQ6XYD6 125 aa11.73□□□□□ -0.53
CTSD-201ENST00000236671 MXRA5Q9NR99 2828 aa11.73□□□□□ -0.53
CTSD-201ENST00000236671 C14orf178Q8N769 122 aaPredicted RBP11.72□□□□□ -0.53
CTSD-201ENST00000236671 MAPK1IP1LQ8NDC0 245 aa11.72□□□□□ -0.53
CTSD-201ENST00000236671 KLK15Q9H2R5 256 aa11.72□□□□□ -0.53
CTSD-201ENST00000236671 SONP18583 2426 aaKnown RBP11.72□□□□□ -0.53
CTSD-201ENST00000236671 MTORP42345 2549 aa11.72□□□□□ -0.53
CTSD-201ENST00000236671 MED14OSP0DP75 135 aa11.72□□□□□ -0.53
CTSD-201ENST00000236671 S100A4P26447 101 aaKnown RBP11.72□□□□□ -0.53
CTSD-201ENST00000236671 KRTAP1-3Q8IUG1 177 aa11.72□□□□□ -0.53
CTSD-201ENST00000236671 APRG1Q8IVJ8 170 aa11.72□□□□□ -0.53
CTSD-201ENST00000236671 NEXN-AS1Q8NBZ9 246 aa11.72□□□□□ -0.53
CTSD-201ENST00000236671 SCGB3A1Q96QR1 104 aa11.72□□□□□ -0.53
CTSD-201ENST00000236671 CHTOPQ9Y3Y2 248 aaKnown RBP11.72□□□□□ -0.53
CTSD-201ENST00000236671 PHLDA3Q9Y5J5 127 aa11.72□□□□□ -0.53
CTSD-201ENST00000236671 CR1P17927 2039 aa11.71□□□□□ -0.53
CTSD-201ENST00000236671 NIPBLQ6KC79 2804 aaeCLIP11.71□□□□□ -0.53
CTSD-201ENST00000236671 E9PLD3 99 aa11.71□□□□□ -0.53
CTSD-201ENST00000236671 RIPPLY3P57055 190 aa11.71□□□□□ -0.53
CTSD-201ENST00000236671 WFDC11Q8NEX6 87 aa11.71□□□□□ -0.53
CTSD-201ENST00000236671 F6UB75 175 aa11.71□□□□□ -0.54
CTSD-201ENST00000236671 RNASE4P34096 147 aaKnown RBP11.71□□□□□ -0.54
CTSD-201ENST00000236671 F8P00451 2351 aa11.71□□□□□ -0.54
CTSD-201ENST00000236671 TRBV7-3A0A075B6L6 115 aa11.7□□□□□ -0.54
CTSD-201ENST00000236671 IGLL5B9A064 214 aa11.7□□□□□ -0.54
CTSD-201ENST00000236671 BRI3O95415 125 aa11.7□□□□□ -0.54
CTSD-201ENST00000236671 IGHV3-11P01762 117 aa11.69□□□□□ -0.54
CTSD-201ENST00000236671 MGPP08493 103 aa11.69□□□□□ -0.54
CTSD-201ENST00000236671 RNASE3P12724 160 aaKnown RBP11.69□□□□□ -0.54
CTSD-201ENST00000236671 USMG5Q96IX5 58 aa11.69□□□□□ -0.54
CTSD-201ENST00000236671 IGHV4-30-2A0A087WSY4 118 aa11.69□□□□□ -0.54
CTSD-201ENST00000236671 OR11H12B2RN74 326 aa11.69□□□□□ -0.54
CTSD-201ENST00000236671 LINC01619G3V211 115 aa11.69□□□□□ -0.54
CTSD-201ENST00000236671 H3BUA1 57 aa11.69□□□□□ -0.54
CTSD-201ENST00000236671 GNRH2O43555 120 aa11.69□□□□□ -0.54
CTSD-201ENST00000236671 C12orf74Q32Q52 190 aa11.69□□□□□ -0.54
CTSD-201ENST00000236671 Q5PR19 223 aa11.69□□□□□ -0.54
CTSD-201ENST00000236671 C2orf66Q6UXQ4 117 aa11.69□□□□□ -0.54
CTSD-201ENST00000236671 OR11H1Q8NG94 326 aa11.69□□□□□ -0.54
CTSD-201ENST00000236671 OR11H2Q8NH07 326 aa11.69□□□□□ -0.54
CTSD-201ENST00000236671 BAALCQ8WXS3 180 aa11.69□□□□□ -0.54
CTSD-201ENST00000236671 MYMXA0A1B0GTQ4 84 aa11.68□□□□□ -0.54
CTSD-201ENST00000236671 IGHG2P01859 326 aa11.68□□□□□ -0.54
CTSD-201ENST00000236671 LY6EQ16553 131 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms