RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 ORMDL3Q8N138 153 aa17.49■□□□□ 0.39
RRP9-201ENST00000232888 C19orf73Q9NVV2 129 aa17.49■□□□□ 0.39
RRP9-201ENST00000232888 INSP01308 110 aa17.48■□□□□ 0.39
RRP9-201ENST00000232888 FABP4P15090 132 aa17.48■□□□□ 0.39
RRP9-201ENST00000232888 FXYD7P58549 80 aa17.48■□□□□ 0.39
RRP9-201ENST00000232888 LINC00310P59036 64 aa17.48■□□□□ 0.39
RRP9-201ENST00000232888 ZNF747Q9BV97 191 aa17.48■□□□□ 0.39
RRP9-201ENST00000232888 TIMM8BQ9Y5J9 83 aaPredicted RBP17.48■□□□□ 0.39
RRP9-201ENST00000232888 AGRNO00468 2067 aa17.47■□□□□ 0.39
RRP9-201ENST00000232888 RAB4AP20338 218 aa17.47■□□□□ 0.39
RRP9-201ENST00000232888 Q8N1Y9 231 aa17.47■□□□□ 0.39
RRP9-201ENST00000232888 WFDC9Q8NEX5 89 aa17.47■□□□□ 0.39
RRP9-201ENST00000232888 C9orf85Q96MD7 179 aa17.47■□□□□ 0.39
RRP9-201ENST00000232888 RNF185Q96GF1 192 aa17.46■□□□□ 0.39
RRP9-201ENST00000232888 LAMTOR2Q9Y2Q5 125 aa17.46■□□□□ 0.39
RRP9-201ENST00000232888 NUPR1O60356 82 aa17.45■□□□□ 0.38
RRP9-201ENST00000232888 PRR31Q5SQ13 230 aa17.45■□□□□ 0.38
RRP9-201ENST00000232888 M0R381 172 aa17.45■□□□□ 0.38
RRP9-201ENST00000232888 CKS2P33552 79 aa17.45■□□□□ 0.38
RRP9-201ENST00000232888 IQCJQ1A5X6 159 aa17.45■□□□□ 0.38
RRP9-201ENST00000232888 PRELID3AQ96N28 172 aa17.45■□□□□ 0.38
RRP9-201ENST00000232888 D6R8Y8 96 aa17.44■□□□□ 0.38
RRP9-201ENST00000232888 RBMY1A1P0DJD3 496 aaKnown RBP17.44■□□□□ 0.38
RRP9-201ENST00000232888 RBMY1CP0DJD4 496 aa17.44■□□□□ 0.38
RRP9-201ENST00000232888 EVI2AP22794 236 aa17.44■□□□□ 0.38
RRP9-201ENST00000232888 RBMY1FQ15415 496 aaKnown RBP17.44■□□□□ 0.38
RRP9-201ENST00000232888 OR10D4PQ8NGN7 298 aa17.44■□□□□ 0.38
RRP9-201ENST00000232888 CHCHD1Q96BP2 118 aaKnown RBP17.44■□□□□ 0.38
RRP9-201ENST00000232888 RCHY1Q96PM5 261 aa17.44■□□□□ 0.38
RRP9-201ENST00000232888 CBY3A6NI87 242 aa17.43■□□□□ 0.38
RRP9-201ENST00000232888 SYT8Q8NBV8 401 aa17.43■□□□□ 0.38
RRP9-201ENST00000232888 AP1S3Q96PC3 154 aa17.43■□□□□ 0.38
RRP9-201ENST00000232888 SMIM6P0DI80 62 aa17.42■□□□□ 0.38
RRP9-201ENST00000232888 MORN3Q6PF18 240 aaPredicted RBP17.42■□□□□ 0.38
RRP9-201ENST00000232888 DPH3P1Q9H4G8 78 aa17.42■□□□□ 0.38
RRP9-201ENST00000232888 MDFICQ9P1T7 246 aa17.42■□□□□ 0.38
RRP9-201ENST00000232888 GTSCR1Q86UQ5 136 aa17.41■□□□□ 0.38
RRP9-201ENST00000232888 NIT1Q86X76 327 aa17.41■□□□□ 0.38
RRP9-201ENST00000232888 MRAP2Q96G30 205 aa17.41■□□□□ 0.38
RRP9-201ENST00000232888 SAMD10Q9BYL1 202 aa17.41■□□□□ 0.38
RRP9-201ENST00000232888 JMJD1CQ15652 2540 aa17.41■□□□□ 0.38
RRP9-201ENST00000232888 LINC01587Q99440 93 aa17.4■□□□□ 0.38
RRP9-201ENST00000232888 WIPF1O43516 503 aa17.4■□□□□ 0.38
RRP9-201ENST00000232888 SHISA2Q6UWI4 295 aa17.4■□□□□ 0.38
RRP9-201ENST00000232888 LINC00518Q8N0U6 118 aa17.4■□□□□ 0.38
RRP9-201ENST00000232888 TMEM158Q8WZ71 300 aa17.4■□□□□ 0.38
RRP9-201ENST00000232888 C1QTNF4Q9BXJ3 329 aa17.4■□□□□ 0.38
RRP9-201ENST00000232888 NIPBLQ6KC79 2804 aaeCLIP17.39■□□□□ 0.38
RRP9-201ENST00000232888 HSBP1O75506 76 aa17.39■□□□□ 0.37
RRP9-201ENST00000232888 LINC00614P0C842 121 aa17.39■□□□□ 0.37
RRP9-201ENST00000232888 PIK3CD-AS1Q5SR53 167 aa17.39■□□□□ 0.37
RRP9-201ENST00000232888 PTH2Q96A98 100 aa17.39■□□□□ 0.37
RRP9-201ENST00000232888 XCL2Q9UBD3 114 aa17.39■□□□□ 0.37
RRP9-201ENST00000232888 PMCHP20382 165 aa17.38■□□□□ 0.37
RRP9-201ENST00000232888 RNASEKQ6P5S7 137 aaKnown RBP17.38■□□□□ 0.37
RRP9-201ENST00000232888 PRIMA1Q86XR5 153 aa17.38■□□□□ 0.37
RRP9-201ENST00000232888 C3orf56Q8N813 242 aa17.38■□□□□ 0.37
RRP9-201ENST00000232888 ZNF415Q09FC8 603 aa17.37■□□□□ 0.37
RRP9-201ENST00000232888 POM121L12Q8N7R1 296 aa17.37■□□□□ 0.37
RRP9-201ENST00000232888 GSN-AS1Q9NRJ2 163 aa17.37■□□□□ 0.37
RRP9-201ENST00000232888 SMIM17P0DL12 118 aa17.36■□□□□ 0.37
RRP9-201ENST00000232888 AMTP48728 403 aa17.36■□□□□ 0.37
RRP9-201ENST00000232888 C14orf178Q8N769 122 aaPredicted RBP17.36■□□□□ 0.37
RRP9-201ENST00000232888 PRSS3P2Q8NHM4 247 aa17.36■□□□□ 0.37
RRP9-201ENST00000232888 SPATA3Q8NHX4 192 aa17.36■□□□□ 0.37
RRP9-201ENST00000232888 URB1-AS1Q96HZ7 61 aa17.36■□□□□ 0.37
RRP9-201ENST00000232888 TMEM208Q9BTX3 173 aa17.36■□□□□ 0.37
RRP9-201ENST00000232888 TEP1Q99973 2627 aaKnown RBP17.35■□□□□ 0.37
RRP9-201ENST00000232888 SPRY2O43597 315 aa17.35■□□□□ 0.37
RRP9-201ENST00000232888 C12orf54Q6X4T0 127 aa17.35■□□□□ 0.37
RRP9-201ENST00000232888 DEFB125Q8N687 156 aa17.35■□□□□ 0.37
RRP9-201ENST00000232888 SPXQ9BT56 116 aa17.35■□□□□ 0.37
RRP9-201ENST00000232888 MAP1LC3AQ9H492 121 aa17.35■□□□□ 0.37
RRP9-201ENST00000232888 KIF25-AS1Q9Y6Z4 181 aa17.35■□□□□ 0.37
RRP9-201ENST00000232888 SMKR1H3BMG3 65 aa17.34■□□□□ 0.37
RRP9-201ENST00000232888 PPP1R17O96001 155 aa17.34■□□□□ 0.37
RRP9-201ENST00000232888 NPYP01303 97 aa17.34■□□□□ 0.37
RRP9-201ENST00000232888 FA2HQ7L5A8 372 aa17.34■□□□□ 0.37
RRP9-201ENST00000232888 C1orf158Q8N1D5 194 aa17.34■□□□□ 0.37
RRP9-201ENST00000232888 WFDC10AQ9H1F0 79 aa17.34■□□□□ 0.37
RRP9-201ENST00000232888 GOLT1BQ9Y3E0 138 aa17.34■□□□□ 0.37
RRP9-201ENST00000232888 PRSS47A8MTI9 375 aa17.33■□□□□ 0.37
RRP9-201ENST00000232888 TNFRSF6BO95407 300 aa17.33■□□□□ 0.37
RRP9-201ENST00000232888 NCR2O95944 276 aa17.33■□□□□ 0.37
RRP9-201ENST00000232888 HTN1P15515 57 aa17.33■□□□□ 0.37
RRP9-201ENST00000232888 GIG44P09565 113 aaPredicted RBP17.32■□□□□ 0.36
RRP9-201ENST00000232888 NDUFAF3Q9BU61 184 aa17.32■□□□□ 0.36
RRP9-201ENST00000232888 AP5S1Q9NUS5 200 aa17.32■□□□□ 0.36
RRP9-201ENST00000232888 ATRQ13535 2644 aa17.32■□□□□ 0.36
RRP9-201ENST00000232888 M0R2P5 195 aa17.32■□□□□ 0.36
RRP9-201ENST00000232888 ZNF876PQ49A33 203 aa17.32■□□□□ 0.36
RRP9-201ENST00000232888 C12orf57Q99622 126 aa17.32■□□□□ 0.36
RRP9-201ENST00000232888 NXT2Q9NPJ8 142 aaKnown RBP17.32■□□□□ 0.36
RRP9-201ENST00000232888 RPL35AP18077 110 aaKnown RBP17.31■□□□□ 0.36
RRP9-201ENST00000232888 JOSD1Q15040 202 aaPredicted RBP17.31■□□□□ 0.36
RRP9-201ENST00000232888 C11orf72Q8NBR9 251 aa17.31■□□□□ 0.36
RRP9-201ENST00000232888 MUC4Q99102 2169 aa17.3■□□□□ 0.36
RRP9-201ENST00000232888 IGLL1P15814 213 aa17.3■□□□□ 0.36
RRP9-201ENST00000232888 IFI27P40305 119 aaPredicted RBP17.3■□□□□ 0.36
RRP9-201ENST00000232888 LINC00315P59091 139 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms