RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 TIRAPP58753 221 aa8.99□□□□□ -0.97
LAMA4-201ENST00000230538 DAZ2Q13117 558 aaKnown RBP8.99□□□□□ -0.97
LAMA4-201ENST00000230538 MRPL23Q16540 153 aaKnown RBP8.99□□□□□ -0.97
LAMA4-201ENST00000230538 DAZ4Q86SG3 579 aaKnown RBP8.99□□□□□ -0.97
LAMA4-201ENST00000230538 Q8NFD4 153 aa8.99□□□□□ -0.97
LAMA4-201ENST00000230538 DAZ3Q9NR90 486 aaKnown RBP8.99□□□□□ -0.97
LAMA4-201ENST00000230538 IGHV4-30-2A0A087WSY4 118 aa8.99□□□□□ -0.97
LAMA4-201ENST00000230538 POLEQ07864 2286 aa8.99□□□□□ -0.97
LAMA4-201ENST00000230538 COX7A2LO14548 114 aa8.99□□□□□ -0.97
LAMA4-201ENST00000230538 RBM3P98179 157 aaKnown RBP8.99□□□□□ -0.97
LAMA4-201ENST00000230538 CCL25O15444 150 aa8.98□□□□□ -0.97
LAMA4-201ENST00000230538 SPART-AS1P0CW21 52 aa8.98□□□□□ -0.97
LAMA4-201ENST00000230538 FUSP35637 526 aaKnown RBP eCLIP8.98□□□□□ -0.97
LAMA4-201ENST00000230538 PLXNB3Q9ULL4 1909 aa8.98□□□□□ -0.97
LAMA4-201ENST00000230538 KRTAP27-1Q3LI81 207 aa8.98□□□□□ -0.97
LAMA4-201ENST00000230538 DOCK8Q8NF50 2099 aa8.98□□□□□ -0.97
LAMA4-201ENST00000230538 DOCK7Q96N67 2140 aa8.98□□□□□ -0.97
LAMA4-201ENST00000230538 IGLV11-55A0A075B6I3 123 aa8.98□□□□□ -0.97
LAMA4-201ENST00000230538 K7EIM0 57 aa8.98□□□□□ -0.97
LAMA4-201ENST00000230538 C16orf54Q6UWD8 224 aa8.98□□□□□ -0.97
LAMA4-201ENST00000230538 ZFP2Q6ZN57 461 aa8.98□□□□□ -0.97
LAMA4-201ENST00000230538 PRB1P04280 392 aa8.98□□□□□ -0.97
LAMA4-201ENST00000230538 TMEM258P61165 79 aa8.98□□□□□ -0.97
LAMA4-201ENST00000230538 LINC01545Q5VT33 79 aa8.98□□□□□ -0.97
LAMA4-201ENST00000230538 HEATR5AQ86XA9 2040 aa8.98□□□□□ -0.97
LAMA4-201ENST00000230538 ATP5G1P05496 136 aa8.97□□□□□ -0.97
LAMA4-201ENST00000230538 CCL18P55774 89 aa8.97□□□□□ -0.97
LAMA4-201ENST00000230538 BLCAPP62952 87 aa8.97□□□□□ -0.97
LAMA4-201ENST00000230538 HIST2H2BCQ6DN03 193 aa8.97□□□□□ -0.97
LAMA4-201ENST00000230538 COX7B2Q8TF08 81 aa8.97□□□□□ -0.97
LAMA4-201ENST00000230538 SND1-IT1Q9HBX3 110 aa8.97□□□□□ -0.97
LAMA4-201ENST00000230538 IGHV4-28A0A0C4DH34 117 aa8.97□□□□□ -0.97
LAMA4-201ENST00000230538 SH2D6Q7Z4S9 175 aa8.97□□□□□ -0.97
LAMA4-201ENST00000230538 LINC00173Q6ZV60 143 aa8.97□□□□□ -0.97
LAMA4-201ENST00000230538 MUSTN1Q8IVN3 82 aa8.97□□□□□ -0.97
LAMA4-201ENST00000230538 PLA2G2EQ9NZK7 142 aa8.97□□□□□ -0.97
LAMA4-201ENST00000230538 NUPR1O60356 82 aa8.96□□□□□ -0.97
LAMA4-201ENST00000230538 IGHG2P01859 326 aa8.96□□□□□ -0.97
LAMA4-201ENST00000230538 ACYP1P07311 99 aa8.96□□□□□ -0.97
LAMA4-201ENST00000230538 WT1P19544 449 aaPredicted RBP8.96□□□□□ -0.97
LAMA4-201ENST00000230538 MRPL36Q9P0J6 103 aaKnown RBP8.96□□□□□ -0.97
LAMA4-201ENST00000230538 KIF26AQ9ULI4 1882 aaPredicted RBP8.96□□□□□ -0.98
LAMA4-201ENST00000230538 SS18L2Q9UHA2 77 aa8.96□□□□□ -0.98
LAMA4-201ENST00000230538 DENND4CQ5VZ89 1909 aa8.96□□□□□ -0.98
LAMA4-201ENST00000230538 IGHV4OR15-8A0A075B7B6 117 aa8.96□□□□□ -0.98
LAMA4-201ENST00000230538 A0A087WW49 117 aa8.96□□□□□ -0.98
LAMA4-201ENST00000230538 C5orf56Q8N8D9 126 aa8.96□□□□□ -0.98
LAMA4-201ENST00000230538 CTSGP08311 255 aa8.96□□□□□ -0.98
LAMA4-201ENST00000230538 DOCK9Q9BZ29 2069 aa8.95□□□□□ -0.98
LAMA4-201ENST00000230538 MSRB1Q9NZV6 116 aa8.95□□□□□ -0.98
LAMA4-201ENST00000230538 A0A0J9YXV3 536 aa8.95□□□□□ -0.98
LAMA4-201ENST00000230538 IGFL2Q6UWQ7 119 aa8.95□□□□□ -0.98
LAMA4-201ENST00000230538 ESM1Q9NQ30 184 aa8.95□□□□□ -0.98
LAMA4-201ENST00000230538 F8W735 103 aaPredicted RBP8.95□□□□□ -0.98
LAMA4-201ENST00000230538 H0YGX0 51 aa8.95□□□□□ -0.98
LAMA4-201ENST00000230538 COL6A6A6NMZ7 2263 aa8.94□□□□□ -0.98
LAMA4-201ENST00000230538 IGLL5B9A064 214 aa8.94□□□□□ -0.98
LAMA4-201ENST00000230538 NCR3O14931 201 aa8.94□□□□□ -0.98
LAMA4-201ENST00000230538 PATE2Q6UY27 113 aa8.94□□□□□ -0.98
LAMA4-201ENST00000230538 EP300Q09472 2414 aaPredicted RBP8.94□□□□□ -0.98
LAMA4-201ENST00000230538 Q8N9W7 124 aa8.94□□□□□ -0.98
LAMA4-201ENST00000230538 NCKAP5O14513 1909 aa8.94□□□□□ -0.98
LAMA4-201ENST00000230538 ZNF407Q9C0G0 2248 aa8.94□□□□□ -0.98
LAMA4-201ENST00000230538 CHKB-CPT1BH3BT56 60 aa8.94□□□□□ -0.98
LAMA4-201ENST00000230538 IGKV1-17P01599 117 aa8.94□□□□□ -0.98
LAMA4-201ENST00000230538 Q8N1Y9 231 aa8.94□□□□□ -0.98
LAMA4-201ENST00000230538 DEFB125Q8N687 156 aa8.94□□□□□ -0.98
LAMA4-201ENST00000230538 TIMM17AQ99595 171 aa8.94□□□□□ -0.98
LAMA4-201ENST00000230538 WI2-2373I1.2A0A1W2PRP0 233 aa8.93□□□□□ -0.98
LAMA4-201ENST00000230538 C5orf47Q569G3 176 aa8.93□□□□□ -0.98
LAMA4-201ENST00000230538 OPRPNQ99935 248 aaPredicted RBP8.93□□□□□ -0.98
LAMA4-201ENST00000230538 SPTBN1Q01082 2364 aaKnown RBP8.93□□□□□ -0.98
LAMA4-201ENST00000230538 HHLA3Q9XRX5 114 aa8.93□□□□□ -0.98
LAMA4-201ENST00000230538 A4D1N5 150 aa8.93□□□□□ -0.98
LAMA4-201ENST00000230538 C10orf105Q8TEF2 133 aa8.93□□□□□ -0.98
LAMA4-201ENST00000230538 VSIG2Q96IQ7 327 aa8.93□□□□□ -0.98
LAMA4-201ENST00000230538 KIR2DL5BA0A0G2JN68 375 aa8.93□□□□□ -0.98
LAMA4-201ENST00000230538 KIR2DL5BA0A0G2JPC4 375 aa8.93□□□□□ -0.98
LAMA4-201ENST00000230538 KIR2DL5AQ8N109 375 aa8.93□□□□□ -0.98
LAMA4-201ENST00000230538 SPANXCQ9NY87 97 aa8.93□□□□□ -0.98
LAMA4-201ENST00000230538 DIDO1Q9BTC0 2240 aaKnown RBP8.93□□□□□ -0.98
LAMA4-201ENST00000230538 C2orf70A6NJV1 201 aa8.92□□□□□ -0.98
LAMA4-201ENST00000230538 CLPSL1A2RUU4 121 aa8.92□□□□□ -0.98
LAMA4-201ENST00000230538 RPL39P62891 51 aaKnown RBP8.92□□□□□ -0.98
LAMA4-201ENST00000230538 TRBV7-3A0A075B6L6 115 aa8.92□□□□□ -0.98
LAMA4-201ENST00000230538 TDRG1Q3Y452 100 aa8.92□□□□□ -0.98
LAMA4-201ENST00000230538 CADP27708 2225 aa8.92□□□□□ -0.98
LAMA4-201ENST00000230538 EML6Q6ZMW3 1958 aa8.92□□□□□ -0.98
LAMA4-201ENST00000230538 NDUFB1O75438 58 aa8.92□□□□□ -0.98
LAMA4-201ENST00000230538 C9orf47Q6ZRZ4 202 aa8.92□□□□□ -0.98
LAMA4-201ENST00000230538 A0A0B4J2C4 111 aa8.92□□□□□ -0.98
LAMA4-201ENST00000230538 PRAC2D3DTV9 90 aa8.92□□□□□ -0.98
LAMA4-201ENST00000230538 BAALCQ8WXS3 180 aa8.92□□□□□ -0.98
LAMA4-201ENST00000230538 H3BQ85 93 aa8.91□□□□□ -0.98
LAMA4-201ENST00000230538 NDUFA1O15239 70 aa8.91□□□□□ -0.98
LAMA4-201ENST00000230538 ANKRD39Q53RE8 183 aa8.91□□□□□ -0.98
LAMA4-201ENST00000230538 DAND5Q8N907 189 aa8.91□□□□□ -0.98
LAMA4-201ENST00000230538 UBE2AP49459 152 aa8.91□□□□□ -0.98
LAMA4-201ENST00000230538 TOMM6Q96B49 74 aa8.91□□□□□ -0.98
LAMA4-201ENST00000230538 USF3Q68DE3 2245 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms