RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 TGFAP01135 160 aa13.48□□□□□ -0.25
CDKN1B-201ENST00000228872 LYNX1P0DP58 116 aa13.48□□□□□ -0.25
CDKN1B-201ENST00000228872 ACACBO00763 2458 aa13.48□□□□□ -0.25
CDKN1B-201ENST00000228872 A0A0J9YY99 117 aa13.47□□□□□ -0.25
CDKN1B-201ENST00000228872 NHLRC4P0CG21 123 aaPredicted RBP13.47□□□□□ -0.25
CDKN1B-201ENST00000228872 HES1Q14469 280 aa13.47□□□□□ -0.25
CDKN1B-201ENST00000228872 B5MCH6 92 aa13.47□□□□□ -0.25
CDKN1B-201ENST00000228872 CFC1BP0CG36 223 aa13.47□□□□□ -0.25
CDKN1B-201ENST00000228872 CFC1P0CG37 223 aa13.47□□□□□ -0.25
CDKN1B-201ENST00000228872 RPL39LQ96EH5 51 aaKnown RBP13.47□□□□□ -0.25
CDKN1B-201ENST00000228872 DPM3Q9P2X0 92 aa13.47□□□□□ -0.25
CDKN1B-201ENST00000228872 SPTBN1Q01082 2364 aaKnown RBP13.46□□□□□ -0.25
CDKN1B-201ENST00000228872 BUB3O43684 328 aa13.46□□□□□ -0.26
CDKN1B-201ENST00000228872 SRD5A1P18405 259 aa13.46□□□□□ -0.26
CDKN1B-201ENST00000228872 IGHV3-66A0A0C4DH42 116 aa13.45□□□□□ -0.26
CDKN1B-201ENST00000228872 RNF223E7ERA6 249 aa13.45□□□□□ -0.26
CDKN1B-201ENST00000228872 C10orf126Q8N4M7 172 aa13.45□□□□□ -0.26
CDKN1B-201ENST00000228872 AJUBAQ96IF1 538 aa13.45□□□□□ -0.26
CDKN1B-201ENST00000228872 USP24Q9UPU5 2620 aa13.44□□□□□ -0.26
CDKN1B-201ENST00000228872 TRAV8-2A0A0B4J237 113 aa13.44□□□□□ -0.26
CDKN1B-201ENST00000228872 IGHV3-30P01768 117 aa13.44□□□□□ -0.26
CDKN1B-201ENST00000228872 SCGB1C2P0DMR2 95 aa13.44□□□□□ -0.26
CDKN1B-201ENST00000228872 IGHV3-30-5P0DP03 117 aa13.44□□□□□ -0.26
CDKN1B-201ENST00000228872 Q6ZS46 218 aa13.44□□□□□ -0.26
CDKN1B-201ENST00000228872 C11orf86A6NJI1 115 aa13.44□□□□□ -0.26
CDKN1B-201ENST00000228872 CRYGDP07320 174 aa13.44□□□□□ -0.26
CDKN1B-201ENST00000228872 C11orf71Q6IPW1 123 aa13.44□□□□□ -0.26
CDKN1B-201ENST00000228872 ZFAND3Q9H8U3 227 aa13.44□□□□□ -0.26
CDKN1B-201ENST00000228872 IGSF10Q6WRI0 2623 aa13.43□□□□□ -0.26
CDKN1B-201ENST00000228872 RHODO00212 210 aa13.43□□□□□ -0.26
CDKN1B-201ENST00000228872 SLC25A20O43772 301 aa13.43□□□□□ -0.26
CDKN1B-201ENST00000228872 IGLV4-69A0A075B6H9 119 aa13.42□□□□□ -0.26
CDKN1B-201ENST00000228872 HERVK_113P61574 105 aa13.42□□□□□ -0.26
CDKN1B-201ENST00000228872 M0R381 172 aa13.42□□□□□ -0.26
CDKN1B-201ENST00000228872 SPRY2O43597 315 aa13.42□□□□□ -0.26
CDKN1B-201ENST00000228872 C9orf47Q6ZRZ4 202 aa13.42□□□□□ -0.26
CDKN1B-201ENST00000228872 PRO1854Q9UHT4 67 aa13.42□□□□□ -0.26
CDKN1B-201ENST00000228872 CENPVL3A0A0U1RRI6 287 aa13.41□□□□□ -0.26
CDKN1B-201ENST00000228872 C19orf84I3L1E1 186 aa13.41□□□□□ -0.26
CDKN1B-201ENST00000228872 PRTN3P24158 256 aa13.41□□□□□ -0.26
CDKN1B-201ENST00000228872 PRR9Q5T870 116 aa13.41□□□□□ -0.26
CDKN1B-201ENST00000228872 IGHV3OR16-13A0A075B7E8 117 aa13.41□□□□□ -0.26
CDKN1B-201ENST00000228872 IGHV3-74A0A0B4J1X5 117 aa13.41□□□□□ -0.26
CDKN1B-201ENST00000228872 M0QXV9 152 aa13.41□□□□□ -0.26
CDKN1B-201ENST00000228872 DUSP14O95147 198 aaKnown RBP13.41□□□□□ -0.26
CDKN1B-201ENST00000228872 MRPL53Q96EL3 112 aaKnown RBP13.41□□□□□ -0.26
CDKN1B-201ENST00000228872 DPH3P1Q9H4G8 78 aa13.41□□□□□ -0.26
CDKN1B-201ENST00000228872 ASIPP42127 132 aa13.4□□□□□ -0.26
CDKN1B-201ENST00000228872 EMP1P54849 157 aa13.4□□□□□ -0.26
CDKN1B-201ENST00000228872 NDUFV3P56181 108 aaKnown RBP13.4□□□□□ -0.26
CDKN1B-201ENST00000228872 TSPEAR-AS2P59090 65 aa13.4□□□□□ -0.26
CDKN1B-201ENST00000228872 GAGE2BQ13066 116 aa13.4□□□□□ -0.26
CDKN1B-201ENST00000228872 GAGE2EQ4V326 116 aa13.4□□□□□ -0.26
CDKN1B-201ENST00000228872 SLC25A29Q8N8R3 303 aa13.4□□□□□ -0.26
CDKN1B-201ENST00000228872 BBC3Q96PG8 261 aaPredicted RBP13.4□□□□□ -0.26
CDKN1B-201ENST00000228872 HIF1ANQ9NWT6 349 aa13.4□□□□□ -0.26
CDKN1B-201ENST00000228872 GAGE2DQ9UEU5 116 aa13.4□□□□□ -0.26
CDKN1B-201ENST00000228872 CLPSL1A2RUU4 121 aa13.4□□□□□ -0.26
CDKN1B-201ENST00000228872 C9JAW5 83 aa13.4□□□□□ -0.26
CDKN1B-201ENST00000228872 LY6HO94772 140 aa13.4□□□□□ -0.26
CDKN1B-201ENST00000228872 CRIP2P52943 208 aaPredicted RBP13.4□□□□□ -0.26
CDKN1B-201ENST00000228872 C14orf178Q8N769 122 aaPredicted RBP13.4□□□□□ -0.26
CDKN1B-201ENST00000228872 TSHBP01222 138 aa13.39□□□□□ -0.27
CDKN1B-201ENST00000228872 ARHGAP32A7KAX9 2087 aa13.39□□□□□ -0.27
CDKN1B-201ENST00000228872 TRAV4A0A0B4J268 109 aa13.39□□□□□ -0.27
CDKN1B-201ENST00000228872 MGPP08493 103 aa13.39□□□□□ -0.27
CDKN1B-201ENST00000228872 SNCGO76070 127 aa13.38□□□□□ -0.27
CDKN1B-201ENST00000228872 PAPPA-AS1Q5QFB9 102 aa13.38□□□□□ -0.27
CDKN1B-201ENST00000228872 LY6G5BQ8NDX9 201 aa13.38□□□□□ -0.27
CDKN1B-201ENST00000228872 ASH1LQ9NR48 2969 aaKnown RBP13.38□□□□□ -0.27
CDKN1B-201ENST00000228872 A0A1W2PPR1 153 aa13.38□□□□□ -0.27
CDKN1B-201ENST00000228872 TRPT1Q86TN4 253 aaKnown RBP13.38□□□□□ -0.27
CDKN1B-201ENST00000228872 TIMD4Q96H15 378 aa13.38□□□□□ -0.27
CDKN1B-201ENST00000228872 CRLF1O75462 422 aa13.37□□□□□ -0.27
CDKN1B-201ENST00000228872 ANXA2RQ3ZCQ2 193 aa13.37□□□□□ -0.27
CDKN1B-201ENST00000228872 IGHV3-49A0A0A0MS15 119 aa13.37□□□□□ -0.27
CDKN1B-201ENST00000228872 IGF1P05019 195 aa13.37□□□□□ -0.27
CDKN1B-201ENST00000228872 CLEC3BP05452 202 aa13.37□□□□□ -0.27
CDKN1B-201ENST00000228872 CACNA1BQ00975 2339 aa13.37□□□□□ -0.27
CDKN1B-201ENST00000228872 C15orf32Q32M92 178 aa13.37□□□□□ -0.27
CDKN1B-201ENST00000228872 GAGE12JA6NER3 117 aa13.36□□□□□ -0.27
CDKN1B-201ENST00000228872 CCDC179H3BU77 68 aa13.36□□□□□ -0.27
CDKN1B-201ENST00000228872 GAGE7O76087 117 aa13.36□□□□□ -0.27
CDKN1B-201ENST00000228872 PRB1P04280 392 aa13.36□□□□□ -0.27
CDKN1B-201ENST00000228872 GAGE12FP0CL80 117 aa13.36□□□□□ -0.27
CDKN1B-201ENST00000228872 GAGE12GP0CL81 117 aa13.36□□□□□ -0.27
CDKN1B-201ENST00000228872 GAGE12IP0CL82 117 aa13.36□□□□□ -0.27
CDKN1B-201ENST00000228872 GAGE4Q13068 117 aa13.36□□□□□ -0.27
CDKN1B-201ENST00000228872 RAX2Q96IS3 184 aa13.36□□□□□ -0.27
CDKN1B-201ENST00000228872 CFAP46Q8IYW2 2715 aa13.36□□□□□ -0.27
CDKN1B-201ENST00000228872 IGHV7-81A0A0B4J1V7 117 aa13.36□□□□□ -0.27
CDKN1B-201ENST00000228872 ODF3BA8MYP8 253 aa13.36□□□□□ -0.27
CDKN1B-201ENST00000228872 J3KRW8 73 aa13.36□□□□□ -0.27
CDKN1B-201ENST00000228872 ZNF843Q8N446 348 aa13.36□□□□□ -0.27
CDKN1B-201ENST00000228872 AMELXQ99217 191 aa13.36□□□□□ -0.27
CDKN1B-201ENST00000228872 IGHV1-69DA0A0B4J2H0 117 aa13.36□□□□□ -0.27
CDKN1B-201ENST00000228872 EIF4EBP3O60516 100 aaPredicted RBP13.36□□□□□ -0.27
CDKN1B-201ENST00000228872 GPHB5Q86YW7 130 aa13.36□□□□□ -0.27
CDKN1B-201ENST00000228872 Q8N6K4 173 aa13.36□□□□□ -0.27
CDKN1B-201ENST00000228872 TP53TG1Q9Y2A0 90 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms