RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 ZFYVE26Q68DK2 2539 aa13.06□□□□□ -0.32
USB1-201ENST00000219281 RPL24P83731 157 aaKnown RBP13.05□□□□□ -0.32
USB1-201ENST00000219281 C12orf74Q32Q52 190 aa13.05□□□□□ -0.32
USB1-201ENST00000219281 NEXN-AS1Q8NBZ9 246 aa13.05□□□□□ -0.32
USB1-201ENST00000219281 CELSR2Q9HCU4 2923 aa13.05□□□□□ -0.32
USB1-201ENST00000219281 USP24Q9UPU5 2620 aa13.05□□□□□ -0.32
USB1-201ENST00000219281 CSMD2Q7Z408 3487 aa13.05□□□□□ -0.32
USB1-201ENST00000219281 IGHV1-69DA0A0B4J2H0 117 aa13.05□□□□□ -0.32
USB1-201ENST00000219281 IGHV4-61A0A0C4DH41 118 aa13.05□□□□□ -0.32
USB1-201ENST00000219281 E9PLD3 99 aa13.05□□□□□ -0.32
USB1-201ENST00000219281 IGHV1-69P01742 117 aa13.05□□□□□ -0.32
USB1-201ENST00000219281 LY6EQ16553 131 aa13.05□□□□□ -0.32
USB1-201ENST00000219281 UTP20O75691 2785 aaKnown RBP13.04□□□□□ -0.32
USB1-201ENST00000219281 RNF223E7ERA6 249 aa13.04□□□□□ -0.32
USB1-201ENST00000219281 OR11H12B2RN74 326 aa13.04□□□□□ -0.32
USB1-201ENST00000219281 SLC25A16P16260 332 aa13.04□□□□□ -0.32
USB1-201ENST00000219281 C2orf66Q6UXQ4 117 aa13.04□□□□□ -0.32
USB1-201ENST00000219281 OR11H1Q8NG94 326 aa13.04□□□□□ -0.32
USB1-201ENST00000219281 OR11H2Q8NH07 326 aa13.04□□□□□ -0.32
USB1-201ENST00000219281 CCL19Q99731 98 aa13.04□□□□□ -0.32
USB1-201ENST00000219281 SPOCK3Q9BQ16 436 aa13.04□□□□□ -0.32
USB1-201ENST00000219281 MYMXA0A1B0GTQ4 84 aa13.03□□□□□ -0.32
USB1-201ENST00000219281 ZNF479Q96JC4 524 aa13.03□□□□□ -0.32
USB1-201ENST00000219281 FAM19A4Q96LR4 140 aa13.03□□□□□ -0.32
USB1-201ENST00000219281 BAALCQ8WXS3 180 aa13.02□□□□□ -0.32
USB1-201ENST00000219281 MYO18BQ8IUG5 2567 aa13.02□□□□□ -0.32
USB1-201ENST00000219281 TRBV7-3A0A075B6L6 115 aa13.02□□□□□ -0.33
USB1-201ENST00000219281 TEX48A0A1B0GUV7 120 aa13.02□□□□□ -0.33
USB1-201ENST00000219281 RNASE3P12724 160 aaKnown RBP13.02□□□□□ -0.33
USB1-201ENST00000219281 FOXI2Q6ZQN5 318 aa13.02□□□□□ -0.33
USB1-201ENST00000219281 LCNL1Q6ZST4 164 aa13.02□□□□□ -0.33
USB1-201ENST00000219281 C10orf105Q8TEF2 133 aa13.02□□□□□ -0.33
USB1-201ENST00000219281 PRB1P04280 392 aa13.01□□□□□ -0.33
USB1-201ENST00000219281 MED14OSP0DP75 135 aa13.01□□□□□ -0.33
USB1-201ENST00000219281 PF4V1P10720 104 aa13.01□□□□□ -0.33
USB1-201ENST00000219281 PRSS29PA6NIE9 313 aa13□□□□□ -0.33
USB1-201ENST00000219281 SRD5A1P18405 259 aa13□□□□□ -0.33
USB1-201ENST00000219281 USMG5Q96IX5 58 aa13□□□□□ -0.33
USB1-201ENST00000219281 IGHV4-38-2P0DP08 117 aa13□□□□□ -0.33
USB1-201ENST00000219281 PIMREGQ9BSJ6 248 aa13□□□□□ -0.33
USB1-201ENST00000219281 RHPN1-AS1Q9BWJ2 59 aa13□□□□□ -0.33
USB1-201ENST00000219281 CYSLTR1Q9Y271 337 aa13□□□□□ -0.33
USB1-201ENST00000219281 IGHV4-30-2A0A087WSY4 118 aa12.99□□□□□ -0.33
USB1-201ENST00000219281 LGALS1P09382 135 aaKnown RBP12.99□□□□□ -0.33
USB1-201ENST00000219281 BBC3Q96PG8 261 aaPredicted RBP12.99□□□□□ -0.33
USB1-201ENST00000219281 ATP5J2P56134 94 aa12.99□□□□□ -0.33
USB1-201ENST00000219281 WFDC2Q14508 124 aa12.99□□□□□ -0.33
USB1-201ENST00000219281 APRG1Q8IVJ8 170 aa12.99□□□□□ -0.33
USB1-201ENST00000219281 DEFB104AQ8WTQ1 72 aa12.99□□□□□ -0.33
USB1-201ENST00000219281 PRADC1Q9BSG0 188 aa12.99□□□□□ -0.33
USB1-201ENST00000219281 H3BMG7 143 aa12.98□□□□□ -0.33
USB1-201ENST00000219281 H3BUX3 64 aa12.98□□□□□ -0.33
USB1-201ENST00000219281 IGHG2P01859 326 aa12.98□□□□□ -0.33
USB1-201ENST00000219281 BLCAPP62952 87 aa12.98□□□□□ -0.33
USB1-201ENST00000219281 AMTNQ6UX39 209 aa12.98□□□□□ -0.33
USB1-201ENST00000219281 Q6ZS46 218 aa12.98□□□□□ -0.33
USB1-201ENST00000219281 LINC01619G3V211 115 aa12.97□□□□□ -0.33
USB1-201ENST00000219281 WFDC12Q8WWY7 111 aa12.97□□□□□ -0.33
USB1-201ENST00000219281 NRGNQ92686 78 aa12.97□□□□□ -0.33
USB1-201ENST00000219281 ZNF462Q96JM2 2506 aa12.97□□□□□ -0.33
USB1-201ENST00000219281 AGRNO00468 2067 aa12.97□□□□□ -0.33
USB1-201ENST00000219281 F8W1H4 67 aa12.97□□□□□ -0.33
USB1-201ENST00000219281 DUSP14O95147 198 aaKnown RBP12.97□□□□□ -0.33
USB1-201ENST00000219281 EDN2P20800 178 aa12.97□□□□□ -0.33
USB1-201ENST00000219281 RRN3P1Q2M238 152 aa12.97□□□□□ -0.33
USB1-201ENST00000219281 H3BUA1 57 aa12.96□□□□□ -0.33
USB1-201ENST00000219281 PPP1R17O96001 155 aa12.96□□□□□ -0.33
USB1-201ENST00000219281 SCGB2A2Q13296 93 aa12.96□□□□□ -0.33
USB1-201ENST00000219281 JPT2Q9H910 190 aa12.96□□□□□ -0.33
USB1-201ENST00000219281 NDUFS8O00217 210 aa12.96□□□□□ -0.34
USB1-201ENST00000219281 LINC00315P59091 139 aa12.96□□□□□ -0.34
USB1-201ENST00000219281 KIF25-AS1Q9Y6Z4 181 aa12.96□□□□□ -0.34
USB1-201ENST00000219281 A0A1B0GWB2 263 aa12.95□□□□□ -0.34
USB1-201ENST00000219281 A6NDX4 124 aa12.95□□□□□ -0.34
USB1-201ENST00000219281 ZNF815PA8K554 130 aa12.95□□□□□ -0.34
USB1-201ENST00000219281 CLEC2AQ6UVW9 174 aa12.95□□□□□ -0.34
USB1-201ENST00000219281 POM121L12Q8N7R1 296 aa12.95□□□□□ -0.34
USB1-201ENST00000219281 TRBV7-9A0A0J9YWB2 115 aa12.95□□□□□ -0.34
USB1-201ENST00000219281 HOXA3O43365 443 aaPredicted RBP12.95□□□□□ -0.34
USB1-201ENST00000219281 BRI3O95415 125 aa12.95□□□□□ -0.34
USB1-201ENST00000219281 CRYGDP07320 174 aa12.95□□□□□ -0.34
USB1-201ENST00000219281 PLEKHB2Q96CS7 222 aa12.95□□□□□ -0.34
USB1-201ENST00000219281 SPANXB1Q9NS25 103 aaPredicted RBP12.95□□□□□ -0.34
USB1-201ENST00000219281 NXPH4O95158 308 aa12.94□□□□□ -0.34
USB1-201ENST00000219281 FAM159AQ6UWV7 190 aa12.94□□□□□ -0.34
USB1-201ENST00000219281 DAZ1Q9NQZ3 744 aaKnown RBP12.94□□□□□ -0.34
USB1-201ENST00000219281 TP53TG1Q9Y2A0 90 aa12.94□□□□□ -0.34
USB1-201ENST00000219281 FBN2P35556 2912 aa12.94□□□□□ -0.34
USB1-201ENST00000219281 TSHBP01222 138 aa12.93□□□□□ -0.34
USB1-201ENST00000219281 CD300EQ496F6 205 aaPredicted RBP12.93□□□□□ -0.34
USB1-201ENST00000219281 SCGB1D4Q6XE38 83 aa12.93□□□□□ -0.34
USB1-201ENST00000219281 MTURNQ8N3F0 131 aa12.93□□□□□ -0.34
USB1-201ENST00000219281 A0A087WWL8 130 aa12.93□□□□□ -0.34
USB1-201ENST00000219281 KLLNB2CW77 178 aa12.93□□□□□ -0.34
USB1-201ENST00000219281 TMEM238C9JI98 176 aa12.93□□□□□ -0.34
USB1-201ENST00000219281 EMP1P54849 157 aa12.93□□□□□ -0.34
USB1-201ENST00000219281 SUMO4Q6EEV6 95 aa12.93□□□□□ -0.34
USB1-201ENST00000219281 SH2D6Q7Z4S9 175 aa12.93□□□□□ -0.34
USB1-201ENST00000219281 KLHL30-AS1Q8NEE0 82 aa12.93□□□□□ -0.34
USB1-201ENST00000219281 MORN3Q6PF18 240 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms