RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Olfr513Q8VFZ3 309 aa13.09□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 MmdQ9CQY7 238 aa13.09□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Asxl3Q8C4A5 2259 aa13.09□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Defa37K9J724 93 aa13.09□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Defa5P28312 93 aa13.09□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 4930474N05RikQ8BVR5 218 aa13.09□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Q0VG49 157 aa13.09□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Spred3Q6P6N5 408 aa13.09□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Gm20532G3UXR8 106 aa13.08□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Gm4791J3QQ14 102 aa13.08□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Wnt5aP22725 380 aa13.08□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Q8VE95 218 aa13.08□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Susd2Q9DBX3 820 aa13.08□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Tmub1Q9JMG3 245 aa13.08□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Rnf212F6TQD1 307 aa13.08□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Ins1P01325 108 aa13.08□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 TgfaP48030 159 aa13.08□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Efna2P52801 209 aa13.08□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Olfr149Q60888 311 aa13.08□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Stac2Q8R1B0 408 aa13.08□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Olfr1202Q8VF98 309 aa13.08□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Olfr123Q8VFQ1 309 aa13.08□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Trem3Q9JKE1 183 aa13.08□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Gm26920S4R2A5 56 aa13.08□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Ighv1-47A0A0A6YY41 117 aa13.08□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Ccl3P10855 92 aa13.08□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 SellP18337 372 aa13.08□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Med13Q5SWW4 2171 aa13.08□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Hist1h2bmP10854 126 aa13.08□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Cdx4Q07424 282 aa13.08□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Prss44Q402U7 372 aa13.08□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Hist1h2bhQ64478 126 aa13.08□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Hist2h2bbQ64525 126 aa13.08□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 SriQ6P069 198 aa13.08□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Hist1h2bcQ6ZWY9 126 aaKnown RBP13.08□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Kazald1Q8BJ66 313 aa13.08□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Mrpl20Q9CQL4 149 aa13.08□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Fam213bQ9DB60 201 aa13.08□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Sptbn2Q68FG2 2388 aa13.07□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Cd5P13379 494 aa13.07□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Gm9733Q1AN91 178 aa13.07□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Psg16Q8K0U8 395 aa13.07□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Mrps36Q9CQX8 102 aa13.07□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Phf7Q9DAG9 307 aa13.07□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 PigpQ9JHG1 132 aa13.07□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Ccl28Q9JIL2 130 aa13.07□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Col4a6B1AVK5 1691 aa13.07□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Tmem92B7ZWI3 162 aa13.07□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 P18532 116 aa13.07□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Zfp92Q62396 488 aa13.07□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Olfr1535Q7TQU0 326 aa13.07□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Prrg4Q8BGN6 226 aa13.07□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Tcrg-V4A0A0B4J1J8 138 aa13.07□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 P04212 136 aa13.07□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Mfge8P21956 463 aaKnown RBP13.07□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Plp1P60202 277 aa13.07□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Sdr39u1Q5M8N4 308 aa13.07□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Olfr968Q8VFN4 314 aa13.07□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Ndufa2Q9CQ75 99 aa13.07□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Hs3st3b1Q9QZS6 390 aa13.07□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 1700031F05RikB1AX30 191 aa13.07□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 S100a4P07091 101 aa13.07□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Gvin1Q80SU7 2427 aa13.06□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Dnajc13D4AFX7 2248 aaKnown RBP13.06□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Gm45753A0A1C7CYU8 86 aa13.06□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Scgb1b19F6WYW0 93 aa13.06□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Mex3bQ69Z36 601 aaKnown RBP13.06□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Dirc2Q8BFQ6 478 aa13.06□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 DnlzQ9D113 177 aa13.06□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Ighv1-76A0A0G2JFE9 117 aa13.06□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Siglec15A7E1W8 342 aa13.06□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Mrpl27Q99N92 148 aa13.06□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Cbln1Q9R171 193 aa13.06□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Iglv3A0A0B4J1K5 122 aa13.06□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Vmn1r232A2RTT5 351 aa13.06□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 P01759 136 aa13.06□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Psg27Q497W2 474 aa13.06□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Olfr148Q60887 310 aa13.06□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Olfr823Q7TRH2 315 aa13.06□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Ighv9-2A0A0B4J1J4 117 aa13.06□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Rpl8P62918 257 aaKnown RBP13.06□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Nabp2Q8R2Y9 212 aa13.06□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Shisal2bQ9D1Y9 158 aa13.06□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 MyofQ69ZN7 2048 aaKnown RBP13.05□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Sc5dO88822 299 aa13.05□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Defa-rs12P50716 91 aa13.05□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Defa-rs10Q64263 91 aa13.05□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Cd200r1lQ6XJV6 249 aa13.05□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 PtprsB0V2N1 1907 aa13.05□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 C1ql4Q4ZJM9 238 aa13.05□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Prss35Q8C0F9 409 aa13.05□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Olfr982Q8VGB3 321 aa13.05□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Olfr481Q8VGI5 312 aa13.05□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Ighv14-2A0A075B5R7 117 aa13.05□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Ighv9-1A0A0B4J1P3 117 aa13.05□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 G0s2Q61585 103 aa13.05□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 RetnlgQ8K426 117 aa13.05□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Pmaip1Q9JM54 103 aa13.05□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Wnt16Q9QYS1 364 aa13.05□□□□□ -0.32
Ccdc88b-201ENSMUST00000113440 Egr4Q9WUF2 478 aa13.05□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 54.8 ms