RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 TRAV12-3A0A0B4J271 114 aa6.83□□□□□ -1.32
PHGDH-228ENST00000641847 TRAV21A0A0B4J279 112 aa6.83□□□□□ -1.32
PHGDH-228ENST00000641847 KIR2DL5BA0A0G2JN68 375 aa6.83□□□□□ -1.32
PHGDH-228ENST00000641847 KIR2DL5BA0A0G2JPC4 375 aa6.83□□□□□ -1.32
PHGDH-228ENST00000641847 CXorf65A6NEN9 183 aa6.83□□□□□ -1.32
PHGDH-228ENST00000641847 M0R036 132 aa6.83□□□□□ -1.32
PHGDH-228ENST00000641847 ATP6V1G1O75348 118 aa6.83□□□□□ -1.32
PHGDH-228ENST00000641847 APOC3P02656 99 aa6.83□□□□□ -1.32
PHGDH-228ENST00000641847 PFN1P07737 140 aaKnown RBP6.83□□□□□ -1.32
PHGDH-228ENST00000641847 GIG44P09565 113 aaPredicted RBP6.83□□□□□ -1.32
PHGDH-228ENST00000641847 RBMY1A1P0DJD3 496 aaKnown RBP6.83□□□□□ -1.32
PHGDH-228ENST00000641847 RBMY1CP0DJD4 496 aa6.83□□□□□ -1.32
PHGDH-228ENST00000641847 CRIP1P50238 77 aa6.83□□□□□ -1.32
PHGDH-228ENST00000641847 RBMY1FQ15415 496 aaKnown RBP6.83□□□□□ -1.32
PHGDH-228ENST00000641847 Q6AWC8 147 aa6.83□□□□□ -1.32
PHGDH-228ENST00000641847 LINC00322Q6ZN03 302 aaPredicted RBP6.83□□□□□ -1.32
PHGDH-228ENST00000641847 KIR2DL5AQ8N109 375 aa6.83□□□□□ -1.32
PHGDH-228ENST00000641847 KIR2DL5BQ8NHK3 375 aa6.83□□□□□ -1.32
PHGDH-228ENST00000641847 ISOC2Q96AB3 205 aa6.83□□□□□ -1.32
PHGDH-228ENST00000641847 C1QTNF4Q9BXJ3 329 aa6.83□□□□□ -1.32
PHGDH-228ENST00000641847 NAGKQ9UJ70 344 aa6.83□□□□□ -1.32
PHGDH-228ENST00000641847 C19orf71A6NCJ1 209 aa6.82□□□□□ -1.32
PHGDH-228ENST00000641847 NUPR2A6NF83 97 aa6.82□□□□□ -1.32
PHGDH-228ENST00000641847 ERVFC1-1P60608 527 aa6.82□□□□□ -1.32
PHGDH-228ENST00000641847 Q6ZQT7 251 aa6.82□□□□□ -1.32
PHGDH-228ENST00000641847 RNASE7Q9H1E1 156 aaKnown RBP6.82□□□□□ -1.32
PHGDH-228ENST00000641847 FABP5P3A8MUU1 101 aa6.81□□□□□ -1.32
PHGDH-228ENST00000641847 ZNF324O75467 553 aaPredicted RBP6.81□□□□□ -1.32
PHGDH-228ENST00000641847 P01737 135 aa6.81□□□□□ -1.32
PHGDH-228ENST00000641847 MUC21Q5SSG8 566 aa6.81□□□□□ -1.32
PHGDH-228ENST00000641847 IBA57Q5T440 356 aaKnown RBP6.81□□□□□ -1.32
PHGDH-228ENST00000641847 C1orf158Q8N1D5 194 aa6.81□□□□□ -1.32
PHGDH-228ENST00000641847 SVBPQ8N300 66 aa6.81□□□□□ -1.32
PHGDH-228ENST00000641847 DAZAP1Q96EP5 407 aaKnown RBP6.81□□□□□ -1.32
PHGDH-228ENST00000641847 SFRP2Q96HF1 295 aa6.81□□□□□ -1.32
PHGDH-228ENST00000641847 C20orf144Q9BQM9 153 aa6.81□□□□□ -1.32
PHGDH-228ENST00000641847 C11orf21Q9P2W6 132 aa6.81□□□□□ -1.32
PHGDH-228ENST00000641847 KLK5Q9Y337 293 aaPredicted RBP6.81□□□□□ -1.32
PHGDH-228ENST00000641847 GOLT1BQ9Y3E0 138 aa6.81□□□□□ -1.32
PHGDH-228ENST00000641847 IGHV3OR16-12A0A075B7B8 117 aa6.8□□□□□ -1.32
PHGDH-228ENST00000641847 TMSB15BA0A087X1C1 80 aa6.8□□□□□ -1.32
PHGDH-228ENST00000641847 H7BYZ3 331 aa6.8□□□□□ -1.32
PHGDH-228ENST00000641847 UBE2CO00762 179 aa6.8□□□□□ -1.32
PHGDH-228ENST00000641847 ORM1P02763 201 aa6.8□□□□□ -1.32
PHGDH-228ENST00000641847 MED14OSP0DP75 135 aa6.8□□□□□ -1.32
PHGDH-228ENST00000641847 RPL19P84098 196 aaKnown RBP6.8□□□□□ -1.32
PHGDH-228ENST00000641847 DEFB135Q30KP9 77 aa6.8□□□□□ -1.32
PHGDH-228ENST00000641847 ANXA2RQ3ZCQ2 193 aa6.8□□□□□ -1.32
PHGDH-228ENST00000641847 FAM231DQ6ZW35 169 aa6.8□□□□□ -1.32
PHGDH-228ENST00000641847 TMEM256Q8N2U0 113 aa6.8□□□□□ -1.32
PHGDH-228ENST00000641847 C15orf54Q8N8G6 183 aa6.8□□□□□ -1.32
PHGDH-228ENST00000641847 CSNK1G2-AS1Q8NCQ2 148 aa6.8□□□□□ -1.32
PHGDH-228ENST00000641847 CLRN3Q8NCR9 226 aa6.8□□□□□ -1.32
PHGDH-228ENST00000641847 NUDT10Q8NFP7 164 aa6.8□□□□□ -1.32
PHGDH-228ENST00000641847 OR2D3Q8NGH3 330 aa6.8□□□□□ -1.32
PHGDH-228ENST00000641847 NUDT11Q96G61 164 aa6.8□□□□□ -1.32
PHGDH-228ENST00000641847 TMEM208Q9BTX3 173 aa6.8□□□□□ -1.32
PHGDH-228ENST00000641847 RPP21Q9H633 154 aaKnown RBP6.8□□□□□ -1.32
PHGDH-228ENST00000641847 OSTCQ9NRP0 149 aa6.8□□□□□ -1.32
PHGDH-228ENST00000641847 IGHV1OR15-1A0A075B7D0 117 aa6.79□□□□□ -1.32
PHGDH-228ENST00000641847 IGKV3D-20A0A0C4DH25 116 aa6.79□□□□□ -1.32
PHGDH-228ENST00000641847 TMEM189A5PLL7 270 aa6.79□□□□□ -1.32
PHGDH-228ENST00000641847 ZNF705GA8MUZ8 300 aaPredicted RBP6.79□□□□□ -1.32
PHGDH-228ENST00000641847 B4DEV8 164 aa6.79□□□□□ -1.32
PHGDH-228ENST00000641847 GATCO43716 136 aaKnown RBP6.79□□□□□ -1.32
PHGDH-228ENST00000641847 SNAPINO95295 136 aa6.79□□□□□ -1.32
PHGDH-228ENST00000641847 RHEBQ15382 184 aa6.79□□□□□ -1.32
PHGDH-228ENST00000641847 RNF212Q495C1 297 aa6.79□□□□□ -1.32
PHGDH-228ENST00000641847 LCE2DQ5TA82 110 aaPredicted RBP6.79□□□□□ -1.32
PHGDH-228ENST00000641847 FAM159AQ6UWV7 190 aa6.79□□□□□ -1.32
PHGDH-228ENST00000641847 OR10G8Q8NGN5 311 aa6.79□□□□□ -1.32
PHGDH-228ENST00000641847 LINC01587Q99440 93 aa6.79□□□□□ -1.32
PHGDH-228ENST00000641847 PYGO2Q9BRQ0 406 aa6.79□□□□□ -1.32
PHGDH-228ENST00000641847 RETNQ9HD89 108 aa6.79□□□□□ -1.32
PHGDH-228ENST00000641847 PGPEP1Q9NXJ5 209 aa6.79□□□□□ -1.32
PHGDH-228ENST00000641847 CBY3A6NI87 242 aa6.78□□□□□ -1.32
PHGDH-228ENST00000641847 MT-ND4LP03901 98 aa6.78□□□□□ -1.32
PHGDH-228ENST00000641847 TYMSP04818 313 aa6.78□□□□□ -1.32
PHGDH-228ENST00000641847 HTN1P15515 57 aa6.78□□□□□ -1.32
PHGDH-228ENST00000641847 ZNF705AQ6ZN79 300 aaPredicted RBP6.78□□□□□ -1.32
PHGDH-228ENST00000641847 Q6ZWC4 215 aa6.78□□□□□ -1.32
PHGDH-228ENST00000641847 KCNS1Q96KK3 526 aa6.78□□□□□ -1.32
PHGDH-228ENST00000641847 LINC00467Q9BRT7 94 aa6.78□□□□□ -1.32
PHGDH-228ENST00000641847 V9GYV3 84 aa6.78□□□□□ -1.32
PHGDH-228ENST00000641847 TRGV11A0A075B6L2 103 aa6.77□□□□□ -1.33
PHGDH-228ENST00000641847 C7orf77A4D0Y5 90 aa6.77□□□□□ -1.33
PHGDH-228ENST00000641847 GRIFINA4D1Z8 144 aa6.77□□□□□ -1.33
PHGDH-228ENST00000641847 PPP1R2P9O14990 202 aa6.77□□□□□ -1.33
PHGDH-228ENST00000641847 GZMBP10144 247 aa6.77□□□□□ -1.33
PHGDH-228ENST00000641847 RPS20P60866 119 aaKnown RBP6.77□□□□□ -1.33
PHGDH-228ENST00000641847 TDRG1Q3Y452 100 aa6.77□□□□□ -1.33
PHGDH-228ENST00000641847 CT83Q5H943 113 aa6.77□□□□□ -1.33
PHGDH-228ENST00000641847 CEMP1Q6PRD7 247 aaPredicted RBP6.77□□□□□ -1.33
PHGDH-228ENST00000641847 RNF183Q96D59 192 aa6.77□□□□□ -1.33
PHGDH-228ENST00000641847 ANAPC16Q96DE5 110 aa6.77□□□□□ -1.33
PHGDH-228ENST00000641847 KRTAP3-3Q9BYR6 98 aa6.77□□□□□ -1.33
PHGDH-228ENST00000641847 KRTAP3-2Q9BYR7 98 aa6.77□□□□□ -1.33
PHGDH-228ENST00000641847 TP53TG3Q9ULZ0 132 aa6.77□□□□□ -1.33
PHGDH-228ENST00000641847 VPS13DQ5THJ4 4388 aa6.76□□□□□ -1.33
PHGDH-228ENST00000641847 IGHV3-16A0A0C4DH30 117 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms