RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 EEF1AKMT3Q96AZ1 226 aa12.65□□□□□ -0.38
HNRNPU-228ENST00000640306 HIF1ANQ9NWT6 349 aa12.65□□□□□ -0.38
HNRNPU-228ENST00000640306 TRBV12-3P01733 135 aa12.65□□□□□ -0.39
HNRNPU-228ENST00000640306 SMIM13P0DJ93 91 aa12.65□□□□□ -0.39
HNRNPU-228ENST00000640306 UBE2E1P51965 193 aa12.65□□□□□ -0.39
HNRNPU-228ENST00000640306 NRACQ8N912 160 aa12.65□□□□□ -0.39
HNRNPU-228ENST00000640306 MYOZ3Q8TDC0 251 aa12.65□□□□□ -0.39
HNRNPU-228ENST00000640306 C20orf173Q96LM9 149 aa12.65□□□□□ -0.39
HNRNPU-228ENST00000640306 IGSF10Q6WRI0 2623 aa12.64□□□□□ -0.39
HNRNPU-228ENST00000640306 RPL11P62913 178 aaKnown RBP12.64□□□□□ -0.39
HNRNPU-228ENST00000640306 SRSF2Q01130 221 aaKnown RBP12.64□□□□□ -0.39
HNRNPU-228ENST00000640306 LAGE3Q14657 143 aa12.64□□□□□ -0.39
HNRNPU-228ENST00000640306 BRD3OSQ6XYD6 125 aa12.64□□□□□ -0.39
HNRNPU-228ENST00000640306 ZMAT4Q9H898 229 aa12.64□□□□□ -0.39
HNRNPU-228ENST00000640306 CENPVL3A0A0U1RRI6 287 aa12.63□□□□□ -0.39
HNRNPU-228ENST00000640306 FABP2P12104 132 aa12.63□□□□□ -0.39
HNRNPU-228ENST00000640306 UNQ9165/PRO28630Q6UXU0 137 aa12.63□□□□□ -0.39
HNRNPU-228ENST00000640306 RAB9AP51151 201 aa12.63□□□□□ -0.39
HNRNPU-228ENST00000640306 CRYBG3Q68DQ2 2970 aa12.63□□□□□ -0.39
HNRNPU-228ENST00000640306 RBAKDNA6NC62 111 aa12.62□□□□□ -0.39
HNRNPU-228ENST00000640306 F6UB75 175 aa12.62□□□□□ -0.39
HNRNPU-228ENST00000640306 IGHV3-11P01762 117 aa12.62□□□□□ -0.39
HNRNPU-228ENST00000640306 ATP5G2Q06055 141 aa12.62□□□□□ -0.39
HNRNPU-228ENST00000640306 LCNL1Q6ZST4 164 aa12.62□□□□□ -0.39
HNRNPU-228ENST00000640306 RPL24P83731 157 aaKnown RBP12.62□□□□□ -0.39
HNRNPU-228ENST00000640306 GNLYP22749 145 aa12.61□□□□□ -0.39
HNRNPU-228ENST00000640306 NPFFO15130 113 aa12.61□□□□□ -0.39
HNRNPU-228ENST00000640306 ATP5LO75964 103 aa12.61□□□□□ -0.39
HNRNPU-228ENST00000640306 C14orf178Q8N769 122 aaPredicted RBP12.61□□□□□ -0.39
HNRNPU-228ENST00000640306 RPL39LQ96EH5 51 aaKnown RBP12.61□□□□□ -0.39
HNRNPU-228ENST00000640306 CELSR2Q9HCU4 2923 aa12.61□□□□□ -0.39
HNRNPU-228ENST00000640306 USP24Q9UPU5 2620 aa12.61□□□□□ -0.39
HNRNPU-228ENST00000640306 S100A4P26447 101 aaKnown RBP12.61□□□□□ -0.39
HNRNPU-228ENST00000640306 LINC01546A6NGU7 62 aa12.6□□□□□ -0.39
HNRNPU-228ENST00000640306 LY6EQ16553 131 aa12.6□□□□□ -0.39
HNRNPU-228ENST00000640306 C5orf56Q8N8D9 126 aa12.6□□□□□ -0.39
HNRNPU-228ENST00000640306 WFDC12Q8WWY7 111 aa12.6□□□□□ -0.39
HNRNPU-228ENST00000640306 MGPP08493 103 aa12.6□□□□□ -0.39
HNRNPU-228ENST00000640306 SRD5A1P18405 259 aa12.6□□□□□ -0.39
HNRNPU-228ENST00000640306 MTURNQ8N3F0 131 aa12.6□□□□□ -0.39
HNRNPU-228ENST00000640306 NEGR1Q7Z3B1 354 aa12.59□□□□□ -0.39
HNRNPU-228ENST00000640306 CSTL1Q9H114 145 aa12.59□□□□□ -0.39
HNRNPU-228ENST00000640306 TRBV7-1A0A0A6YYK4 115 aa12.59□□□□□ -0.39
HNRNPU-228ENST00000640306 ARL3P36405 182 aa12.59□□□□□ -0.39
HNRNPU-228ENST00000640306 LMO4P61968 165 aa12.59□□□□□ -0.39
HNRNPU-228ENST00000640306 C9orf47Q6ZRZ4 202 aa12.59□□□□□ -0.39
HNRNPU-228ENST00000640306 NPFFR1Q9GZQ6 430 aa12.59□□□□□ -0.39
HNRNPU-228ENST00000640306 TRAV41A0A0B4J266 112 aa12.58□□□□□ -0.39
HNRNPU-228ENST00000640306 CSPG4Q6UVK1 2322 aa12.58□□□□□ -0.4
HNRNPU-228ENST00000640306 SRSF1Q07955 248 aaKnown RBP eCLIP12.58□□□□□ -0.48e-8■□□□□ 11.2
HNRNPU-228ENST00000640306 CEND1Q8N111 149 aa12.58□□□□□ -0.4
HNRNPU-228ENST00000640306 ABCA2Q9BZC7 2435 aa12.58□□□□□ -0.4
HNRNPU-228ENST00000640306 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.57□□□□□ -0.4
HNRNPU-228ENST00000640306 GNRH2O43555 120 aa12.57□□□□□ -0.4
HNRNPU-228ENST00000640306 RNASE4P34096 147 aaKnown RBP12.57□□□□□ -0.4
HNRNPU-228ENST00000640306 HIST1H4GQ99525 98 aa12.57□□□□□ -0.4
HNRNPU-228ENST00000640306 SMIM2Q9BVW6 85 aa12.57□□□□□ -0.4
HNRNPU-228ENST00000640306 A0A087WX48 190 aa12.57□□□□□ -0.4
HNRNPU-228ENST00000640306 SCGB3A1Q96QR1 104 aa12.57□□□□□ -0.4
HNRNPU-228ENST00000640306 G3V4G9 280 aa12.56□□□□□ -0.4
HNRNPU-228ENST00000640306 AMTNQ6UX39 209 aa12.56□□□□□ -0.4
HNRNPU-228ENST00000640306 HIGD1BQ9P298 99 aa12.56□□□□□ -0.4
HNRNPU-228ENST00000640306 SMPXQ9UHP9 88 aa12.56□□□□□ -0.4
HNRNPU-228ENST00000640306 PHLDA3Q9Y5J5 127 aa12.56□□□□□ -0.4
HNRNPU-228ENST00000640306 ANXA2RQ3ZCQ2 193 aa12.56□□□□□ -0.4
HNRNPU-228ENST00000640306 GPHB5Q86YW7 130 aa12.56□□□□□ -0.4
HNRNPU-228ENST00000640306 OR5A1Q8NGJ0 315 aa12.56□□□□□ -0.4
HNRNPU-228ENST00000640306 PIFOQ8TCI5 191 aa12.56□□□□□ -0.4
HNRNPU-228ENST00000640306 TEX48A0A1B0GUV7 120 aa12.55□□□□□ -0.4
HNRNPU-228ENST00000640306 PHLDA1Q8WV24 401 aaPredicted RBP12.55□□□□□ -0.4
HNRNPU-228ENST00000640306 RASL10AQ92737 203 aa12.55□□□□□ -0.4
HNRNPU-228ENST00000640306 U3KQE9 123 aa12.55□□□□□ -0.4
HNRNPU-228ENST00000640306 EPG5Q9HCE0 2579 aa12.55□□□□□ -0.4
HNRNPU-228ENST00000640306 ZFAND2AQ8N6M9 145 aa12.55□□□□□ -0.4
HNRNPU-228ENST00000640306 EMP1P54849 157 aa12.55□□□□□ -0.4
HNRNPU-228ENST00000640306 SORL1Q92673 2214 aa12.54□□□□□ -0.4
HNRNPU-228ENST00000640306 PRB1P04280 392 aa12.54□□□□□ -0.4
HNRNPU-228ENST00000640306 EDN2P20800 178 aa12.54□□□□□ -0.4
HNRNPU-228ENST00000640306 SUMO2P61956 95 aaKnown RBP12.54□□□□□ -0.4
HNRNPU-228ENST00000640306 OR10J6PQ8NGY7 276 aa12.54□□□□□ -0.4
HNRNPU-228ENST00000640306 CSMD2Q7Z408 3487 aa12.54□□□□□ -0.4
HNRNPU-228ENST00000640306 DOPEY2Q9Y3R5 2298 aa12.54□□□□□ -0.4
HNRNPU-228ENST00000640306 CYSLTR1Q9Y271 337 aa12.54□□□□□ -0.4
HNRNPU-228ENST00000640306 CHTOPQ9Y3Y2 248 aaKnown RBP12.53□□□□□ -0.4
HNRNPU-228ENST00000640306 FLNCQ14315 2725 aa12.53□□□□□ -0.4
HNRNPU-228ENST00000640306 H3BMG7 143 aa12.53□□□□□ -0.4
HNRNPU-228ENST00000640306 C19orf84I3L1E1 186 aa12.53□□□□□ -0.4
HNRNPU-228ENST00000640306 SFTA2Q6UW10 78 aa12.53□□□□□ -0.4
HNRNPU-228ENST00000640306 Q6ZS46 218 aa12.53□□□□□ -0.4
HNRNPU-228ENST00000640306 C9orf139Q6ZV77 190 aa12.53□□□□□ -0.4
HNRNPU-228ENST00000640306 ITLN2Q8WWU7 325 aaPredicted RBP12.53□□□□□ -0.4
HNRNPU-228ENST00000640306 MOB4Q9Y3A3 225 aa12.53□□□□□ -0.4
HNRNPU-228ENST00000640306 CREBBPQ92793 2442 aa12.52□□□□□ -0.4
HNRNPU-228ENST00000640306 MRPL53Q96EL3 112 aaKnown RBP12.52□□□□□ -0.4
HNRNPU-228ENST00000640306 ZNF479Q96JC4 524 aa12.52□□□□□ -0.4
HNRNPU-228ENST00000640306 TM2D2Q9BX73 214 aa12.52□□□□□ -0.4
HNRNPU-228ENST00000640306 IGLL5B9A064 214 aa12.52□□□□□ -0.41
HNRNPU-228ENST00000640306 F8VRH5 84 aa12.52□□□□□ -0.41
HNRNPU-228ENST00000640306 PF4V1P10720 104 aa12.52□□□□□ -0.41
HNRNPU-228ENST00000640306 ASIPP42127 132 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms